BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030932
         (391 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEJ07931.1| Opie3 pol protein [Zea mays subsp. mexicana]           159   2e-37
gb|AAN40030.1| putative gag-pol polyprotein [Zea mays]                159   2e-37
gb|ABF67934.1| Opie3 pol polyprotein [Zea mays]                       159   2e-37
gb|AAD20307.1| copia-type pol polyprotein [Zea mays]                  158   5e-37
gb|ABF67921.1| Ji1 putative pol protein [Zea mays]                    158   5e-37

>gb|AEJ07931.1| Opie3 pol protein [Zea mays subsp. mexicana]
          Length = 1048

 Score =  159 bits (403), Expect = 2e-37
 Identities = 79/129 (61%), Positives = 96/129 (74%)
 Frame = +3

Query: 3   FGPVNIMSIGRKKYALVIVDEYTRYTWVYFLAKKDETALTLMDHVRMLDKGSDHKVKIIR 182
           FGPV  +SIG  KY LVIVD+++R+TWV+FL  K ET  TL   +R      + KVK IR
Sbjct: 192 FGPVAYLSIGGSKYGLVIVDDFSRFTWVFFLQDKSETQGTLKRFLRRAQNEFELKVKKIR 251

Query: 183 SDNGTEFRNATMEDFCKDSGLKQEFSAPGTPQQNGVVERKNRTLIEAARTMLDEAKLPTY 362
           SDNG+EF+N  +E+F ++ G+K EFSAP TPQQNGVVERKNRTLI+ ARTML E K P Y
Sbjct: 252 SDNGSEFKNLQVEEFLEEEGIKHEFSAPYTPQQNGVVERKNRTLIDMARTMLGEFKTPEY 311

Query: 363 FWAEAVQTA 389
           FW+EAV TA
Sbjct: 312 FWSEAVNTA 320


>gb|AAN40030.1| putative gag-pol polyprotein [Zea mays]
          Length = 2319

 Score =  159 bits (403), Expect = 2e-37
 Identities = 79/129 (61%), Positives = 95/129 (73%)
 Frame = +3

Query: 3    FGPVNIMSIGRKKYALVIVDEYTRYTWVYFLAKKDETALTLMDHVRMLDKGSDHKVKIIR 182
            FGPV  +SIG  KY LVIVD+++R+TWV+FL+ K ET   L   +R      + K+K +R
Sbjct: 935  FGPVAYISIGGSKYGLVIVDDFSRFTWVFFLSDKGETQEILKKFMRRAQNEFELKIKKVR 994

Query: 183  SDNGTEFRNATMEDFCKDSGLKQEFSAPGTPQQNGVVERKNRTLIEAARTMLDEAKLPTY 362
            SDNGTEF+N  +E+F  + G+K EFS P TPQQNGVVERKNRTLIEAARTMLDE K P  
Sbjct: 995  SDNGTEFKNTGVEEFLGEEGIKHEFSVPYTPQQNGVVERKNRTLIEAARTMLDEYKTPDN 1054

Query: 363  FWAEAVQTA 389
            FWAEAV TA
Sbjct: 1055 FWAEAVNTA 1063


>gb|ABF67934.1| Opie3 pol polyprotein [Zea mays]
          Length = 1048

 Score =  159 bits (402), Expect = 2e-37
 Identities = 79/129 (61%), Positives = 95/129 (73%)
 Frame = +3

Query: 3   FGPVNIMSIGRKKYALVIVDEYTRYTWVYFLAKKDETALTLMDHVRMLDKGSDHKVKIIR 182
           FGPV  +SIG  KY LVIVD+++R+TWV+FL  K ET  TL   +R      + KVK IR
Sbjct: 192 FGPVAYLSIGGSKYGLVIVDDFSRFTWVFFLQDKSETQGTLKRFLRRAQNEFELKVKKIR 251

Query: 183 SDNGTEFRNATMEDFCKDSGLKQEFSAPGTPQQNGVVERKNRTLIEAARTMLDEAKLPTY 362
           SDNG+EF+N  +E+F ++ G+K EFSAP TPQQNGVVERKNRTLI+ ARTML E K P Y
Sbjct: 252 SDNGSEFKNLQVEEFLEEEGIKHEFSAPYTPQQNGVVERKNRTLIDMARTMLGEFKTPEY 311

Query: 363 FWAEAVQTA 389
           FW EAV TA
Sbjct: 312 FWTEAVNTA 320


>gb|AAD20307.1| copia-type pol polyprotein [Zea mays]
          Length = 1063

 Score =  158 bits (399), Expect = 5e-37
 Identities = 76/129 (58%), Positives = 96/129 (74%)
 Frame = +3

Query: 3   FGPVNIMSIGRKKYALVIVDEYTRYTWVYFLAKKDETALTLMDHVRMLDKGSDHKVKIIR 182
           FGP+  +SIG  KY LVIVD+Y+R+TWV+FL +K +T  TL   +R        ++K IR
Sbjct: 190 FGPIAYISIGGSKYCLVIVDDYSRFTWVFFLQEKSQTQETLKGFLRRAQNEFGLRIKKIR 249

Query: 183 SDNGTEFRNATMEDFCKDSGLKQEFSAPGTPQQNGVVERKNRTLIEAARTMLDEAKLPTY 362
           SDNGTEF+N+ +E F ++ G+K EFS+P TPQQNGVVERKNRTL++ ARTMLDE K P  
Sbjct: 250 SDNGTEFKNSQIESFLEEEGIKHEFSSPYTPQQNGVVERKNRTLLDMARTMLDEYKTPDR 309

Query: 363 FWAEAVQTA 389
           FWAEAV TA
Sbjct: 310 FWAEAVNTA 318


>gb|ABF67921.1| Ji1 putative pol protein [Zea mays]
          Length = 1063

 Score =  158 bits (399), Expect = 5e-37
 Identities = 76/129 (58%), Positives = 96/129 (74%)
 Frame = +3

Query: 3   FGPVNIMSIGRKKYALVIVDEYTRYTWVYFLAKKDETALTLMDHVRMLDKGSDHKVKIIR 182
           FGP+  +SIG  KY LVIVD+Y+R+TWV+FL +K +T  TL   +R        ++K IR
Sbjct: 190 FGPIAYISIGGSKYCLVIVDDYSRFTWVFFLQEKSQTQETLKGFLRRAQNEFGLRIKKIR 249

Query: 183 SDNGTEFRNATMEDFCKDSGLKQEFSAPGTPQQNGVVERKNRTLIEAARTMLDEAKLPTY 362
           SDNGTEF+N+ +E F ++ G+K EFS+P TPQQNGVVERKNRTL++ ARTMLDE K P  
Sbjct: 250 SDNGTEFKNSQIESFLEEEGIKHEFSSPYTPQQNGVVERKNRTLLDMARTMLDEYKTPDR 309

Query: 363 FWAEAVQTA 389
           FWAEAV TA
Sbjct: 310 FWAEAVNTA 318