BLASTX nr result

ID: Bupleurum21_contig00030917 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030917
         (735 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310889.1| predicted protein [Populus trichocarpa] gi|2...    69   8e-10
emb|CAN77738.1| hypothetical protein VITISV_020689 [Vitis vinifera]    60   5e-07

>ref|XP_002310889.1| predicted protein [Populus trichocarpa] gi|222853792|gb|EEE91339.1|
           predicted protein [Populus trichocarpa]
          Length = 193

 Score = 69.3 bits (168), Expect = 8e-10
 Identities = 45/131 (34%), Positives = 66/131 (50%), Gaps = 23/131 (17%)
 Frame = +2

Query: 335 IYQVEPSDFKQVVQRLTSIPEFQP-------RRLQDMAPPPLNLLQSTTASSDLQHCDDN 493
           +Y+V+P +F+ +VQ+LT  PE +P        RLQ +APPPL+L + T    D       
Sbjct: 63  VYKVDPINFRDLVQKLTGAPEPEPVPEPQHQPRLQSVAPPPLDLAKPTLYGRDFSAVPLQ 122

Query: 494 NINTQGH------------EAWKIHQTTFADHF----GTLTPTLSPASLAWCSFLIQSPG 625
            + +               E+  +     +D       +L   LSP+S AWCSF + SPG
Sbjct: 123 LLPSPAKTPLSALYQELMSESLDVKPKKISDSLMAVSSSLELNLSPSSRAWCSFPLLSPG 182

Query: 626 NMSTLEQGTVL 658
            +S+LEQGTVL
Sbjct: 183 TLSSLEQGTVL 193


>emb|CAN77738.1| hypothetical protein VITISV_020689 [Vitis vinifera]
          Length = 222

 Score = 60.1 bits (144), Expect = 5e-07
 Identities = 45/122 (36%), Positives = 58/122 (47%), Gaps = 14/122 (11%)
 Frame = +2

Query: 335 IYQVEPSDFKQVVQRLTSIPEFQPRRLQDMAPPPLNLLQSTTASSD--------LQHCDD 490
           +Y+V  ++F++VVQRLT  P+ + +RL+ MAPPPL L   +   SD        L  C  
Sbjct: 105 VYRVNSTNFRKVVQRLTGAPKLKSQRLKSMAPPPLPLPVXSFLQSDDNITQPILLSGCPK 164

Query: 491 ---NNINTQGHEAWKIHQTTFADH---FGTLTPTLSPASLAWCSFLIQSPGNMSTLEQGT 652
                  T GH    +    F D      T     S  S AW SF   SPG +  LEQGT
Sbjct: 165 GAATPTTTYGH----LLPGMFCDDSLMANTSLQICSSPSSAWPSFPFLSPGTLFALEQGT 220

Query: 653 VL 658
           VL
Sbjct: 221 VL 222


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