BLASTX nr result

ID: Bupleurum21_contig00030893 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030893
         (785 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278782.1| PREDICTED: uncharacterized protein LOC100259...   217   2e-54
emb|CBI26272.3| unnamed protein product [Vitis vinifera]              217   2e-54
ref|XP_002314691.1| predicted protein [Populus trichocarpa] gi|2...   208   1e-51
ref|XP_002312537.1| predicted protein [Populus trichocarpa] gi|2...   200   3e-49
ref|XP_002517119.1| conserved hypothetical protein [Ricinus comm...   190   3e-46

>ref|XP_002278782.1| PREDICTED: uncharacterized protein LOC100259691 [Vitis vinifera]
          Length = 363

 Score =  217 bits (553), Expect = 2e-54
 Identities = 116/223 (52%), Positives = 150/223 (67%), Gaps = 1/223 (0%)
 Frame = -1

Query: 746 LVLGVCLIFVLEFGFSWMVSRGLRTKFSNDFVENLGGKSWVLQDLDKKFVCLSKAIREFV 567
           LV+GV LIF  EFGFSW VSR LR + S D V ++G +SWV++DL++K   L   ++ FV
Sbjct: 141 LVVGVGLIFAAEFGFSWGVSRVLRPELSWDIVRSVGERSWVVKDLNEKVGFLQNQLQGFV 200

Query: 566 GEKNLNGSSLDDTWEINQDGLLLHSHVILYKSAAEELRIWGWPLQTAGXXXXXXXXXXXX 387
           G +  N S +D TWE++QDGLLL+S   LYKS  EE+ IWGWPLQTAG            
Sbjct: 201 GGEVSNCSYIDSTWEVSQDGLLLNSRCTLYKSVTEEVTIWGWPLQTAGLLATGLSSRSFT 260

Query: 386 XXSGRVTEWTNGKAGYVIRRANSSWTQGKWSASVVQLDRNTWILEYKRSFINENARLLSV 207
             SGRVTEW +G+   ++R+ANSSWT  KWSASVVQLD NT +LEY+RS I E++RL S 
Sbjct: 261 ILSGRVTEWPDGRIRNLLRKANSSWTHKKWSASVVQLDPNTLVLEYRRSSILESSRLFSA 320

Query: 206 ILEFLKFRINILLQKMNQEFWLLSSIHGSQSKGRA-ESFSVPT 81
            LEFL+F +  ++++M QEFW+LS      S   A ES  +PT
Sbjct: 321 ALEFLRFWMCRMVERMKQEFWVLSVFEIKYSDFTAKESDRIPT 363


>emb|CBI26272.3| unnamed protein product [Vitis vinifera]
          Length = 374

 Score =  217 bits (553), Expect = 2e-54
 Identities = 116/223 (52%), Positives = 150/223 (67%), Gaps = 1/223 (0%)
 Frame = -1

Query: 746 LVLGVCLIFVLEFGFSWMVSRGLRTKFSNDFVENLGGKSWVLQDLDKKFVCLSKAIREFV 567
           LV+GV LIF  EFGFSW VSR LR + S D V ++G +SWV++DL++K   L   ++ FV
Sbjct: 152 LVVGVGLIFAAEFGFSWGVSRVLRPELSWDIVRSVGERSWVVKDLNEKVGFLQNQLQGFV 211

Query: 566 GEKNLNGSSLDDTWEINQDGLLLHSHVILYKSAAEELRIWGWPLQTAGXXXXXXXXXXXX 387
           G +  N S +D TWE++QDGLLL+S   LYKS  EE+ IWGWPLQTAG            
Sbjct: 212 GGEVSNCSYIDSTWEVSQDGLLLNSRCTLYKSVTEEVTIWGWPLQTAGLLATGLSSRSFT 271

Query: 386 XXSGRVTEWTNGKAGYVIRRANSSWTQGKWSASVVQLDRNTWILEYKRSFINENARLLSV 207
             SGRVTEW +G+   ++R+ANSSWT  KWSASVVQLD NT +LEY+RS I E++RL S 
Sbjct: 272 ILSGRVTEWPDGRIRNLLRKANSSWTHKKWSASVVQLDPNTLVLEYRRSSILESSRLFSA 331

Query: 206 ILEFLKFRINILLQKMNQEFWLLSSIHGSQSKGRA-ESFSVPT 81
            LEFL+F +  ++++M QEFW+LS      S   A ES  +PT
Sbjct: 332 ALEFLRFWMCRMVERMKQEFWVLSVFEIKYSDFTAKESDRIPT 374


>ref|XP_002314691.1| predicted protein [Populus trichocarpa] gi|222863731|gb|EEF00862.1|
           predicted protein [Populus trichocarpa]
          Length = 359

 Score =  208 bits (529), Expect = 1e-51
 Identities = 105/205 (51%), Positives = 136/205 (66%), Gaps = 1/205 (0%)
 Frame = -1

Query: 746 LVLGVCLIFVLEFGFSWMVSRGLRTKFSNDFVENLGGKSWVLQDLDKKFVCLSKAIREFV 567
           LVLG  L+F +E GFSW V R LR  FS+D V ++G +SW +QDL+++   L   ++ FV
Sbjct: 135 LVLGSSLLFRVETGFSWGVYRVLRPVFSSDMVRSIGERSWAVQDLNRRLRFLQSELKGFV 194

Query: 566 GE-KNLNGSSLDDTWEINQDGLLLHSHVILYKSAAEELRIWGWPLQTAGXXXXXXXXXXX 390
              K  N S +D  WEINQDGLLL+S  +LYKSA EE+ IWGWPLQTAG           
Sbjct: 195 ANGKVSNCSFMDSIWEINQDGLLLNSRCVLYKSAMEEVSIWGWPLQTAGLLKTEFSSRSF 254

Query: 389 XXXSGRVTEWTNGKAGYVIRRANSSWTQGKWSASVVQLDRNTWILEYKRSFINENARLLS 210
              SGRVTEW++G+ GY IR+AN+SW    W+ASVVQLD NTWILEY+RS I  ++ L S
Sbjct: 255 TVLSGRVTEWSDGRIGYSIRKANTSWVHRNWAASVVQLDPNTWILEYERSLILNSSTLFS 314

Query: 209 VILEFLKFRINILLQKMNQEFWLLS 135
            + E  K+R++  ++ MN  FWL S
Sbjct: 315 AVAEIFKYRMSRAMKSMNPVFWLFS 339


>ref|XP_002312537.1| predicted protein [Populus trichocarpa] gi|222852357|gb|EEE89904.1|
           predicted protein [Populus trichocarpa]
          Length = 359

 Score =  200 bits (509), Expect = 3e-49
 Identities = 100/212 (47%), Positives = 136/212 (64%), Gaps = 1/212 (0%)
 Frame = -1

Query: 746 LVLGVCLIFVLEFGFSWMVSRGLRTKFSNDFVENLGGKSWVLQDLDKKFVCLSKAIREFV 567
           LV G+ L++ +E GFSW V R LR  FS+D + ++G +SWV+QD +++   L   +++FV
Sbjct: 135 LVWGLSLLYGVENGFSWGVCRVLRPAFSSDMIRSIGERSWVVQDSNRRLRFLQSELKDFV 194

Query: 566 GE-KNLNGSSLDDTWEINQDGLLLHSHVILYKSAAEELRIWGWPLQTAGXXXXXXXXXXX 390
            + K  N S ++  WEIN+DGLLL+S  +LYKSA EE+ IWGWPLQT G           
Sbjct: 195 ADGKVSNCSFMNSIWEINKDGLLLNSRCVLYKSAVEEVSIWGWPLQTGGLLKTEFSSRSF 254

Query: 389 XXXSGRVTEWTNGKAGYVIRRANSSWTQGKWSASVVQLDRNTWILEYKRSFINENARLLS 210
              SGRVTEW++GK GY IR+AN+SW    W+ASVVQLD NTWILEY+   + +N+ L S
Sbjct: 255 TVLSGRVTEWSDGKIGYSIRKANTSWVHRNWAASVVQLDPNTWILEYESRLVLDNSILFS 314

Query: 209 VILEFLKFRINILLQKMNQEFWLLSSIHGSQS 114
            +    KFR++  L+ MN  FWL S      S
Sbjct: 315 AVAGVFKFRMSRALKSMNPGFWLFSDFERQYS 346


>ref|XP_002517119.1| conserved hypothetical protein [Ricinus communis]
           gi|223543754|gb|EEF45282.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 362

 Score =  190 bits (482), Expect = 3e-46
 Identities = 104/225 (46%), Positives = 137/225 (60%), Gaps = 3/225 (1%)
 Frame = -1

Query: 746 LVLGVCLIFVLEFGFSWMVSRGLRTKF-SNDFVENLGGKSWVLQDLDKKFVCLSKAIREF 570
           LVLG+ LIFV+E GFS  VSR  +     ND V  +G +S+ ++DL  K   L   ++ F
Sbjct: 138 LVLGLSLIFVVEIGFSAGVSRASKKPLLCNDIVRKIGERSFHVKDLSGKLKFLQNELKGF 197

Query: 569 VGE-KNLNGSSLDDTWEINQDGLLLHSHVILYKSAAEELRIWGWPLQTAGXXXXXXXXXX 393
           V + K  N S +D  W+INQDGLLL+S  + YKSA EE+ IWGWPLQTAG          
Sbjct: 198 VLDVKVSNCSHMDSIWKINQDGLLLNSRCVFYKSATEEVSIWGWPLQTAGMLKTGFSSRS 257

Query: 392 XXXXSGRVTEWTNGKAGYVIRRANSSWTQGKWSASVVQLDRNTWILEYKRSFINENARLL 213
               SGRVTEW++G+ GY IR+ANSSW   KW +SVVQLD +TW+LEY RS I + +   
Sbjct: 258 FTILSGRVTEWSDGRTGYSIRKANSSWIHKKWGSSVVQLDPSTWVLEYGRSSILDYSSFS 317

Query: 212 SVILEFLKFRINILLQKMNQEFWLLSSIHGSQSKGRAES-FSVPT 81
           S + E   F I+ ++ +M QEFW  S +    S+ R E    +PT
Sbjct: 318 SAVAELFNFWISRVMTRMKQEFWFFSVLEDQYSEFRVEDHIKIPT 362


Top