BLASTX nr result

ID: Bupleurum21_contig00030967 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030967
         (942 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273340.1| PREDICTED: uncharacterized protein LOC100245...   175   2e-41
emb|CBI30461.3| unnamed protein product [Vitis vinifera]              163   5e-38
ref|XP_002534178.1| hypothetical protein RCOM_0303160 [Ricinus c...   155   1e-35
ref|XP_002308193.1| predicted protein [Populus trichocarpa] gi|2...   146   8e-33
ref|XP_002322936.1| predicted protein [Populus trichocarpa] gi|2...   135   2e-29

>ref|XP_002273340.1| PREDICTED: uncharacterized protein LOC100245981 [Vitis vinifera]
          Length = 897

 Score =  175 bits (443), Expect = 2e-41
 Identities = 119/319 (37%), Positives = 171/319 (53%), Gaps = 8/319 (2%)
 Frame = -1

Query: 942  HSCPFPA--SVATKVDSDTEHINYAKSQEVKQFDECRIHQRSINIRNPSSEGKY--LEVS 775
            HSCP P    + TK D   + +N  +  E+   + C +   S       SEG+     ++
Sbjct: 357  HSCPLPCREELYTKSDMKPQSMNITQGMELPS-NACHMSPCSREKPTMQSEGRSETKPMN 415

Query: 774  SSTPETLRRSDQDHGRRPNAKGRHTSPHRRFNFGSIGRMTKSFSFKDISALPHSNSSSIK 595
            S+  E  ++ D +      AKGR+ SP+RRF  G + RM++SFSFK+ SALP  +S+ + 
Sbjct: 416  SAVIEMSKKQDLE-----TAKGRNPSPNRRFTLG-LARMSRSFSFKEGSALPQLSSTYVT 469

Query: 594  AKCGPVGSLTFVDSKKFNQDNAIGGNGARSSXXXXXXXXXXXXR----VHSAELVQPLKI 427
             + GP  S +   S   +++ A   + ARSS            +    + SAE VQ L+ 
Sbjct: 470  VRSGPAKSESSACSVNSSREKANANSRARSSPLRRLLDPLLRPKAANLLQSAETVQALEG 529

Query: 426  NIDPVNIKPVDITELHQSRDCETSCVQALLQLTLKNGLPLFKLVVDNSSDIFAAAVKKLP 247
            ++     +P+D  E   +   E S +QA+LQLT+KNGLPLFK VV+N S I AA VK+L 
Sbjct: 530  SL----CRPLDFCESLHNEKHEASTIQAVLQLTMKNGLPLFKFVVNNKSTILAATVKELT 585

Query: 246  MPGEDVPSLIYALYSVHETKMKSGNWMXXXXXXXXXXXGYNIIGQIKVSAPHPPGLRSQN 67
              G+D  S IY  YSVH+ K KSG+WM            YN++GQ+ VS+ H      QN
Sbjct: 586  ASGKDDSSWIYTFYSVHKIKKKSGSWMSQGSKGNSSSYVYNVVGQMNVSSSHFTE-SEQN 644

Query: 66   KNDQYTVRESILYGVDSGQ 10
              +QYTV+ES+L GVD  Q
Sbjct: 645  LKNQYTVKESVLVGVDLRQ 663


>emb|CBI30461.3| unnamed protein product [Vitis vinifera]
          Length = 855

 Score =  163 bits (413), Expect = 5e-38
 Identities = 113/313 (36%), Positives = 162/313 (51%), Gaps = 6/313 (1%)
 Frame = -1

Query: 942  HSCPFPA--SVATKVDSDTEHINYAKSQEVKQFDECRIHQRSINIRNPSSEGKYLEVSSS 769
            HSCP P    + TK D   + +N  +  E+                 PS+      +S S
Sbjct: 357  HSCPLPCREELYTKSDMKPQSMNITQGMEL-----------------PSNA---CHMSPS 396

Query: 768  TPETLRRSDQDHGRRPNAKGRHTSPHRRFNFGSIGRMTKSFSFKDISALPHSNSSSIKAK 589
              E  ++ D +      AKGR+ SP+RRF  G + RM++SFSFK+ SALP  +S+ +  +
Sbjct: 397  VIEMSKKQDLE-----TAKGRNPSPNRRFTLG-LARMSRSFSFKEGSALPQLSSTYVTVR 450

Query: 588  CGPVGSLTFVDSKKFNQDNAIGGNGARSSXXXXXXXXXXXXR----VHSAELVQPLKINI 421
             GP  S +   S   +++ A   + ARSS            +    + SAE VQ L+ ++
Sbjct: 451  SGPAKSESSACSVNSSREKANANSRARSSPLRRLLDPLLRPKAANLLQSAETVQALEGSL 510

Query: 420  DPVNIKPVDITELHQSRDCETSCVQALLQLTLKNGLPLFKLVVDNSSDIFAAAVKKLPMP 241
                 +P+D  E   +   E S +QA+LQLT+KNGLPLFK VV+N S I AA VK+L   
Sbjct: 511  ----CRPLDFCESLHNEKHEASTIQAVLQLTMKNGLPLFKFVVNNKSTILAATVKELTAS 566

Query: 240  GEDVPSLIYALYSVHETKMKSGNWMXXXXXXXXXXXGYNIIGQIKVSAPHPPGLRSQNKN 61
            G+D  S IY  YSVH+ K KSG+WM            YN++GQ+ VS+ H      QN  
Sbjct: 567  GKDDSSWIYTFYSVHKIKKKSGSWMSQGSKGNSSSYVYNVVGQMNVSSSHFTE-SEQNLK 625

Query: 60   DQYTVRESILYGV 22
            +QYTV+ES+L  +
Sbjct: 626  NQYTVKESVLVAI 638


>ref|XP_002534178.1| hypothetical protein RCOM_0303160 [Ricinus communis]
            gi|223525738|gb|EEF28202.1| hypothetical protein
            RCOM_0303160 [Ricinus communis]
          Length = 937

 Score =  155 bits (392), Expect = 1e-35
 Identities = 101/315 (32%), Positives = 155/315 (49%), Gaps = 4/315 (1%)
 Frame = -1

Query: 942  HSCPFPASVATKVDSDTEHINYAKSQEVKQFDECRIHQRSINIRNPSSEGKYLEVSSSTP 763
            HSCP P+      +      N   + +V+      +   + +  N S+E           
Sbjct: 413  HSCPLPSRAEINTEQQEMAPNAFNNHDVE------LSSNASSSANSSNENLL-------- 458

Query: 762  ETLRRSDQDHGRRPNAKGRHTSPHRRFNFGSIGRMTKSFSFKDISALPHSNSSSIKAKCG 583
            ETLR  DQ+     + KGRH SP+RRF+F S+GRMT+SFSFK+ S +P   S+ +  K G
Sbjct: 459  ETLRTLDQETAELDSRKGRHPSPNRRFSF-SLGRMTRSFSFKETSGIPQLTSTYVSVKSG 517

Query: 582  PVGSLTFVDSKKFNQDNAIGGNGARSSXXXXXXXXXXXXR----VHSAELVQPLKINIDP 415
            PV S    D    N++ A G N ARSS            +     +S+   Q    + + 
Sbjct: 518  PVISKASADLGNSNREKASGHNRARSSPLRRILDPLLKSKGSNLQNSSGTDQSSSGSPNA 577

Query: 414  VNIKPVDITELHQSRDCETSCVQALLQLTLKNGLPLFKLVVDNSSDIFAAAVKKLPMPGE 235
             + K +D TE  Q+   E S +QA L +T  NG PLF+ V++N + I AA +K L    +
Sbjct: 578  HSYKTIDATESLQNEKHELSSIQAHLMVTRSNGFPLFRFVINNKNIIVAAPLKNLTPMAK 637

Query: 234  DVPSLIYALYSVHETKMKSGNWMXXXXXXXXXXXGYNIIGQIKVSAPHPPGLRSQNKNDQ 55
            +     Y LY++ E K K G+W+            YN++GQ+KV+      L  +N +++
Sbjct: 638  NDQGCNYVLYAIDEMKRKGGSWITQVGKEKSCSFVYNVVGQMKVNGSSFLDLSGKNSSNE 697

Query: 54   YTVRESILYGVDSGQ 10
            Y V+ES+L+G +  Q
Sbjct: 698  YVVKESVLFGTERRQ 712


>ref|XP_002308193.1| predicted protein [Populus trichocarpa] gi|222854169|gb|EEE91716.1|
            predicted protein [Populus trichocarpa]
          Length = 979

 Score =  146 bits (368), Expect = 8e-33
 Identities = 101/276 (36%), Positives = 143/276 (51%), Gaps = 10/276 (3%)
 Frame = -1

Query: 801  SEGKYLEVSS------STPETLRRSDQDHGRRPNAKGRHTSPHRRFNFGSIGRMTKSFSF 640
            SE K+   SS      S  ET    DQ+       KGRH SP+RRF+F S+ RM++SFSF
Sbjct: 471  SEDKFAGESSGRAAKGSVIETSNTLDQETMEVMARKGRHPSPNRRFSF-SLSRMSRSFSF 529

Query: 639  KDISALPHSNSSSIKAKCGPVGSLTFVDSKKFNQDNAIGGNGARSSXXXXXXXXXXXXRV 460
            K+ S +P  +S+ I  K GPV S  F      N++ A G N ARSS            R 
Sbjct: 530  KESSTVPQLSSTYISTKSGPVISEGFACLDNSNREKASGHNRARSSPLRRMLDPLLKSRS 589

Query: 459  HSAELV---QPLKINIDPVNIKPVDITELHQSRDCETSCVQALLQLTLKNGLPLFKLVVD 289
                L      LK +++  N+K  D TE  +    E   ++ALLQLT++NG+PLF+  V 
Sbjct: 590  SRTLLSAENDSLKDSLNSFNLKRFDATEPLKDEKHEPPRIKALLQLTIRNGVPLFRFAVG 649

Query: 288  NSSDIFAAAVKKLPMPGEDVPSLIYALYSVHETKMKSGNWMXXXXXXXXXXXGYNIIGQI 109
            N+S+I AA + KL  P ++     Y  Y++ E K KSG+W+            YN+IG++
Sbjct: 650  NNSNILAATMNKLSAPQKNDSGCDYTFYTIDEIKKKSGSWINQGSKEKSCGYIYNVIGRM 709

Query: 108  KV-SAPHPPGLRSQNKNDQYTVRESILYGVDSGQED 4
            KV ++     L   +   Q  V+ES+L+GVD  Q D
Sbjct: 710  KVNNSSSISALTGPSSICQIKVKESVLFGVDLSQAD 745


>ref|XP_002322936.1| predicted protein [Populus trichocarpa] gi|222867566|gb|EEF04697.1|
            predicted protein [Populus trichocarpa]
          Length = 1005

 Score =  135 bits (339), Expect = 2e-29
 Identities = 102/325 (31%), Positives = 151/325 (46%), Gaps = 12/325 (3%)
 Frame = -1

Query: 942  HSCPFPASVATKVDSDTE-HINYAKSQEVKQFDECRIHQRSINIRNPSSEGKYLEVS--- 775
            HSCP  +   T  +     H            D  R    S  +    SE K+ E S   
Sbjct: 452  HSCPLLSRNKTNTEPHKVLHTAMVTQSAEMSSDASRTSACSYKMPIRLSEDKFAEESRVR 511

Query: 774  ---SSTPETLRRSDQDHGRRPNAKGRHTSPHRRFNFGSIGRMTKSFSFKDISALPHSNSS 604
                S  ET    DQ+       K RH  P+R F+F S+ RM++SFSFK+ SA+P  +S+
Sbjct: 512  TANGSVVETSNALDQEKVELMPRKVRHPLPNRWFSF-SLSRMSRSFSFKESSAVPQFSST 570

Query: 603  SIKAKCGPVGSLTFVDSKKFNQDNAIGGNGARSSXXXXXXXXXXXXRVHSAELVQPLKI- 427
             I    GP+ S         N+  A G N ARSS               S+ ++Q  +  
Sbjct: 571  YISINSGPLISEGSACLNNSNRKKAGGHNRARSSPLRRMLDPLLKSW--SSRILQSAETG 628

Query: 426  ----NIDPVNIKPVDITELHQSRDCETSCVQALLQLTLKNGLPLFKLVVDNSSDIFAAAV 259
                +++  N+K  D  EL Q    E S  +ALLQLT++NG+PLF+ V++N+S+I  A++
Sbjct: 629  SSNESLNFFNLKQFDAKELLQDGKHEPSRTKALLQLTIRNGVPLFRFVIENNSNILEASI 688

Query: 258  KKLPMPGEDVPSLIYALYSVHETKMKSGNWMXXXXXXXXXXXGYNIIGQIKVSAPHPPGL 79
             +L    E+     Y  Y++ E K +SG+W+            YN+IG +KV+      L
Sbjct: 689  NRLSSSQENGSGCDYTFYAIDEIKKQSGSWINRGSKEKSCGYVYNLIGHMKVNCSSIFDL 748

Query: 78   RSQNKNDQYTVRESILYGVDSGQED 4
               +   Q  V+ES+L+GVD  Q D
Sbjct: 749  TGTDSICQIKVKESVLFGVDQSQAD 773


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