BLASTX nr result

ID: Bupleurum21_contig00030941 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030941
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519771.1| PREDICTED: probable pectate lyase 3-like [Gl...    76   3e-12
ref|XP_003530685.1| PREDICTED: probable pectate lyase 3-like [Gl...    74   2e-11
ref|XP_003517769.1| PREDICTED: probable pectate lyase 3-like [Gl...    74   2e-11
ref|XP_002323835.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11
ref|NP_178375.1| putative pectate lyase 6 [Arabidopsis thaliana]...    72   6e-11

>ref|XP_003519771.1| PREDICTED: probable pectate lyase 3-like [Glycine max]
          Length = 444

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 36/45 (80%), Positives = 39/45 (86%)
 Frame = +2

Query: 2   DGINIFGSSNIWIDHVSLEKCSDGLIDAIQGSTAITISNYMSADN 136
           DGI+IFGSSNIWIDHVS+ KC DGLIDAIQGSTAITISN    D+
Sbjct: 243 DGISIFGSSNIWIDHVSMRKCKDGLIDAIQGSTAITISNSHFTDH 287


>ref|XP_003530685.1| PREDICTED: probable pectate lyase 3-like [Glycine max]
          Length = 451

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 34/45 (75%), Positives = 38/45 (84%)
 Frame = +2

Query: 2   DGINIFGSSNIWIDHVSLEKCSDGLIDAIQGSTAITISNYMSADN 136
           DGI+IFGSSN+WIDHVS+  CSDGLIDAI GSTAITISN    D+
Sbjct: 249 DGISIFGSSNVWIDHVSMRNCSDGLIDAIMGSTAITISNSHFTDH 293


>ref|XP_003517769.1| PREDICTED: probable pectate lyase 3-like [Glycine max]
          Length = 464

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 33/39 (84%), Positives = 36/39 (92%)
 Frame = +2

Query: 2   DGINIFGSSNIWIDHVSLEKCSDGLIDAIQGSTAITISN 118
           DGI+IFGSSN+WIDHVS+  C DGLIDAIQGSTAITISN
Sbjct: 263 DGISIFGSSNVWIDHVSMRNCKDGLIDAIQGSTAITISN 301


>ref|XP_002323835.1| predicted protein [Populus trichocarpa] gi|222866837|gb|EEF03968.1|
           predicted protein [Populus trichocarpa]
          Length = 452

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 37/66 (56%), Positives = 46/66 (69%)
 Frame = +2

Query: 2   DGINIFGSSNIWIDHVSLEKCSDGLIDAIQGSTAITISNYMSADNLDTFTTSSVIILA*A 181
           DGI+IFGSSNIWIDHVS+ +C+DGLIDAI GSTAITISN     + D     +    +  
Sbjct: 252 DGISIFGSSNIWIDHVSMSRCTDGLIDAIMGSTAITISNSHFTHHNDAILLGASDSFSGD 311

Query: 182 EIVDVT 199
           E++ VT
Sbjct: 312 ELMQVT 317


>ref|NP_178375.1| putative pectate lyase 6 [Arabidopsis thaliana]
           gi|32129832|sp|O64510.1|PEL6_ARATH RecName:
           Full=Probable pectate lyase 6; Flags: Precursor
           gi|2947069|gb|AAC05350.1| putative pectate lyase
           [Arabidopsis thaliana] gi|28973690|gb|AAO64162.1|
           putative pectate lyase [Arabidopsis thaliana]
           gi|54606856|gb|AAV34776.1| At2g02720 [Arabidopsis
           thaliana] gi|330250521|gb|AEC05615.1| putative pectate
           lyase 6 [Arabidopsis thaliana]
          Length = 455

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 32/45 (71%), Positives = 38/45 (84%)
 Frame = +2

Query: 2   DGINIFGSSNIWIDHVSLEKCSDGLIDAIQGSTAITISNYMSADN 136
           DGINIFG++N+WIDHVS+  CSDG+IDAI GSTAITISN    D+
Sbjct: 249 DGINIFGATNVWIDHVSMTDCSDGMIDAIMGSTAITISNSHFTDH 293


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