BLASTX nr result

ID: Bupleurum21_contig00030869 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030869
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272980.1| PREDICTED: uncharacterized protein LOC100244...    86   2e-15
ref|XP_002520725.1| conserved hypothetical protein [Ricinus comm...    79   5e-13
ref|NP_001234966.1| uncharacterized protein LOC100306689 [Glycin...    76   3e-12
ref|XP_002307589.1| predicted protein [Populus trichocarpa] gi|2...    76   3e-12
emb|CAN61445.1| hypothetical protein VITISV_024138 [Vitis vinifera]    75   6e-12

>ref|XP_002272980.1| PREDICTED: uncharacterized protein LOC100244184 [Vitis vinifera]
           gi|296085207|emb|CBI28702.3| unnamed protein product
           [Vitis vinifera]
          Length = 169

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 48/93 (51%), Positives = 56/93 (60%), Gaps = 6/93 (6%)
 Frame = +1

Query: 64  PLSITCSLQSHHHFLETH------STKTSLYTLKHPNSRNDANVSRAPRSSNSKDKSSDF 225
           PLS  C L  H    +TH      S K S  T K P SR +   + A  ++ +  K S F
Sbjct: 8   PLSFPCLLPPHQSPSQTHFSNSIFSPKISSTTRKPPISRRE---TVAIAANPNDPKESVF 64

Query: 226 LDNNGEIDDMDGYLNNLSLEYDSVWDTKPSWCQ 324
           +D NG +DDMDGYLN LSLEYDSVWDTKPSWCQ
Sbjct: 65  MDENGAVDDMDGYLNYLSLEYDSVWDTKPSWCQ 97


>ref|XP_002520725.1| conserved hypothetical protein [Ricinus communis]
           gi|223540110|gb|EEF41687.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 173

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 46/92 (50%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
 Frame = +1

Query: 55  FLSPLSITCSLQSHHHFLETHS-TKTSLYTLKHPNSRNDANVSRAPRSSNSKDKS-SDFL 228
           F SP+ +     S  H  +  S    S YTL     R    V       NS D + S FL
Sbjct: 14  FSSPVRLKNDSSSRTHLRKRSSWPNISSYTLNSAKIRGKTVVF----GGNSSDPNESQFL 69

Query: 229 DNNGEIDDMDGYLNNLSLEYDSVWDTKPSWCQ 324
           D NG +DDMDGYLN LSLEYDSVWDTKPSWCQ
Sbjct: 70  DENGVVDDMDGYLNYLSLEYDSVWDTKPSWCQ 101


>ref|NP_001234966.1| uncharacterized protein LOC100306689 [Glycine max]
           gi|255629283|gb|ACU14986.1| unknown [Glycine max]
          Length = 166

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 40/96 (41%), Positives = 56/96 (58%)
 Frame = +1

Query: 37  VKMITLFLSPLSITCSLQSHHHFLETHSTKTSLYTLKHPNSRNDANVSRAPRSSNSKDKS 216
           ++ + + + PL  +  L + +H   +H    S  ++    S N   V     S + KD S
Sbjct: 1   MRAVLVSVLPLPPSHRLSTQNHNPNSHLRFPSSSSVTSSTSSNRIIVFGVNPSDSKKDPS 60

Query: 217 SDFLDNNGEIDDMDGYLNNLSLEYDSVWDTKPSWCQ 324
             F D NG ++DM+GYLN+LSLEYDSVWDTKPSWCQ
Sbjct: 61  --FFDENGAVNDMEGYLNHLSLEYDSVWDTKPSWCQ 94


>ref|XP_002307589.1| predicted protein [Populus trichocarpa] gi|222857038|gb|EEE94585.1|
           predicted protein [Populus trichocarpa]
          Length = 174

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 52/107 (48%), Positives = 59/107 (55%), Gaps = 13/107 (12%)
 Frame = +1

Query: 43  MITLFLSPLSITCS----LQSHHHFLE-THSTKT------SLYTLKHPNSRNDANVSRAP 189
           M TLF  PLS+ C     L+S+ +    TH +K       SL T +    R    V    
Sbjct: 1   MGTLFF-PLSLCCPPSLRLRSNQYSSSRTHLSKPISYPHISLITSRSNRFRGKTVVF--- 56

Query: 190 RSSNSKD--KSSDFLDNNGEIDDMDGYLNNLSLEYDSVWDTKPSWCQ 324
              NS D    S FLD NG +DDMDGYLN LSLEYDSVWDTKPSWCQ
Sbjct: 57  -GGNSSDIPNESQFLDENGAVDDMDGYLNYLSLEYDSVWDTKPSWCQ 102


>emb|CAN61445.1| hypothetical protein VITISV_024138 [Vitis vinifera]
          Length = 416

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 33/45 (73%), Positives = 38/45 (84%), Gaps = 1/45 (2%)
 Frame = +1

Query: 193 SSNSKD-KSSDFLDNNGEIDDMDGYLNNLSLEYDSVWDTKPSWCQ 324
           ++N  D K S F+D NG +DDMDGYLN+LSLEYDSVWDTKPSWCQ
Sbjct: 300 AANPNDPKESVFMDENGAVDDMDGYLNHLSLEYDSVWDTKPSWCQ 344


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