BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030965
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518871.1| conserved hypothetical protein [Ricinus comm...    86   3e-15
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...    70   2e-10
gb|ABD28710.1| Polynucleotidyl transferase, Ribonuclease H fold ...    68   9e-10
ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub...    63   3e-08
ref|XP_003613921.1| hypothetical protein MTR_5g042640 [Medicago ...    62   4e-08

>ref|XP_002518871.1| conserved hypothetical protein [Ricinus communis]
           gi|223541858|gb|EEF43404.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 668

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 44/120 (36%), Positives = 62/120 (51%)
 Frame = -1

Query: 368 TAAALISKHVDLPANCTWCQQGVEDDMHVLFRCGFAREVWQNVGLQAVVLLEDNDTVLDI 189
           TA  L  ++VDL   C WC +  E   HVLF C  ARE W  +G +     E    +   
Sbjct: 454 TAMNLRMRYVDLDPLCKWCNREPETLFHVLFGCSMARECWDLLGFRFSFPTES--PICSW 511

Query: 188 LRRVFRTVHKDKCGMIGLICWGLWVRRNAWVWDKKNTSVFGVRSMAFNLLAEWKRANKVD 9
           ++  F   H+D C  + L+C  LW +RN WVW+K++ + +GV S A  LL +  RA   D
Sbjct: 512 IQNFFIDNHEDTCAKMALVCGSLWNQRNHWVWNKQSNTTYGVISPANQLLEQRTRAQSAD 571


>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
           At1g65750-like [Vitis vinifera]
          Length = 820

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 42/121 (34%), Positives = 58/121 (47%), Gaps = 1/121 (0%)
 Frame = -1

Query: 374 LPTAAALISKHVDLPANCTWCQQGVEDDMHVLFRCGFAREVWQNVGLQAVVLLEDN-DTV 198
           LPT  AL  +HVD P  C  C+  +E  +H L  C  AR+VW   GL    +L+ N  + 
Sbjct: 532 LPTRFALTIRHVDTPMCCPICRSELETTLHALVECVAARDVWDESGL---AMLQGNFGSF 588

Query: 197 LDILRRVFRTVHKDKCGMIGLICWGLWVRRNAWVWDKKNTSVFGVRSMAFNLLAEWKRAN 18
           +D L  +F             +CWGLW RRN  VW+ +      V +  F +L  W  AN
Sbjct: 589 VDWLATMFAYCDFVVFAKYLAVCWGLWWRRNDVVWNGRIWHSQQVVNGCFTMLESWFHAN 648

Query: 17  K 15
           +
Sbjct: 649 E 649


>gb|ABD28710.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 393

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 36/124 (29%), Positives = 58/124 (46%), Gaps = 2/124 (1%)
 Frame = -1

Query: 371 PTAAALISKHVDLPANCTWCQQGVEDDMHVLFRCGFAREVWQNVGLQAVVL--LEDNDTV 198
           PT   LIS+ V+ P+ C  C+   ED  H+ F C  A +VW    +  ++   L   D  
Sbjct: 81  PTRVRLISRGVNCPSACVKCEDPHEDCYHIFFHCRTAIDVWNTANVWHLIAPSLSQFDNA 140

Query: 197 LDILRRVFRTVHKDKCGMIGLICWGLWVRRNAWVWDKKNTSVFGVRSMAFNLLAEWKRAN 18
            DI+  + + +   +   I  I W +W  RN  +W + + S   +   A +LL  W++AN
Sbjct: 141 PDIIFNLLQKLSASQMESIVTIMWSIWKSRNLKLWQQVSESSVTILERAKHLLEGWRKAN 200

Query: 17  KVDG 6
              G
Sbjct: 201 HKQG 204


>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
            truncatula] gi|355513943|gb|AES95566.1| Replication
            protein A 70 kDa DNA-binding subunit [Medicago
            truncatula]
          Length = 1723

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 6/127 (4%)
 Frame = -1

Query: 374  LPTAAALISKHVDLPANCTWCQQGVEDDMHVLFRCGFAREVWQNVGL------QAVVLLE 213
            LPT   L  + V+    C  C+   ED MH+ F C  +R+ WQ +GL      +A + L 
Sbjct: 1441 LPTRVRLQDRGVNCTKTCALCENEDEDSMHLFFYCTKSRQCWQQLGLWSKVQQKAQLNLS 1500

Query: 212  DNDTVLDILRRVFRTVHKDKCGMIGLICWGLWVRRNAWVWDKKNTSVFGVRSMAFNLLAE 33
               T+ +IL+     +   +  +   + W +W +RN  +W  +  +   VR    NLL  
Sbjct: 1501 FGVTMFEILQE----LDSSQRVIWACVMWSIWKQRNDCIWRNEVMTTAAVRDRGLNLLTG 1556

Query: 32   WKRANKV 12
            W+ A  +
Sbjct: 1557 WQNAQDI 1563


>ref|XP_003613921.1| hypothetical protein MTR_5g042640 [Medicago truncatula]
           gi|355515256|gb|AES96879.1| hypothetical protein
           MTR_5g042640 [Medicago truncatula]
          Length = 270

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 36/119 (30%), Positives = 50/119 (42%), Gaps = 2/119 (1%)
 Frame = -1

Query: 380 GVLPTAAALISKHVDLPANCTWCQQGVEDDMHVLFRCGFAREVWQNVGLQAVV--LLEDN 207
           G LPT   L+ K V  P N   C    ED MHV F C FA +VW   GL   V   L   
Sbjct: 26  GCLPTHVRLLDKGVTCPTNWASCASNHEDLMHVFFDCPFAIQVWHRTGLWGSVQHALSIT 85

Query: 206 DTVLDILRRVFRTVHKDKCGMIGLICWGLWVRRNAWVWDKKNTSVFGVRSMAFNLLAEW 30
            +    +  +   +  +    +  + W +W   N  VWD    +   V   A N++A+W
Sbjct: 86  ASATKAIFFLLENLSVELTQRLSSVIWSIWKHHNLRVWDDVTETSATVVERARNMVADW 144