BLASTX nr result

ID: Bupleurum21_contig00030831 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030831
         (734 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34417.3| unnamed protein product [Vitis vinifera]               95   2e-17
ref|XP_002276602.1| PREDICTED: uncharacterized protein LOC100255...    94   4e-17
ref|XP_003634111.1| PREDICTED: uncharacterized protein LOC100241...    85   2e-14
emb|CBI22577.3| unnamed protein product [Vitis vinifera]               85   2e-14
ref|XP_002509888.1| transcription factor, putative [Ricinus comm...    81   2e-13

>emb|CBI34417.3| unnamed protein product [Vitis vinifera]
          Length = 505

 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 65/206 (31%), Positives = 97/206 (47%), Gaps = 19/206 (9%)
 Frame = -2

Query: 562 DLDGSSLVLGGYSARKNEESSVDIGLSINLSFNGNRRVEKRNKYSDKASTLVLERSEPHL 383
           DL  S  V   ++    EESS+D+ L   L   GN +     KY+  +   +  +++  L
Sbjct: 52  DLTASKGVKRKWTKENEEESSMDLELDFTLHL-GNEKTPSTKKYAGSSLKALELQTDIDL 110

Query: 382 ELNLSTYPSESNITTITQASIRFQESATQPVG--------EGTISSRWKLWXXXXXX*NM 227
           EL+LST P+ES+IT+I  AS     +   P+G        EG+ SS WK         + 
Sbjct: 111 ELSLSTGPAESDITSI-HASSTLLHAMDMPLGVARAAHLDEGSTSSPWKPGTSLSSSLHA 169

Query: 226 EMTTISSLVPSNYITGPTATAPL-----------NNSLACVSDVANQQQCPKSRAKQCQF 80
            +   +SL           T+P+            +S+ C S +  QQ    + +K CQF
Sbjct: 170 PLIKKTSLFSHQIPQRMDPTSPVPDLSSSIITTPKSSVTCTSGITQQQPQRSTSSKTCQF 229

Query: 79  SGCTKGSRSPTKFCIGHGGGKRCQKS 2
            GC KG+R  +  CI HGGG+RCQK+
Sbjct: 230 KGCGKGARGASGLCIAHGGGRRCQKT 255


>ref|XP_002276602.1| PREDICTED: uncharacterized protein LOC100255255 [Vitis vinifera]
          Length = 684

 Score = 93.6 bits (231), Expect = 4e-17
 Identities = 82/263 (31%), Positives = 121/263 (46%), Gaps = 24/263 (9%)
 Frame = -2

Query: 718 MDLTSEYVPNLFAPN-VSKHLNVIDAGDRFPSV-DPCQYDVGRKKKLKITNVPSDLDGSS 545
           +D  S  +P+L A   V +  ++ID G R   V       +GR          SD  GSS
Sbjct: 43  LDSPSSSIPDLTASKGVKRKWSLID-GTRGQQVGSSLSLGLGRSSS------SSDSKGSS 95

Query: 544 LVLGGY--SARKNEE-SSVDIGLSINLSFNGNRRVEKRNKYSDKASTLVLERSEPHLELN 374
                   SA++NEE SS+D+ L   L   GN +     KY+  +   +  +++  LEL+
Sbjct: 96  ATACTTMSSAKENEEESSMDLELDFTLHL-GNEKTPSTKKYAGSSLKALELQTDIDLELS 154

Query: 373 LSTYPSESNITTITQASIRFQESATQPVG--------EGTISSRWKLWXXXXXX*NMEMT 218
           LST P+ES+IT+I  AS     +   P+G        EG+ SS WK         +  + 
Sbjct: 155 LSTGPAESDITSI-HASSTLLHAMDMPLGVARAAHLDEGSTSSPWKPGTSLSSSLHAPLI 213

Query: 217 TISSLVPSNYITGPTATAPL-----------NNSLACVSDVANQQQCPKSRAKQCQFSGC 71
             +SL           T+P+            +S+ C S +  QQ    + +K CQF GC
Sbjct: 214 KKTSLFSHQIPQRMDPTSPVPDLSSSIITTPKSSVTCTSGITQQQPQRSTSSKTCQFKGC 273

Query: 70  TKGSRSPTKFCIGHGGGKRCQKS 2
            KG+R  +  CI HGGG+RCQK+
Sbjct: 274 GKGARGASGLCIAHGGGRRCQKT 296


>ref|XP_003634111.1| PREDICTED: uncharacterized protein LOC100241527 [Vitis vinifera]
          Length = 702

 Score = 84.7 bits (208), Expect = 2e-14
 Identities = 67/239 (28%), Positives = 103/239 (43%), Gaps = 40/239 (16%)
 Frame = -2

Query: 601 GRKKKLKITNVPSDL-DGSSLVLG-GYSARKNEESS--------------------VDIG 488
           G K+K    + P  L DGSSLV G G+S+  ++                       +D+ 
Sbjct: 53  GAKRKFDTIDGPRRLQDGSSLVFGLGHSSSSSDSKGSSATACTTISSMKETEDDFLMDLN 112

Query: 487 LSINLSFNGNRRVEKRNKYSDKASTLVLERSEPHLELNLSTYPSESNITTITQASIRFQE 308
           L  NL     R +  +  +      L +E+ +  L L+LS+  +ES+IT++T  S  FQ 
Sbjct: 113 LDFNLHIGKERTLNPKKNFHSTPKGLEVEKPKLDLVLSLSSGYAESDITSVTPDSGPFQS 172

Query: 307 SATQPV--------GEGTISSRWKLWXXXXXX*NMEMT-TISSLVPSNYITGPTATAPL- 158
           +   PV         EG+ S RWK          ++ T T +  +P    T PT  A   
Sbjct: 173 NVEMPVTPSTVELVDEGSTSLRWKRRHFLPPLHPLQNTDTAAGFIPCAVHTDPTPVALSL 232

Query: 157 --------NNSLACVSDVANQQQCPKSRAKQCQFSGCTKGSRSPTKFCIGHGGGKRCQK 5
                    +S++   +  N QQ   +  K CQ  GC +G+R  +  CI HGGG+RC +
Sbjct: 233 PPTVIVMPESSVSSALETTNGQQQRSTSVKTCQVEGCWRGARGASGRCIAHGGGRRCHR 291


>emb|CBI22577.3| unnamed protein product [Vitis vinifera]
          Length = 564

 Score = 84.7 bits (208), Expect = 2e-14
 Identities = 67/239 (28%), Positives = 103/239 (43%), Gaps = 40/239 (16%)
 Frame = -2

Query: 601 GRKKKLKITNVPSDL-DGSSLVLG-GYSARKNEESS--------------------VDIG 488
           G K+K    + P  L DGSSLV G G+S+  ++                       +D+ 
Sbjct: 96  GAKRKFDTIDGPRRLQDGSSLVFGLGHSSSSSDSKGSSATACTTISSMKETEDDFLMDLN 155

Query: 487 LSINLSFNGNRRVEKRNKYSDKASTLVLERSEPHLELNLSTYPSESNITTITQASIRFQE 308
           L  NL     R +  +  +      L +E+ +  L L+LS+  +ES+IT++T  S  FQ 
Sbjct: 156 LDFNLHIGKERTLNPKKNFHSTPKGLEVEKPKLDLVLSLSSGYAESDITSVTPDSGPFQS 215

Query: 307 SATQPV--------GEGTISSRWKLWXXXXXX*NMEMT-TISSLVPSNYITGPTATAPL- 158
           +   PV         EG+ S RWK          ++ T T +  +P    T PT  A   
Sbjct: 216 NVEMPVTPSTVELVDEGSTSLRWKRRHFLPPLHPLQNTDTAAGFIPCAVHTDPTPVALSL 275

Query: 157 --------NNSLACVSDVANQQQCPKSRAKQCQFSGCTKGSRSPTKFCIGHGGGKRCQK 5
                    +S++   +  N QQ   +  K CQ  GC +G+R  +  CI HGGG+RC +
Sbjct: 276 PPTVIVMPESSVSSALETTNGQQQRSTSVKTCQVEGCWRGARGASGRCIAHGGGRRCHR 334


>ref|XP_002509888.1| transcription factor, putative [Ricinus communis]
           gi|223549787|gb|EEF51275.1| transcription factor,
           putative [Ricinus communis]
          Length = 677

 Score = 81.3 bits (199), Expect = 2e-13
 Identities = 60/188 (31%), Positives = 93/188 (49%), Gaps = 18/188 (9%)
 Frame = -2

Query: 514 NEESSVDIGLSINLSFNGNRRVEKRNKYSDKASTLVLERSEPHLELNLSTYPSESNITTI 335
           +EESS+D+ L   L   GN ++    K ++     +  + +  LEL+LST PSES++T+I
Sbjct: 109 DEESSIDLELDFALHL-GNEKMSSPKKSANSNLKGLELQPKVDLELSLSTGPSESDVTSI 167

Query: 334 TQAS--------IRFQESATQPVGEGTISSRWKLWXXXXXX*NMEMTTISSLVPSNY--- 188
             +S        +R        V EGTIS  WK         + + +   + VP      
Sbjct: 168 YPSSTSLDFGMEMRHAIYGASSVDEGTISCGWKT--GIALLASQDKSFFFNQVPKTSDPI 225

Query: 187 -----ITGPTATAPLNNSLACVSDVANQQQCPK--SRAKQCQFSGCTKGSRSPTKFCIGH 29
                ++    TAP++ S+ C S +  +QQ  +  S +K C+  GC KG+R  +  CI H
Sbjct: 226 SVLPDLSSSVITAPVS-SVTCTSGITQRQQPHQRSSNSKLCEVEGCGKGARGASGRCISH 284

Query: 28  GGGKRCQK 5
           GGG+RCQK
Sbjct: 285 GGGRRCQK 292


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