BLASTX nr result

ID: Bupleurum21_contig00030933 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030933
         (1057 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001237594.1| uncharacterized protein LOC100306616 [Glycin...   185   2e-44
ref|XP_003537790.1| PREDICTED: uncharacterized protein LOC100792...   184   2e-44
ref|XP_002532746.1| RING finger protein, putative [Ricinus commu...   171   4e-40
ref|XP_002262663.1| PREDICTED: uncharacterized protein LOC100246...   169   8e-40
ref|XP_002321288.1| predicted protein [Populus trichocarpa] gi|2...   167   4e-39

>ref|NP_001237594.1| uncharacterized protein LOC100306616 [Glycine max]
           gi|255629089|gb|ACU14889.1| unknown [Glycine max]
          Length = 205

 Score =  185 bits (469), Expect = 2e-44
 Identities = 108/221 (48%), Positives = 139/221 (62%), Gaps = 2/221 (0%)
 Frame = +3

Query: 174 MSMREHRHPVSSTRNLRPRNRHLNVDLNARPPTENREQ-GEIVRDVQSQIGPSVEQGSSN 350
           MS R  + P  + R+ R R   L++DLN  P  ENREQ G   + V  ++   VEQ    
Sbjct: 1   MSSRAGKGP--AVRSYRRRKTALDLDLNRVPAGENREQEGPSTQSVPREV--QVEQQQQA 56

Query: 351 PPPPPIDLEALDDDVVISTPRAFAEAKSKVRRPRQRAIIVDVDLSYSEGQSSRAARNKRR 530
             PP ID+EA+DDDVV  TPRAFAEAK+  RR R+R I VDVDL        +  RNKRR
Sbjct: 57  TQPPMIDVEAIDDDVVECTPRAFAEAKNNSRRVRRRTI-VDVDLE------DQTRRNKRR 109

Query: 531 NVNP-ITIDGDSYINLEGSDNSVRNNVKRXXXXXXXXXXKELTFTCPVCLSSIVEETSTK 707
              P + I+ D YINLEG  +S+  + K+          KEL F CP+C+  +V E ST+
Sbjct: 110 RELPNLIINCDKYINLEGGSSSMEQSFKKPPEPP-----KELVFNCPICMGPMVHEMSTR 164

Query: 708 CGHIFCKNCIKSAIAAQHKCPTCRKKISMRDIIRVYLPQSN 830
           CGHIFCK+CIK+AI+AQ KCPTCRKK+  +D+IRVYLP ++
Sbjct: 165 CGHIFCKDCIKAAISAQGKCPTCRKKVVAKDLIRVYLPSTS 205


>ref|XP_003537790.1| PREDICTED: uncharacterized protein LOC100792853 [Glycine max]
          Length = 205

 Score =  184 bits (468), Expect = 2e-44
 Identities = 108/221 (48%), Positives = 141/221 (63%), Gaps = 2/221 (0%)
 Frame = +3

Query: 174 MSMREHRHPVSSTRNLRPRNRHLNVDLNARPPTENREQ-GEIVRDVQSQIGPSVEQGSSN 350
           MS R  + P  + R+ R R   L++DLN  P  ENREQ G   + V  +I   +EQ    
Sbjct: 1   MSSRAGKGP--AIRSYRRRKTALDLDLNRLPAGENREQEGPSTQAVPQEI--QLEQQPQV 56

Query: 351 PPPPPIDLEALDDDVVISTPRAFAEAKSKVRRPRQRAIIVDVDLSYSEGQSSRAARNKRR 530
             PP ID+EA+DDDVV  TPRAFAEAK+  RR R+R + VD+DL        +  RNKRR
Sbjct: 57  TQPPMIDVEAIDDDVVECTPRAFAEAKNNSRRIRRRTV-VDIDLE------DQTRRNKRR 109

Query: 531 NVNP-ITIDGDSYINLEGSDNSVRNNVKRXXXXXXXXXXKELTFTCPVCLSSIVEETSTK 707
              P + I+ D YINLEGS +S+  +VK+          KEL F CP+C+  +V E ST+
Sbjct: 110 RELPNLIINCDKYINLEGSSSSMGGSVKKTPEPP-----KELVFNCPICMGPMVHEMSTR 164

Query: 708 CGHIFCKNCIKSAIAAQHKCPTCRKKISMRDIIRVYLPQSN 830
           CGHIFCK+CIK+AI+AQ KCPTCRKK+  +D+IRVYLP ++
Sbjct: 165 CGHIFCKDCIKAAISAQGKCPTCRKKVVAKDLIRVYLPSTS 205


>ref|XP_002532746.1| RING finger protein, putative [Ricinus communis]
           gi|223527523|gb|EEF29648.1| RING finger protein,
           putative [Ricinus communis]
          Length = 224

 Score =  171 bits (432), Expect = 4e-40
 Identities = 96/215 (44%), Positives = 135/215 (62%), Gaps = 14/215 (6%)
 Frame = +3

Query: 228 RNRHLNVDLNARPPTENREQGEIVRDVQSQIGPSVEQGSSNPPPPPIDLEALDDDVVIST 407
           R R   +DLN  PP+E+R+Q         + G + +QG  + P   ID+EAL+DDVV S+
Sbjct: 17  RRRKTMLDLNV-PPSESRDQEGTSSQDAHRGGQTTQQGQQSVPLTTIDVEALEDDVVESS 75

Query: 408 PRAFAEAKSKVRR----------PRQRAIIVDVDLSYSEGQSSRA--ARNKRRNV--NPI 545
           PRAFAEAK+  +R           R   +IVDVD     G+++R   A+NKRR V  N  
Sbjct: 76  PRAFAEAKNNAQRNNLQRNHAQRTRGSTVIVDVD----SGRTTRLTYAQNKRRRVSSNQT 131

Query: 546 TIDGDSYINLEGSDNSVRNNVKRXXXXXXXXXXKELTFTCPVCLSSIVEETSTKCGHIFC 725
            I+ D Y+NLE S +S+R+N++           KE TF CP+C+   +EETSTKCGHIFC
Sbjct: 132 IINCDHYVNLESSSSSMRDNIQ----PRPPPPPKEPTFNCPICMGPFIEETSTKCGHIFC 187

Query: 726 KNCIKSAIAAQHKCPTCRKKISMRDIIRVYLPQSN 830
           K CIK+AI  Q KCPTCRK+++++++IRV+LP ++
Sbjct: 188 KACIKTAIGVQSKCPTCRKRVTIKELIRVFLPATS 222


>ref|XP_002262663.1| PREDICTED: uncharacterized protein LOC100246586 [Vitis vinifera]
          Length = 209

 Score =  169 bits (429), Expect = 8e-40
 Identities = 100/216 (46%), Positives = 133/216 (61%), Gaps = 5/216 (2%)
 Frame = +3

Query: 198 PVSSTRNLRPRNRHLNVDLNARPPTENREQGEIVRDVQSQIGPSVEQGSSNPPPPPIDLE 377
           P+   R+ R R   LN+DLN  PPT+ R+Q           GPS+   +   PP  ID+E
Sbjct: 10  PLRYARSSRRRKTVLNLDLNDTPPTDTRDQE----------GPSIR--TMPVPPAAIDVE 57

Query: 378 ALDDDVVISTPRAFAEAKSKVRRPRQRAIIVDVDLSYSEGQSSRAA--RNKRRNVNP--I 545
           A+DD+VV S+  AFA A++  RR R R + VDVDL   E Q++R    RNKRR   P   
Sbjct: 58  AIDDEVVESSATAFAAARNNSRRIRGRTV-VDVDL---EVQTTRPLNNRNKRRRAPPNQT 113

Query: 546 TIDGDSYINLEGSDNSVRNNVK-RXXXXXXXXXXKELTFTCPVCLSSIVEETSTKCGHIF 722
            I+ D YINLE S++ +R N              KE TF CP+C+  +V+E STKCGHIF
Sbjct: 114 IINDDRYINLESSNSLLRENKPPEQTWHVPPLPPKEPTFNCPICMGQLVDEMSTKCGHIF 173

Query: 723 CKNCIKSAIAAQHKCPTCRKKISMRDIIRVYLPQSN 830
           CK CIK+AI+AQ KCPTCRK+++M+D IR+YLP ++
Sbjct: 174 CKMCIKAAISAQGKCPTCRKRVTMKDTIRIYLPAAS 209


>ref|XP_002321288.1| predicted protein [Populus trichocarpa] gi|222862061|gb|EEE99603.1|
           predicted protein [Populus trichocarpa]
          Length = 213

 Score =  167 bits (423), Expect = 4e-39
 Identities = 100/210 (47%), Positives = 129/210 (61%), Gaps = 9/210 (4%)
 Frame = +3

Query: 228 RNRHLNVDLNARPPTENREQGEIVRDVQSQIGPSVEQGSSNPPPPPIDLEALDDDVVIST 407
           R R   +DLNA PPTE R         + Q   + +QG S PPP  ID++  DDDV+ S+
Sbjct: 17  RRRKTVLDLNA-PPTEGRGDEGTSSRTEPQGVQASQQGQSLPPPT-IDVDVFDDDVIESS 74

Query: 408 PRAFAEAKSKVRRPRQRAIIVDVDLSYSEGQSSRAARN---KRRNVNP--ITIDGDSYIN 572
           P AFAEAK+  RR R RA++VDV+     G++SR + N   KRR V P    I+ D YIN
Sbjct: 75  PTAFAEAKNNSRRARGRAVVVDVE----SGRTSRLSHNNLNKRRRVPPNQTIINCDLYIN 130

Query: 573 LEG----SDNSVRNNVKRXXXXXXXXXXKELTFTCPVCLSSIVEETSTKCGHIFCKNCIK 740
           LEG    S  S+R NV+           KE TF CP+CL  +VEE STKCGHIFCK CI 
Sbjct: 131 LEGGSSSSSRSMRENVQTLPP-------KEPTFNCPICLCPLVEEMSTKCGHIFCKTCIA 183

Query: 741 SAIAAQHKCPTCRKKISMRDIIRVYLPQSN 830
            AI  Q KCPTCRK+++ +++IRV+LP ++
Sbjct: 184 DAIKRQAKCPTCRKRVTNKELIRVFLPATS 213


Top