BLASTX nr result

ID: Bupleurum21_contig00030856 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030856
         (641 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABI34274.1| IS10 transposase, putative [Solanum lycopersicum]       93   4e-17
emb|CBI15061.3| unnamed protein product [Vitis vinifera]               92   1e-16
ref|XP_002283257.1| PREDICTED: uncharacterized protein LOC100246...    92   1e-16
ref|XP_002318641.1| predicted protein [Populus trichocarpa] gi|2...    91   2e-16
ref|XP_002322157.1| predicted protein [Populus trichocarpa] gi|1...    91   2e-16

>gb|ABI34274.1| IS10 transposase, putative [Solanum lycopersicum]
          Length = 648

 Score = 93.2 bits (230), Expect = 4e-17
 Identities = 49/75 (65%), Positives = 62/75 (82%)
 Frame = +3

Query: 3   SEIVAGPRWKTFIRRFNRTNKTGLVNSKSSKFQYDPLSYALNFDEGLGQNGDSEQVEDYL 182
           SEIVAGPRWKTFIRRF+R NK+G   ++++KFQYDPLSY+LNFDEG G NG+ E  E+ +
Sbjct: 78  SEIVAGPRWKTFIRRFHR-NKSG---NRNAKFQYDPLSYSLNFDEGRGNNGEEE--EELV 131

Query: 183 YRNFSSRYATAAVPA 227
            RNFS+RY  A++PA
Sbjct: 132 LRNFSTRY--ASIPA 144


>emb|CBI15061.3| unnamed protein product [Vitis vinifera]
          Length = 156

 Score = 91.7 bits (226), Expect = 1e-16
 Identities = 44/81 (54%), Positives = 58/81 (71%)
 Frame = +3

Query: 3   SEIVAGPRWKTFIRRFNRTNKTGLVNSKSSKFQYDPLSYALNFDEGLGQNGDSEQVEDYL 182
           SE+ AGPRWKTFIRRFN+T   G   ++  KFQYDPLSY+LNFDEG G NG S+    Y 
Sbjct: 75  SELAAGPRWKTFIRRFNKTRSGG---ARHGKFQYDPLSYSLNFDEGAGHNGSSDDDRGY- 130

Query: 183 YRNFSSRYATAAVPAKAPVED 245
              F++RYA+ ++ +K+ +ED
Sbjct: 131 --EFTARYASVSLSSKSSMED 149


>ref|XP_002283257.1| PREDICTED: uncharacterized protein LOC100246674 [Vitis vinifera]
          Length = 163

 Score = 91.7 bits (226), Expect = 1e-16
 Identities = 44/81 (54%), Positives = 58/81 (71%)
 Frame = +3

Query: 3   SEIVAGPRWKTFIRRFNRTNKTGLVNSKSSKFQYDPLSYALNFDEGLGQNGDSEQVEDYL 182
           SE+ AGPRWKTFIRRFN+T   G   ++  KFQYDPLSY+LNFDEG G NG S+    Y 
Sbjct: 82  SELAAGPRWKTFIRRFNKTRSGG---ARHGKFQYDPLSYSLNFDEGAGHNGSSDDDRGY- 137

Query: 183 YRNFSSRYATAAVPAKAPVED 245
              F++RYA+ ++ +K+ +ED
Sbjct: 138 --EFTARYASVSLSSKSSMED 156


>ref|XP_002318641.1| predicted protein [Populus trichocarpa] gi|222859314|gb|EEE96861.1|
           predicted protein [Populus trichocarpa]
          Length = 172

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 46/84 (54%), Positives = 60/84 (71%), Gaps = 3/84 (3%)
 Frame = +3

Query: 3   SEIVAGPRWKTFIRRFNRTNKTGLVNSK-SSKFQYDPLSYALNFDEGL-GQNGDSEQVED 176
           SE+VAGP+WKTFIRRFNR   +G  N +   KFQYDP SY+LNFDEG  GQNG+ + ++D
Sbjct: 78  SEVVAGPKWKTFIRRFNRNKNSGSGNGRHHGKFQYDPFSYSLNFDEGPGGQNGNLDDLDD 137

Query: 177 YL-YRNFSSRYATAAVPAKAPVED 245
           Y  +R+FSSRYA+ +   +    D
Sbjct: 138 YNGFRDFSSRYASVSASGRPVAVD 161


>ref|XP_002322157.1| predicted protein [Populus trichocarpa] gi|118486982|gb|ABK95323.1|
           unknown [Populus trichocarpa]
           gi|222869153|gb|EEF06284.1| predicted protein [Populus
           trichocarpa]
          Length = 172

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 47/84 (55%), Positives = 61/84 (72%), Gaps = 3/84 (3%)
 Frame = +3

Query: 3   SEIVAGPRWKTFIRRFNRTNKTGLVNS-KSSKFQYDPLSYALNFDEGL-GQNGDSEQVED 176
           SEIVAGP+WKTFIRRFNRT  +G  +  +   FQYDPLSY+LNFDEG  GQ GD ++++D
Sbjct: 78  SEIVAGPKWKTFIRRFNRTKSSGSGSGRRHGNFQYDPLSYSLNFDEGPGGQKGDFDELDD 137

Query: 177 Y-LYRNFSSRYATAAVPAKAPVED 245
           Y  +R+FSSRYA+ +   +    D
Sbjct: 138 YGGFRDFSSRYASVSASGQPVAMD 161


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