BLASTX nr result

ID: Bupleurum21_contig00030870 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030870
         (434 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABF97186.1| retrotransposon protein, putative, unclassified [...   208   3e-52
emb|CAH66492.1| H0321H01.1 [Oryza sativa Indica Group] gi|116309...   207   9e-52
ref|NP_001174783.1| Os06g0363701 [Oryza sativa Japonica Group] g...   205   4e-51
emb|CAN71189.1| hypothetical protein VITISV_005044 [Vitis vinifera]   205   4e-51
gb|ABF95221.1| retrotransposon protein, putative, unclassified [...   205   4e-51

>gb|ABF97186.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1759

 Score =  208 bits (530), Expect = 3e-52
 Identities = 95/143 (66%), Positives = 115/143 (80%)
 Frame = +1

Query: 4    FSDSDYAGHVIDRKSTSGTCQFLGGCLVSWFSKKQNSVSISTTEAEYIAAAKCCAQILWM 183
            +SDSDYAG  +DRKST+GTCQFLG  LVSW SKKQNS+++STTEAEY+AA  CCAQ+LWM
Sbjct: 1455 YSDSDYAGCKVDRKSTTGTCQFLGRSLVSWSSKKQNSIALSTTEAEYVAAGSCCAQLLWM 1514

Query: 184  KQTLADYTVKFDVVSILCDNTSAIDLSKNPVLHSRSKHIDVRHHFLRDHVNKGDIKMVHI 363
            KQTL D+   F  + +LCDN SAI ++ NPV HSR+KHID+RHHFLRDH  KGDI + H+
Sbjct: 1515 KQTLKDFGYNFTKIPLLCDNESAIKIANNPVQHSRTKHIDIRHHFLRDHETKGDIFLTHV 1574

Query: 364  DTEHNVADIFTKPLNSDRFAKLR 432
             TE  +ADIFTKPL+  RF +LR
Sbjct: 1575 RTESQLADIFTKPLDEKRFCELR 1597


>emb|CAH66492.1| H0321H01.1 [Oryza sativa Indica Group] gi|116309443|emb|CAH66516.1|
            OSIGBa0142C11.4 [Oryza sativa Indica Group]
          Length = 1566

 Score =  207 bits (526), Expect = 9e-52
 Identities = 94/143 (65%), Positives = 113/143 (79%)
 Frame = +1

Query: 4    FSDSDYAGHVIDRKSTSGTCQFLGGCLVSWFSKKQNSVSISTTEAEYIAAAKCCAQILWM 183
            +SDSDYAG  +DRKST+GTCQFLG  LVSWFSKKQNS+ +STTE EY+ A  CCAQ+LWM
Sbjct: 1407 YSDSDYAGCKVDRKSTTGTCQFLGPSLVSWFSKKQNSIVLSTTEVEYVTAGSCCAQLLWM 1466

Query: 184  KQTLADYTVKFDVVSILCDNTSAIDLSKNPVLHSRSKHIDVRHHFLRDHVNKGDIKMVHI 363
            KQTL D+   F  + +LCDN SAI ++ NPV HSR+KHID+RHHFLRDH  KGDI + H+
Sbjct: 1467 KQTLKDFGYNFTKIPLLCDNESAIKIANNPVQHSRTKHIDIRHHFLRDHETKGDICLTHV 1526

Query: 364  DTEHNVADIFTKPLNSDRFAKLR 432
             TE  +ADIFTKPL+  RF +LR
Sbjct: 1527 RTETQLADIFTKPLDEKRFCELR 1549


>ref|NP_001174783.1| Os06g0363701 [Oryza sativa Japonica Group]
            gi|255677036|dbj|BAH93511.1| Os06g0363701 [Oryza sativa
            Japonica Group]
          Length = 1355

 Score =  205 bits (521), Expect = 4e-51
 Identities = 93/143 (65%), Positives = 114/143 (79%)
 Frame = +1

Query: 4    FSDSDYAGHVIDRKSTSGTCQFLGGCLVSWFSKKQNSVSISTTEAEYIAAAKCCAQILWM 183
            +SDSDYAG  +DRKST+GTCQFLG  LVSW SKKQNS+++ST EAEY+AA  CCAQ+LWM
Sbjct: 645  YSDSDYAGCKVDRKSTTGTCQFLGWSLVSWSSKKQNSIALSTAEAEYVAADSCCAQLLWM 704

Query: 184  KQTLADYTVKFDVVSILCDNTSAIDLSKNPVLHSRSKHIDVRHHFLRDHVNKGDIKMVHI 363
            +QTL D+   F  + +LCDN SAI ++ NPV HSR+KHID+RHHFLRDH  KGDI + H+
Sbjct: 705  RQTLKDFGYNFTKIPLLCDNESAIKIANNPVQHSRTKHIDIRHHFLRDHETKGDICLTHV 764

Query: 364  DTEHNVADIFTKPLNSDRFAKLR 432
             TE  +ADIFTKPL+  RF +LR
Sbjct: 765  TTESQLADIFTKPLDEKRFCELR 787


>emb|CAN71189.1| hypothetical protein VITISV_005044 [Vitis vinifera]
          Length = 334

 Score =  205 bits (521), Expect = 4e-51
 Identities = 94/143 (65%), Positives = 118/143 (82%)
 Frame = +1

Query: 4   FSDSDYAGHVIDRKSTSGTCQFLGGCLVSWFSKKQNSVSISTTEAEYIAAAKCCAQILWM 183
           FSD+D+AG  ++RKSTSGTC FLG  LVSW SKKQNSV++ST EAEYIAA  CCAQILWM
Sbjct: 184 FSDADFAGCRVERKSTSGTCHFLGHSLVSWHSKKQNSVALSTAEAEYIAAGLCCAQILWM 243

Query: 184 KQTLADYTVKFDVVSILCDNTSAIDLSKNPVLHSRSKHIDVRHHFLRDHVNKGDIKMVHI 363
           KQTL+D+ + F+ V I CDNTSAI++SKNPV HSR+KHI++RHHFLRDH  KGDI +  +
Sbjct: 244 KQTLSDFNLSFEHVPIKCDNTSAINISKNPVQHSRTKHIEIRHHFLRDHAQKGDITLEFV 303

Query: 364 DTEHNVADIFTKPLNSDRFAKLR 432
            T+  +ADIFTKPL+ ++F+ +R
Sbjct: 304 STKDQLADIFTKPLSEEQFSDIR 326


>gb|ABF95221.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 2111

 Score =  205 bits (521), Expect = 4e-51
 Identities = 92/143 (64%), Positives = 114/143 (79%)
 Frame = +1

Query: 4    FSDSDYAGHVIDRKSTSGTCQFLGGCLVSWFSKKQNSVSISTTEAEYIAAAKCCAQILWM 183
            +SDSDYAG  +DRKST+GTCQFLG  LVSW SKKQNS+++ST EAEY+AA  CCAQ+LWM
Sbjct: 1413 YSDSDYAGCKVDRKSTTGTCQFLGRSLVSWSSKKQNSIALSTAEAEYVAAGSCCAQLLWM 1472

Query: 184  KQTLADYTVKFDVVSILCDNTSAIDLSKNPVLHSRSKHIDVRHHFLRDHVNKGDIKMVHI 363
            +QTL D+   F  + +LCDN SAI ++ NP+ HSR+KHID+RHHFLRDH  KGDI + H+
Sbjct: 1473 RQTLKDFGYNFTKIPLLCDNESAIKIANNPIQHSRTKHIDIRHHFLRDHETKGDICLTHV 1532

Query: 364  DTEHNVADIFTKPLNSDRFAKLR 432
             TE  +ADIFTKPL+  RF +LR
Sbjct: 1533 RTESQLADIFTKPLDEKRFCELR 1555


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