BLASTX nr result

ID: Bupleurum21_contig00030972 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030972
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314297.1| ABC transporter family protein [Populus tric...    80   2e-13
dbj|BAA94511.1| ABC transporter homolog [Populus nigra]                78   7e-13
ref|XP_002523695.1| ATP-dependent transporter, putative [Ricinus...    78   9e-13
ref|XP_002331473.1| ABC transporter family protein [Populus tric...    77   1e-12
ref|XP_004145757.1| PREDICTED: ABC transporter F family member 1...    77   2e-12

>ref|XP_002314297.1| ABC transporter family protein [Populus trichocarpa]
           gi|222850705|gb|EEE88252.1| ABC transporter family
           protein [Populus trichocarpa]
          Length = 599

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 37/44 (84%), Positives = 42/44 (95%)
 Frame = +2

Query: 137 SNSSGVDKVANGVGAMQISDRTCTGVLCSHPLSRDIRIESLSLT 268
           S + GVDK++NGVGA+QISDRTCTGVLCSHPLSRDIRIESLS+T
Sbjct: 38  SQNGGVDKLSNGVGALQISDRTCTGVLCSHPLSRDIRIESLSVT 81


>dbj|BAA94511.1| ABC transporter homolog [Populus nigra]
          Length = 565

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 36/44 (81%), Positives = 41/44 (93%)
 Frame = +2

Query: 137 SNSSGVDKVANGVGAMQISDRTCTGVLCSHPLSRDIRIESLSLT 268
           S + GVDK++NG GA+QISDRTCTGVLCSHPLSRDIRIESLS+T
Sbjct: 42  SQNEGVDKLSNGFGALQISDRTCTGVLCSHPLSRDIRIESLSVT 85


>ref|XP_002523695.1| ATP-dependent transporter, putative [Ricinus communis]
           gi|223536999|gb|EEF38635.1| ATP-dependent transporter,
           putative [Ricinus communis]
          Length = 600

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 35/44 (79%), Positives = 42/44 (95%)
 Frame = +2

Query: 137 SNSSGVDKVANGVGAMQISDRTCTGVLCSHPLSRDIRIESLSLT 268
           +++  VDK++NG+GAMQISDRTCTGVLCSHPLSRDIRIESLS+T
Sbjct: 39  ADNGSVDKLSNGIGAMQISDRTCTGVLCSHPLSRDIRIESLSVT 82


>ref|XP_002331473.1| ABC transporter family protein [Populus trichocarpa]
           gi|222873551|gb|EEF10682.1| ABC transporter family
           protein [Populus trichocarpa]
          Length = 602

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 35/44 (79%), Positives = 40/44 (90%)
 Frame = +2

Query: 137 SNSSGVDKVANGVGAMQISDRTCTGVLCSHPLSRDIRIESLSLT 268
           S + GVDK++NG G +QISDRTCTGVLCSHPLSRDIRIESLS+T
Sbjct: 41  SQNEGVDKLSNGAGVLQISDRTCTGVLCSHPLSRDIRIESLSVT 84


>ref|XP_004145757.1| PREDICTED: ABC transporter F family member 1-like [Cucumis sativus]
           gi|449526339|ref|XP_004170171.1| PREDICTED: ABC
           transporter F family member 1-like [Cucumis sativus]
          Length = 601

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 35/43 (81%), Positives = 41/43 (95%)
 Frame = +2

Query: 140 NSSGVDKVANGVGAMQISDRTCTGVLCSHPLSRDIRIESLSLT 268
           + +GVDK+ANGV A+Q+SDRTCTGVLCSHPLSRDIRIESLS+T
Sbjct: 41  SQNGVDKLANGVDALQLSDRTCTGVLCSHPLSRDIRIESLSVT 83


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