BLASTX nr result

ID: Bupleurum21_contig00030835 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030835
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306703.1| SET domain protein [Populus trichocarpa] gi|...    81   1e-13
ref|XP_002265243.2| PREDICTED: protein SET DOMAIN GROUP 41-like ...    80   2e-13
emb|CBI18219.3| unnamed protein product [Vitis vinifera]               80   2e-13
ref|XP_003548980.1| PREDICTED: protein SET DOMAIN GROUP 41-like ...    77   2e-12
ref|XP_003595407.1| Protein SET DOMAIN GROUP [Medicago truncatul...    73   3e-11

>ref|XP_002306703.1| SET domain protein [Populus trichocarpa]
           gi|222856152|gb|EEE93699.1| SET domain protein [Populus
           trichocarpa]
          Length = 626

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 47/122 (38%), Positives = 62/122 (50%), Gaps = 10/122 (8%)
 Frame = -2

Query: 396 SVGSSHTQTFEFEQISRTFCKCITDLTQQVWIFLIQGDHYLRGVINPIDFTWLRNTKDFK 217
           S G  H +   F+ +S  F  CI  L Q+VW FLIQGD YL+   +P DF+WL  + D  
Sbjct: 492 SFGQDHIRKAGFDSVSSRFLDCIGSLLQEVWGFLIQGDRYLKMFKDPTDFSWLGKSLD-- 549

Query: 216 VLDYKATFGCDDVERSYLKCIKEEN----------DNQRIYIFQLGAHCLLYGELILKIC 67
           + D+ A    +DV+     C   ++          D  RI  FQLG HCLLYG  +  IC
Sbjct: 550 IWDFDAELTHNDVD---FNCWTNKSVSGIEALGYTDQWRINTFQLGVHCLLYGGFLAGIC 606

Query: 66  CG 61
            G
Sbjct: 607 YG 608


>ref|XP_002265243.2| PREDICTED: protein SET DOMAIN GROUP 41-like [Vitis vinifera]
          Length = 660

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 42/122 (34%), Positives = 63/122 (51%), Gaps = 7/122 (5%)
 Frame = -2

Query: 405 FEASVGSSHTQTFEFEQISRTFCKCITDLTQQVWIFLIQGDHYLRGVINPIDFTWLRNTK 226
           FEA+   S       E IS+ F  C++ +T +VW FLIQG H  +   +PID  WL+  +
Sbjct: 511 FEANFFGSQAHNGGLENISKQFLNCVSSITPKVWSFLIQGHHLCKKFKDPIDSNWLQKME 570

Query: 225 DFKVLDYKATFGCD-------DVERSYLKCIKEENDNQRIYIFQLGAHCLLYGELILKIC 67
             K+  ++A  GC        D E +     + + + +R  +F+LG HCLLYG  +  IC
Sbjct: 571 TSKIWGFQAHSGCTAMDSSSWDEESTGGYEAQRDTNQERKNLFKLGIHCLLYGGFLSSIC 630

Query: 66  CG 61
            G
Sbjct: 631 YG 632


>emb|CBI18219.3| unnamed protein product [Vitis vinifera]
          Length = 533

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 42/122 (34%), Positives = 63/122 (51%), Gaps = 7/122 (5%)
 Frame = -2

Query: 405 FEASVGSSHTQTFEFEQISRTFCKCITDLTQQVWIFLIQGDHYLRGVINPIDFTWLRNTK 226
           FEA+   S       E IS+ F  C++ +T +VW FLIQG H  +   +PID  WL+  +
Sbjct: 374 FEANFFGSQAHNGGLENISKQFLNCVSSITPKVWSFLIQGHHLCKKFKDPIDSNWLQKME 433

Query: 225 DFKVLDYKATFGCD-------DVERSYLKCIKEENDNQRIYIFQLGAHCLLYGELILKIC 67
             K+  ++A  GC        D E +     + + + +R  +F+LG HCLLYG  +  IC
Sbjct: 434 TSKIWGFQAHSGCTAMDSSSWDEESTGGYEAQRDTNQERKNLFKLGIHCLLYGGFLSSIC 493

Query: 66  CG 61
            G
Sbjct: 494 YG 495


>ref|XP_003548980.1| PREDICTED: protein SET DOMAIN GROUP 41-like [Glycine max]
          Length = 629

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 42/129 (32%), Positives = 65/129 (50%), Gaps = 7/129 (5%)
 Frame = -2

Query: 405 FEASVGSSHTQTFEFEQISRTFCKCITDLTQQVWIFLIQGDHYLRGVINPIDFTWLRNTK 226
           F A + +   ++ +FE +S  F  C++D+TQ+VW FLI    +L+   +PI  +WL +TK
Sbjct: 484 FRAGMLNGQIKSADFENVSNEFLHCVSDITQKVWGFLISDCQFLQSCKDPIISSWLMSTK 543

Query: 225 DFKVLDYKATFG------CDDVERSYLKCIKEE-NDNQRIYIFQLGAHCLLYGELILKIC 67
               +D +           ++ E S   C ++   D+    IFQLG HCL YG L+  IC
Sbjct: 544 SSSTVDVEVCVNKTNMCYTNESENSVSMCHEQTLADHAVACIFQLGVHCLAYGGLLASIC 603

Query: 66  CGKDPQSAC 40
            G      C
Sbjct: 604 YGPHSHLVC 612


>ref|XP_003595407.1| Protein SET DOMAIN GROUP [Medicago truncatula]
           gi|355484455|gb|AES65658.1| Protein SET DOMAIN GROUP
           [Medicago truncatula]
          Length = 683

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 39/120 (32%), Positives = 65/120 (54%), Gaps = 5/120 (4%)
 Frame = -2

Query: 405 FEASVGSSHTQTFEFEQISRTFCKCITDLTQQVWIFLIQGDHYLRGVINPIDFTWL---R 235
           F A + +    + +FE +S  F   ++D+T+ VW FL+ G  +L+   +PI+F W+   +
Sbjct: 542 FRACMLNGQINSQDFENVSNEFIHSVSDITRNVWSFLVYGCQFLKSCKDPINFGWVMSKQ 601

Query: 234 NTKDFKVLDYKA--TFGCDDVERSYLKCIKEENDNQRIYIFQLGAHCLLYGELILKICCG 61
           N+ D +  D K    +  + V     +  ++ ND+   +IFQLG HCL YG L+  IC G
Sbjct: 602 NSLDVRAHDIKTGMCYTHEPVNSIGFRGEQDYNDHTVTHIFQLGVHCLTYGGLLACICYG 661


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