BLASTX nr result
ID: Bupleurum21_contig00030887
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00030887
(1713 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002282100.2| PREDICTED: DNA repair and recombination prot... 837 0.0
emb|CAN70202.1| hypothetical protein VITISV_021223 [Vitis vinifera] 831 0.0
ref|XP_002518776.1| DNA repair and recombination protein RAD54B,... 813 0.0
ref|XP_004140701.1| PREDICTED: DNA repair and recombination prot... 789 0.0
ref|XP_003516779.1| PREDICTED: DNA repair and recombination prot... 748 0.0
>ref|XP_002282100.2| PREDICTED: DNA repair and recombination protein RAD54-like [Vitis
vinifera]
Length = 934
Score = 837 bits (2162), Expect = 0.0
Identities = 416/519 (80%), Positives = 456/519 (87%)
Frame = -1
Query: 1557 EDPSAVDTAPPKINRKAQNVDALVRGNLVVRRQSLLPRVLSVTDRAAAGRQPFQPPCSNG 1378
E+ SAV + RK+QNVDAL+RGNLV+RRQSLLPRVLSVTD AA R+PF+PP SNG
Sbjct: 36 EERSAVKSPTSDEGRKSQNVDALLRGNLVLRRQSLLPRVLSVTDGAAVARKPFKPPFSNG 95
Query: 1377 YSDHNEKLAHRLWARKRFVPWGSTSPVLIPVTNRLNIPVPVEKEVSEEDKNLPPGVEPLV 1198
Y D N++L HRLWARKRFVPWGS+ P L+ +TNR+NI EK+V EE +LP G++PLV
Sbjct: 96 YHDRNDQLVHRLWARKRFVPWGSSRPALVLITNRVNISSAAEKDVLEESVSLPAGIDPLV 155
Query: 1197 LWQPEESEGGDKDLAPIEVDPLLVKFLRPHQREGVQFMFECVSGLYSAANIHGCILADDM 1018
LW PEESE +L PI VDPLLV+FLRPHQREGVQFMF+CVSGL S ANI GCILADDM
Sbjct: 156 LWHPEESEEQADNLMPIVVDPLLVRFLRPHQREGVQFMFDCVSGLSSTANISGCILADDM 215
Query: 1017 GLGKTLQSITLLYTLLRQGFDKKPMVKKAIIVTPTSLVSNWEAEILKWVGERVRLVALCE 838
GLGKTLQSITLLYTLLRQGFD K MVKKAIIVTPTSLVSNWEAEI KWVGERV+LVALCE
Sbjct: 216 GLGKTLQSITLLYTLLRQGFDGKAMVKKAIIVTPTSLVSNWEAEIKKWVGERVQLVALCE 275
Query: 837 STRDDVVTSINNFASPRSYLQVLIVSYETFRMHSSKFSESGSCDLLICDEAHRLKNDQTL 658
STRDDVV I++F SP S LQVLIVSYETFRMHSSKFS SGSCDLLICDEAHRLKNDQTL
Sbjct: 276 STRDDVVFGIDSFTSPHSPLQVLIVSYETFRMHSSKFSHSGSCDLLICDEAHRLKNDQTL 335
Query: 657 TNRALAALPCKRRILLSGTPMQNDLEEFYAMVNFTNPGILGDASYFRRYYQTPIICGREP 478
TNRALAAL CKRR+LLSGTPMQNDLEEF+AMVNFTNPGILGDA+YFRRYY+TPIICGREP
Sbjct: 336 TNRALAALACKRRVLLSGTPMQNDLEEFFAMVNFTNPGILGDATYFRRYYETPIICGREP 395
Query: 477 SATEDEKKLGTERSAELSTKVNQFILRRTNALLSNHLPPKIVEVVCCRLTPLQIELYNHF 298
+A E+EKKLG ERSAELS+ VNQFILRRTNALLSNHLPPKIVEVVCCRL+PLQ ELYNHF
Sbjct: 396 TAAEEEKKLGAERSAELSSTVNQFILRRTNALLSNHLPPKIVEVVCCRLSPLQSELYNHF 455
Query: 297 IHSKNVKQVLNEELKQAKILACITALKKLCNHPKLIYDTIRSGSPGTSGFEDCMRFFPPE 118
IHSKNVK+V+NEE+KQ+KILA ITALKKLCNHPKLIYDT++SG+ GTSGFEDCMRFFPPE
Sbjct: 456 IHSKNVKKVINEEMKQSKILAYITALKKLCNHPKLIYDTVKSGNQGTSGFEDCMRFFPPE 515
Query: 117 LFXXXXXXXXXXXGIWVELSGKMHVLARLLAHLRQRTDD 1
+F GIWVELSGKMHVLARLLAHLRQ+TDD
Sbjct: 516 MFSGRSGAWTGGEGIWVELSGKMHVLARLLAHLRQKTDD 554
>emb|CAN70202.1| hypothetical protein VITISV_021223 [Vitis vinifera]
Length = 985
Score = 831 bits (2147), Expect = 0.0
Identities = 417/526 (79%), Positives = 455/526 (86%), Gaps = 7/526 (1%)
Frame = -1
Query: 1557 EDPSAVDTAPPKINRKAQNVDALVRGNLVVRRQSLLPRVLSVTDRAAAGRQPFQPPCSNG 1378
E+ SAV + RK+QNVDAL+RGNLVVRRQSLLPRVLSVTD AA R+PF+PP SNG
Sbjct: 36 EERSAVKSPTSDEGRKSQNVDALLRGNLVVRRQSLLPRVLSVTDGAAVARKPFKPPFSNG 95
Query: 1377 YSDHNEKLAHRLWARKRFVPWGSTSPVLIPVTNRLNIPVPVEKEVSEEDKNLPPGVEPLV 1198
Y D N++L HRLWARKRFVPWGS+ P L+ +TN +NI EK+V EE +LP G++PLV
Sbjct: 96 YHDRNDQLVHRLWARKRFVPWGSSRPALVLITNCVNISSAAEKDVLEESVSLPAGIDPLV 155
Query: 1197 LWQPEESEGGDKDLAPIEVDPLLVKFLRPHQREGVQFMFECVSGLYSAANIHGCILADDM 1018
LW PEESE +L PI VDPLLV+FLRPHQREGVQFMF+CVSGL S NI GCILADDM
Sbjct: 156 LWHPEESEEQADNLMPIVVDPLLVRFLRPHQREGVQFMFDCVSGLSSTVNISGCILADDM 215
Query: 1017 GLGKTLQSITLLYTLLRQGFDKKPMVKKAIIVTPTSLVSNWEAEILKWVGERVRLVALCE 838
GLGKTLQSITLLYTLL QGFD KPMVKKAIIVTPTSLVSNWEAEI KWVGERV+LVALCE
Sbjct: 216 GLGKTLQSITLLYTLLHQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGERVQLVALCE 275
Query: 837 STRDDVVTSINNFASPRSYLQVLIVSYETFRMHSSKFSESGSCDLLICDEAHRLKNDQTL 658
STRDDVV I++F SP S LQVLIVSYETFRMHSSKFS SGSCDLLICDEAHRLKNDQTL
Sbjct: 276 STRDDVVFGIDSFTSPHSPLQVLIVSYETFRMHSSKFSHSGSCDLLICDEAHRLKNDQTL 335
Query: 657 TNRALAALPCKRRILLSGTPMQNDLEEFYAMVNFTNPGILGDASYFRRYYQTPIICGREP 478
TNRALAAL CKRRILLSGTPMQNDLEEF+AMVNFTNPGILGDA+YFRRYY+TPIICGREP
Sbjct: 336 TNRALAALACKRRILLSGTPMQNDLEEFFAMVNFTNPGILGDATYFRRYYETPIICGREP 395
Query: 477 SATEDEKKLGTERSAELSTKVNQFILRRTNALLSNHLPPKIVEVVCCRLTPLQIELYNHF 298
+A E+EKKLG ERSAELS+ VNQFILRRTNALLSNHLPPKIVEVVCCRL+PLQ ELYNHF
Sbjct: 396 TAAEEEKKLGAERSAELSSTVNQFILRRTNALLSNHLPPKIVEVVCCRLSPLQSELYNHF 455
Query: 297 IHSKNVKQVLNEELKQAKILACITALKKLCNHPKLIYDTIRSGSPGTSGFEDCMRFFPPE 118
IHSKNVK+V+NEE+KQ+KILA ITALKKLCNHPKLIYDT++SG+PGTSGFEDCMRFFPPE
Sbjct: 456 IHSKNVKKVINEEMKQSKILAYITALKKLCNHPKLIYDTVKSGNPGTSGFEDCMRFFPPE 515
Query: 117 LF-------XXXXXXXXXXXGIWVELSGKMHVLARLLAHLRQRTDD 1
+F GIWVELSGKMHVLARLLAHLRQ+TDD
Sbjct: 516 MFSGRLLFLCVRSGAWTGGEGIWVELSGKMHVLARLLAHLRQKTDD 561
>ref|XP_002518776.1| DNA repair and recombination protein RAD54B, putative [Ricinus
communis] gi|223542157|gb|EEF43701.1| DNA repair and
recombination protein RAD54B, putative [Ricinus communis]
Length = 940
Score = 813 bits (2101), Expect = 0.0
Identities = 403/512 (78%), Positives = 450/512 (87%), Gaps = 1/512 (0%)
Frame = -1
Query: 1533 APPKINRKAQNVDALVRGNLVVRRQSLLPRVLSVTDRAAAGRQPFQPPCSNGYSDHNEKL 1354
+P K++NVDALVRGNLVV+RQSLLPRVLSVT+ AA R+PF+PP SNGY D N++L
Sbjct: 51 SPSDEELKSKNVDALVRGNLVVKRQSLLPRVLSVTEGAAICRKPFKPPSSNGYKDGNQQL 110
Query: 1353 AHRLWARKRFVPWGSTSPVLIPVTNRLNIPVPVEKEVSEEDK-NLPPGVEPLVLWQPEES 1177
+ RL ARKRFVPWGS+ PVL+P+TNR+N+ P EK+V ED LPPG++PLVLWQP+E
Sbjct: 111 SRRLLARKRFVPWGSSRPVLLPITNRINVSSPFEKDVVVEDTVTLPPGIDPLVLWQPDEC 170
Query: 1176 EGGDKDLAPIEVDPLLVKFLRPHQREGVQFMFECVSGLYSAANIHGCILADDMGLGKTLQ 997
+ + PI VD LLV+FLRPHQREGVQFMF+CVSGL+SAANI+GCILADDMGLGKTLQ
Sbjct: 171 DSTAGNFIPIIVDSLLVQFLRPHQREGVQFMFDCVSGLHSAANINGCILADDMGLGKTLQ 230
Query: 996 SITLLYTLLRQGFDKKPMVKKAIIVTPTSLVSNWEAEILKWVGERVRLVALCESTRDDVV 817
SITLLYTLL QGFD KPMV+KAIIVTPTSLVSNWEAEI KWVGE V+L+ALCE+TRDDVV
Sbjct: 231 SITLLYTLLGQGFDDKPMVRKAIIVTPTSLVSNWEAEIKKWVGESVKLIALCETTRDDVV 290
Query: 816 TSINNFASPRSYLQVLIVSYETFRMHSSKFSESGSCDLLICDEAHRLKNDQTLTNRALAA 637
+ I++FA+PRS LQVLIVSYETFRMHSSKFS SCDLLICDEAHRLKNDQTLTNRALAA
Sbjct: 291 SGIDSFANPRSNLQVLIVSYETFRMHSSKFSHDESCDLLICDEAHRLKNDQTLTNRALAA 350
Query: 636 LPCKRRILLSGTPMQNDLEEFYAMVNFTNPGILGDASYFRRYYQTPIICGREPSATEDEK 457
L CKRRILLSGTPMQNDLEEF+AMVNFTNPGILGDA+YFRRYY+TPIICGREP+ATE+EK
Sbjct: 351 LSCKRRILLSGTPMQNDLEEFFAMVNFTNPGILGDAAYFRRYYETPIICGREPTATEEEK 410
Query: 456 KLGTERSAELSTKVNQFILRRTNALLSNHLPPKIVEVVCCRLTPLQIELYNHFIHSKNVK 277
KLG ERS ELS KVNQFILRRTNALLSNHLPPKIVEVVCC+LTPLQ ELYNHFIHSKNVK
Sbjct: 411 KLGAERSGELSAKVNQFILRRTNALLSNHLPPKIVEVVCCKLTPLQSELYNHFIHSKNVK 470
Query: 276 QVLNEELKQAKILACITALKKLCNHPKLIYDTIRSGSPGTSGFEDCMRFFPPELFXXXXX 97
+ + EE K++KILA ITALKKLCNHPKLIYDTIRSG+PGTSGFEDC+RFFPP +F
Sbjct: 471 RAITEETKKSKILAYITALKKLCNHPKLIYDTIRSGTPGTSGFEDCIRFFPPGMFSGRSG 530
Query: 96 XXXXXXGIWVELSGKMHVLARLLAHLRQRTDD 1
G W+ELSGKMHVLARLLAHLRQRTDD
Sbjct: 531 TWSGGDGSWIELSGKMHVLARLLAHLRQRTDD 562
>ref|XP_004140701.1| PREDICTED: DNA repair and recombination protein RAD54-like [Cucumis
sativus] gi|449497618|ref|XP_004160452.1| PREDICTED: DNA
repair and recombination protein RAD54-like [Cucumis
sativus]
Length = 928
Score = 789 bits (2038), Expect = 0.0
Identities = 387/504 (76%), Positives = 433/504 (85%)
Frame = -1
Query: 1512 KAQNVDALVRGNLVVRRQSLLPRVLSVTDRAAAGRQPFQPPCSNGYSDHNEKLAHRLWAR 1333
K++NVDAL+RGNLVVRRQSLLPRVLSV + AA R+PF+PPCS+GY + N +LA RLWAR
Sbjct: 50 KSKNVDALLRGNLVVRRQSLLPRVLSVAEGAAVCRKPFKPPCSSGYDERNNQLARRLWAR 109
Query: 1332 KRFVPWGSTSPVLIPVTNRLNIPVPVEKEVSEEDKNLPPGVEPLVLWQPEESEGGDKDLA 1153
KRFVPWGS P + L +P E + EE LPPG++PLVLWQPE+SE +LA
Sbjct: 110 KRFVPWGSLKPASSVIATNLFLPKAAENDAVEESVTLPPGIDPLVLWQPEDSELNVTNLA 169
Query: 1152 PIEVDPLLVKFLRPHQREGVQFMFECVSGLYSAANIHGCILADDMGLGKTLQSITLLYTL 973
I VDPLLV+FLRPHQREGVQFMFECVSGL+ +I GCILADDMGLGKTLQSI+LLYTL
Sbjct: 170 SITVDPLLVRFLRPHQREGVQFMFECVSGLHKGTDIFGCILADDMGLGKTLQSISLLYTL 229
Query: 972 LRQGFDKKPMVKKAIIVTPTSLVSNWEAEILKWVGERVRLVALCESTRDDVVTSINNFAS 793
L QGFD KPMVKKAIIVTPTSLVSNWEAEI KWVGERV L+ALCES+R+DVV+SI++F
Sbjct: 230 LCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGERVHLIALCESSREDVVSSIDSFVH 289
Query: 792 PRSYLQVLIVSYETFRMHSSKFSESGSCDLLICDEAHRLKNDQTLTNRALAALPCKRRIL 613
P+S LQVLI+SYETFRMHSSKFS+S SCDLLICDEAHRLKNDQTLTNRALAAL C+RR+L
Sbjct: 290 PKSSLQVLIISYETFRMHSSKFSQSESCDLLICDEAHRLKNDQTLTNRALAALSCRRRVL 349
Query: 612 LSGTPMQNDLEEFYAMVNFTNPGILGDASYFRRYYQTPIICGREPSATEDEKKLGTERSA 433
LSGTPMQNDLEEF+AMVNFTNPGILGD S+FRRYY+ PIICGREP ATE+EKKLG +RS
Sbjct: 350 LSGTPMQNDLEEFFAMVNFTNPGILGDVSHFRRYYEAPIICGREPIATEEEKKLGAQRST 409
Query: 432 ELSTKVNQFILRRTNALLSNHLPPKIVEVVCCRLTPLQIELYNHFIHSKNVKQVLNEELK 253
ELS KVNQFILRRTNALLSNHLPPKIVEV+CC+L+PLQ +LYNHF+ SKNVK+ + EELK
Sbjct: 410 ELSEKVNQFILRRTNALLSNHLPPKIVEVICCKLSPLQADLYNHFVQSKNVKRAITEELK 469
Query: 252 QAKILACITALKKLCNHPKLIYDTIRSGSPGTSGFEDCMRFFPPELFXXXXXXXXXXXGI 73
QAKILA ITALKKLCNHPKLIYDTI+SGSPGTSG E C+RFFPPE+F G
Sbjct: 470 QAKILAYITALKKLCNHPKLIYDTIKSGSPGTSGLESCIRFFPPEMFSGRSGAWTGGDGA 529
Query: 72 WVELSGKMHVLARLLAHLRQRTDD 1
WVELSGKMHVLARLLAHLRQRTDD
Sbjct: 530 WVELSGKMHVLARLLAHLRQRTDD 553
>ref|XP_003516779.1| PREDICTED: DNA repair and recombination protein RAD54-like [Glycine
max]
Length = 894
Score = 748 bits (1932), Expect = 0.0
Identities = 379/519 (73%), Positives = 432/519 (83%), Gaps = 14/519 (2%)
Frame = -1
Query: 1515 RKAQNVDALVRGNLVVRRQSLLPRVLSVTDRAAAGRQPFQPPCSNGY---SDHNEKLAHR 1345
RK+QNVDAL+RGNLVV+RQSLLPR+LSV+ AA R+PF+PPCS + S +N+ L +
Sbjct: 27 RKSQNVDALLRGNLVVKRQSLLPRLLSVSQGAAVCRKPFKPPCSKSHASASAYNQDLTRK 86
Query: 1344 LWARKRFVPWGSTSPVLIPVT------NRLNIPVPVEKEVSEEDKNLPPGVEPLVLWQPE 1183
L ARKRFVPWGS+SP+ IP+ ++ N+ V V E +LPPG++PLVLW P+
Sbjct: 87 LSARKRFVPWGSSSPIPIPIPRSALDDSKFNVAVAVADVAEELKPSLPPGIDPLVLWHPQ 146
Query: 1182 ESEGGDKDLAPIEVDPLLVKFLRPHQREGVQFMFECVSGLYSAANIHGCILADDMGLGKT 1003
+SE + + I VDPLLV++LRPHQREGVQFMF+CVSGL + NIHGCILADDMGLGKT
Sbjct: 147 DSEDANANFTTITVDPLLVRYLRPHQREGVQFMFDCVSGLSTTPNIHGCILADDMGLGKT 206
Query: 1002 LQSITLLYTLLRQGFDKKPMVKKAIIVTPTSLVSNWEAEILKWVGERVRLVALCESTRDD 823
LQSITLLYTLL QGFD KPMV+KAIIVTPTSLVSNWEAEI KWVGERV LVALCESTR+D
Sbjct: 207 LQSITLLYTLLSQGFDGKPMVRKAIIVTPTSLVSNWEAEIKKWVGERVPLVALCESTRED 266
Query: 822 VVTSINNFASPRSYLQVLIVSYETFRMHSSKFSESGSCDLLICDEAHRLKNDQTLTNRAL 643
V++ I+NF SP+S LQVLIVSYETFRMHSSKFS + SCDLLICDEAHRLKNDQT+TNRAL
Sbjct: 267 VISGIDNFTSPKSNLQVLIVSYETFRMHSSKFSSTDSCDLLICDEAHRLKNDQTITNRAL 326
Query: 642 AALPCKRRILLSGTPMQNDLEEFYAMVNFTNPGILGDASYFRRYYQTPIICGREPSATED 463
AALPCKRRILLSGTP+QNDLEEF+AMVNFTNPGILGD ++FRRYY+ PIICGREP+AT +
Sbjct: 327 AALPCKRRILLSGTPLQNDLEEFFAMVNFTNPGILGDIAHFRRYYEAPIICGREPAATAE 386
Query: 462 EKKLGTERSAELSTKVNQFILRRTNALLSNHLPPKIVEVVCCRLTPLQ-----IELYNHF 298
EKKLG E+SAELS VN+FILRRTNALLSNHLPPKIVEVVCC+LTPLQ EL N
Sbjct: 387 EKKLGAEQSAELSVNVNRFILRRTNALLSNHLPPKIVEVVCCKLTPLQNKIIKTELINPC 446
Query: 297 IHSKNVKQVLNEELKQAKILACITALKKLCNHPKLIYDTIRSGSPGTSGFEDCMRFFPPE 118
S+ VK+ + EELKQ+KILA ITALKKLCNHPKLIYDTIRSGSPGTSGFEDC+RFFPPE
Sbjct: 447 PQSQ-VKRAITEELKQSKILAYITALKKLCNHPKLIYDTIRSGSPGTSGFEDCIRFFPPE 505
Query: 117 LFXXXXXXXXXXXGIWVELSGKMHVLARLLAHLRQRTDD 1
+ G WVELSGKMHVLARLLAHLRQRT+D
Sbjct: 506 MLSGRSGSWTGGHGAWVELSGKMHVLARLLAHLRQRTND 544