BLASTX nr result

ID: Bupleurum21_contig00030947 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030947
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330339.1| predicted protein [Populus trichocarpa] gi|2...   141   5e-32
ref|XP_002315562.1| predicted protein [Populus trichocarpa] gi|2...   140   1e-31
ref|XP_002280354.2| PREDICTED: uncharacterized protein LOC100254...   139   2e-31
emb|CBI39482.3| unnamed protein product [Vitis vinifera]              139   2e-31
emb|CBI26064.3| unnamed protein product [Vitis vinifera]              134   6e-30

>ref|XP_002330339.1| predicted protein [Populus trichocarpa] gi|222871543|gb|EEF08674.1|
           predicted protein [Populus trichocarpa]
          Length = 873

 Score =  141 bits (356), Expect = 5e-32
 Identities = 71/122 (58%), Positives = 90/122 (73%), Gaps = 11/122 (9%)
 Frame = -1

Query: 334 QIFSGLRQQELLSRLLPQVSEESKEVLTEVSRTFAEGDMSLIDYAFSLKKLVGLRNFIEA 155
           +IF+G RQ E+LSRLLPQ+SEE K +L + ++ F EG M L +Y F+LK +VGL   +EA
Sbjct: 251 RIFTGSRQHEMLSRLLPQLSEECKNILLQAAKAFGEGKMLLEEYVFTLKVMVGLHALVEA 310

Query: 154 VGIGKGKQDLTG-----------DDIHPEIPVGKACSSLTRAQIVNFLTGGFRLSKARSN 8
           VGIGKGKQDLTG             + PEIP+GKACS+LT  +I+N+LTGG+RLSKARSN
Sbjct: 311 VGIGKGKQDLTGITTEPLKSNQVAPVRPEIPIGKACSTLTPVEIINYLTGGYRLSKARSN 370

Query: 7   DL 2
           DL
Sbjct: 371 DL 372


>ref|XP_002315562.1| predicted protein [Populus trichocarpa] gi|222864602|gb|EEF01733.1|
           predicted protein [Populus trichocarpa]
          Length = 873

 Score =  140 bits (353), Expect = 1e-31
 Identities = 72/122 (59%), Positives = 88/122 (72%), Gaps = 11/122 (9%)
 Frame = -1

Query: 334 QIFSGLRQQELLSRLLPQVSEESKEVLTEVSRTFAEGDMSLIDYAFSLKKLVGLRNFIEA 155
           +IF+G RQ E+LSRLLPQ+SEE K +L E ++ F EG M L +Y F+LK  VGL   +EA
Sbjct: 257 RIFTGSRQHEMLSRLLPQLSEECKNILLEAAKAFGEGKMLLEEYVFTLKLTVGLHALVEA 316

Query: 154 VGIGKGKQDLTG-----------DDIHPEIPVGKACSSLTRAQIVNFLTGGFRLSKARSN 8
           VGIGKGKQDLTG             + PEIP GKACS+LT  +I+N+LTGG+RLSKARSN
Sbjct: 317 VGIGKGKQDLTGFAMESLKSNQVAHVRPEIPTGKACSTLTPVEIINYLTGGYRLSKARSN 376

Query: 7   DL 2
           DL
Sbjct: 377 DL 378


>ref|XP_002280354.2| PREDICTED: uncharacterized protein LOC100254594 [Vitis vinifera]
          Length = 954

 Score =  139 bits (350), Expect = 2e-31
 Identities = 75/122 (61%), Positives = 88/122 (72%), Gaps = 11/122 (9%)
 Frame = -1

Query: 334 QIFSGLRQQELLSRLLPQVSEESKEVLTEVSRTFAEGDMSLIDYAFSLKKLVGLRNFIEA 155
           +IF+G RQQELLSRLLPQVS+E +  L EVS++FAEG  SL +Y  SLK  VG+ N IEA
Sbjct: 344 KIFTGWRQQELLSRLLPQVSQECQNTLLEVSKSFAEGRTSLAEYVSSLKITVGICNLIEA 403

Query: 154 VGIGKGKQDLTG-----------DDIHPEIPVGKACSSLTRAQIVNFLTGGFRLSKARSN 8
           VG+GKGK  LTG             + PEIP+GKACSSLT + I+ FLTG FRLSKARSN
Sbjct: 404 VGVGKGKDGLTGIVMEPIKIHQFFSVRPEIPIGKACSSLTSSDIIKFLTGDFRLSKARSN 463

Query: 7   DL 2
           DL
Sbjct: 464 DL 465


>emb|CBI39482.3| unnamed protein product [Vitis vinifera]
          Length = 755

 Score =  139 bits (350), Expect = 2e-31
 Identities = 75/122 (61%), Positives = 88/122 (72%), Gaps = 11/122 (9%)
 Frame = -1

Query: 334 QIFSGLRQQELLSRLLPQVSEESKEVLTEVSRTFAEGDMSLIDYAFSLKKLVGLRNFIEA 155
           +IF+G RQQELLSRLLPQVS+E +  L EVS++FAEG  SL +Y  SLK  VG+ N IEA
Sbjct: 214 KIFTGWRQQELLSRLLPQVSQECQNTLLEVSKSFAEGRTSLAEYVSSLKITVGICNLIEA 273

Query: 154 VGIGKGKQDLTG-----------DDIHPEIPVGKACSSLTRAQIVNFLTGGFRLSKARSN 8
           VG+GKGK  LTG             + PEIP+GKACSSLT + I+ FLTG FRLSKARSN
Sbjct: 274 VGVGKGKDGLTGIVMEPIKIHQFFSVRPEIPIGKACSSLTSSDIIKFLTGDFRLSKARSN 333

Query: 7   DL 2
           DL
Sbjct: 334 DL 335


>emb|CBI26064.3| unnamed protein product [Vitis vinifera]
          Length = 847

 Score =  134 bits (338), Expect = 6e-30
 Identities = 71/122 (58%), Positives = 89/122 (72%), Gaps = 11/122 (9%)
 Frame = -1

Query: 334 QIFSGLRQQELLSRLLPQVSEESKEVLTEVSRTFAEGDMSLIDYAFSLKKLVGLRNFIEA 155
           +IF+GLRQQELLSRLLP +SE+ + +L EVS+TF EG + L +Y  +LK  VG+  FIEA
Sbjct: 226 RIFTGLRQQELLSRLLPHLSEQRQNILLEVSKTFGEGKILLEEYVSTLKATVGMNIFIEA 285

Query: 154 VGIGKGKQDLTG-----------DDIHPEIPVGKACSSLTRAQIVNFLTGGFRLSKARSN 8
           VGIGKG+QDLTG             + PE+P+GKACSSLT  +I+  LTG FRLSKARS+
Sbjct: 286 VGIGKGRQDLTGIALEPLKHNQVAPVRPEMPIGKACSSLTPQEIIKCLTGDFRLSKARSS 345

Query: 7   DL 2
           DL
Sbjct: 346 DL 347


Top