BLASTX nr result

ID: Bupleurum21_contig00030843 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030843
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23965.3| unnamed protein product [Vitis vinifera]               85   5e-15
emb|CAN80297.1| hypothetical protein VITISV_026244 [Vitis vinifera]    82   3e-14
ref|XP_002519065.1| conserved hypothetical protein [Ricinus comm...    71   8e-11
ref|XP_002269383.2| PREDICTED: uncharacterized protein LOC100253...    65   6e-09
ref|XP_002329586.1| predicted protein [Populus trichocarpa] gi|2...    63   2e-08

>emb|CBI23965.3| unnamed protein product [Vitis vinifera]
          Length = 604

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 47/126 (37%), Positives = 69/126 (54%), Gaps = 3/126 (2%)
 Frame = +3

Query: 72  VNGTLRNLGSVGDKGYFKSIDVLGVSMRGYNFTLIESEKEHKVFSVYDKLGNSSLGFEMG 251
           V GTL ++ +     YFK + +LG+S   Y +T IE E      S Y    ++SL  ++ 
Sbjct: 48  VRGTLESVDTEDSFNYFKPVSILGISQMRYEYTSIEKEIGSGFLSEYSSDEDASLSLDVS 107

Query: 252 QE--VCSVVKYDSRVELSYLDDCGAVNCQVVGVDSD-VVPAFMVFDEVQCLENGRVRYLL 422
           +   +CS V+     EL Y  DC  VNC  +G  +    P FM FD+V+C ++G+V  LL
Sbjct: 108 ERPGLCSFVRSAGGFELEYESDCDTVNCSPLGGGTPGFSPKFMSFDQVECQDDGKVHMLL 167

Query: 423 RFTNSS 440
           RF+NSS
Sbjct: 168 RFSNSS 173


>emb|CAN80297.1| hypothetical protein VITISV_026244 [Vitis vinifera]
          Length = 367

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 47/133 (35%), Positives = 72/133 (54%), Gaps = 3/133 (2%)
 Frame = +3

Query: 51  SNISHSFVNGTLRNLGSVGDKGYFKSIDVLGVSMRGYNFTLIESEKEHKVFSVYDKLGNS 230
           S+I +S V  TL ++ +     YFK + +LG+S   Y +TLIE E      + Y    ++
Sbjct: 84  SSIVYSLVRSTLESVDTEDSFTYFKPVSILGISQMRYEYTLIEKEIGSGFLNEYSSDKDA 143

Query: 231 SLGFEMGQE--VCSVVKYDSRVELSYLDDCGAVNCQVVGVDSD-VVPAFMVFDEVQCLEN 401
           SL  ++G+   +CS  +      L Y  DC  VNC  +G  +    P FM FD+V+C ++
Sbjct: 144 SLSLDVGERLGLCSFGRLVGGFHLEYESDCDIVNCSPLGGGTPRFSPKFMSFDQVECQDD 203

Query: 402 GRVRYLLRFTNSS 440
           G+V  LL F+NSS
Sbjct: 204 GKVHMLLWFSNSS 216


>ref|XP_002519065.1| conserved hypothetical protein [Ricinus communis]
           gi|223541728|gb|EEF43276.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 964

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 48/152 (31%), Positives = 78/152 (51%), Gaps = 9/152 (5%)
 Frame = +3

Query: 18  NVVLILDYMNVSNISHSFVNGTLRNLGSVGDKGYFKSIDVLGVSMRG-YNFTLIESEKEH 194
           NVVL L Y  V +   S ++G L ++      GYF+ I +LG+   G YN+TLI    ++
Sbjct: 212 NVVLKLKYPVVFSNVSSLISGVLESVNDKSSLGYFEPISILGIPHFGEYNYTLINKGNDN 271

Query: 195 KVFSVYDKLGNSSLGFE-MGQEVC--SVVKYDSRVELSYLDDC---GAVNCQVVGVDSDV 356
             F   D+ GN +L  E +    C   + ++   ++L Y  DC   G+  C   G DS +
Sbjct: 272 VCFEGNDR-GNDNLHLEWLDPSTCLTHLYRFARNLKLEYGKDCHRNGSGRCNPFGGDSGI 330

Query: 357 VPAFMVFDEVQCLE--NGRVRYLLRFTNSSWF 446
           +P FM    ++C    NG ++ L+ F+NS ++
Sbjct: 331 LPKFMTIQGIRCERGGNGGIQLLIGFSNSVYY 362


>ref|XP_002269383.2| PREDICTED: uncharacterized protein LOC100253928 [Vitis vinifera]
          Length = 708

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 37/97 (38%), Positives = 53/97 (54%), Gaps = 3/97 (3%)
 Frame = +3

Query: 159 YNFTLIESEKEHKVFSVYDKLGNSSLGFEMGQE--VCSVVKYDSRVELSYLDDCGAVNCQ 332
           Y +T IE E      S Y    ++SL  ++ +   +CS V+     EL Y  DC  VNC 
Sbjct: 3   YEYTSIEKEIGSGFLSEYSSDEDASLSLDVSERPGLCSFVRSAGGFELEYESDCDTVNCS 62

Query: 333 VVGVDSD-VVPAFMVFDEVQCLENGRVRYLLRFTNSS 440
            +G  +    P FM FD+V+C ++G+V  LLRF+NSS
Sbjct: 63  PLGGGTPGFSPKFMSFDQVECQDDGKVHMLLRFSNSS 99


>ref|XP_002329586.1| predicted protein [Populus trichocarpa] gi|222870295|gb|EEF07426.1|
           predicted protein [Populus trichocarpa]
          Length = 935

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 42/143 (29%), Positives = 67/143 (46%), Gaps = 3/143 (2%)
 Frame = +3

Query: 24  VLILDYMNVSNISHSFVNGTLRNLGSVGDKGYFKSIDVLGVSMRGYNFTLIESEKEHKVF 203
           +L LD +  S+   S V G L +  + GD GYFK I +L      Y FT +    +H   
Sbjct: 202 LLKLDEVRKSSTISSLVRGILESSSTAGDSGYFKPISLLMFPQNNYEFTEVGKALDHVCT 261

Query: 204 SVYDKLGNSSLGFEMGQEVCSVV-KYDSRVELSYLDDCGAV-NCQVVGVDSDVVPAFMVF 377
                  N SL  ++   +C+   ++ +  +L Y   C +  +C   G     +P  M  
Sbjct: 262 GGIVVPKNLSLSLKLSTRICNAFSRWHTFFKLEYSSGCKSTSSCNPFGEGVGHLPQIMSL 321

Query: 378 DEVQCLEN-GRVRYLLRFTNSSW 443
             +QCLE+  R+R+L+ F NSS+
Sbjct: 322 KLIQCLEDKRRLRFLIEFHNSSY 344


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