BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030824
         (690 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283668.2| PREDICTED: pentatricopeptide repeat-containi...    50   1e-08
ref|XP_004168621.1| PREDICTED: pentatricopeptide repeat-containi...    50   1e-08
ref|XP_004148433.1| PREDICTED: pentatricopeptide repeat-containi...    50   2e-08
ref|XP_002454518.1| hypothetical protein SORBIDRAFT_04g032600 [S...    39   4e-08
ref|XP_004135757.1| PREDICTED: putative pentatricopeptide repeat...    44   5e-08

>ref|XP_002283668.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 762

 Score = 50.4 bits (119), Expect(3) = 1e-08
 Identities = 22/36 (61%), Positives = 27/36 (75%)
 Frame = -3

Query: 505 NEITFVSLLSACAHAGLLDARLKIFDAMKNEYNIKP 398
           N+ITFV +LSAC+HAG++D  L  F  MKNEY I P
Sbjct: 483 NKITFVGVLSACSHAGMVDEALDYFQMMKNEYKITP 518



 Score = 27.7 bits (60), Expect(3) = 1e-08
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -3

Query: 688 PNKFTYSFVIKSCGWLMCHGLGKEVHRQT 602
           P+ FT+S V+  C  L+    G++VH QT
Sbjct: 381 PDLFTFSSVLSVCSSLVALEQGEQVHAQT 409



 Score = 25.8 bits (55), Expect(3) = 1e-08
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 7/43 (16%)
 Frame = -1

Query: 609 GKQVHGQSI-------IL*LRTLISMYLKCDNVSDAHNLFDQM 502
           G+QVH Q+I       ++    L++MY KC ++  A   F +M
Sbjct: 402 GEQVHAQTIKTGFLSDVVVGTALVNMYNKCGSIERASKAFVEM 444


>ref|XP_004168621.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 755

 Score = 50.4 bits (119), Expect(3) = 1e-08
 Identities = 21/36 (58%), Positives = 28/36 (77%)
 Frame = -3

Query: 505 NEITFVSLLSACAHAGLLDARLKIFDAMKNEYNIKP 398
           N++TFV +LSAC+HAGL D  L  F+ M+ +YNIKP
Sbjct: 478 NQVTFVGVLSACSHAGLADEALYYFELMQKQYNIKP 513



 Score = 28.9 bits (63), Expect(3) = 1e-08
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 7/45 (15%)
 Frame = -1

Query: 609 GKQVHGQSI-------IL*LRTLISMYLKCDNVSDAHNLFDQMKS 496
           G+Q+HGQ I       ++    L+SMY KC ++  A   F +M S
Sbjct: 397 GEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPS 441



 Score = 24.6 bits (52), Expect(3) = 1e-08
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -3

Query: 688 PNKFTYSFVIKSCGWLMCHGLGKEVHRQ 605
           P+ FT+S V+  C  L+    G+++H Q
Sbjct: 376 PDLFTFSSVLSVCSNLVALEQGEQIHGQ 403


>ref|XP_004148433.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 749

 Score = 50.4 bits (119), Expect(3) = 2e-08
 Identities = 21/36 (58%), Positives = 28/36 (77%)
 Frame = -3

Query: 505 NEITFVSLLSACAHAGLLDARLKIFDAMKNEYNIKP 398
           N++TFV +LSAC+HAGL D  L  F+ M+ +YNIKP
Sbjct: 472 NQVTFVGVLSACSHAGLADEALYYFELMQKQYNIKP 507



 Score = 28.9 bits (63), Expect(3) = 2e-08
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 7/45 (15%)
 Frame = -1

Query: 609 GKQVHGQSI-------IL*LRTLISMYLKCDNVSDAHNLFDQMKS 496
           G+Q+HGQ I       ++    L+SMY KC ++  A   F +M S
Sbjct: 391 GEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPS 435



 Score = 24.6 bits (52), Expect(3) = 2e-08
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -3

Query: 688 PNKFTYSFVIKSCGWLMCHGLGKEVHRQ 605
           P+ FT+S V+  C  L+    G+++H Q
Sbjct: 370 PDLFTFSSVLSVCSNLVALEQGEQIHGQ 397


>ref|XP_002454518.1| hypothetical protein SORBIDRAFT_04g032600 [Sorghum bicolor]
           gi|241934349|gb|EES07494.1| hypothetical protein
           SORBIDRAFT_04g032600 [Sorghum bicolor]
          Length = 834

 Score = 38.9 bits (89), Expect(3) = 4e-08
 Identities = 16/36 (44%), Positives = 23/36 (63%)
 Frame = -3

Query: 505 NEITFVSLLSACAHAGLLDARLKIFDAMKNEYNIKP 398
           N  TFV++L AC+H GLLD   + F  M + Y ++P
Sbjct: 633 NHATFVAVLRACSHVGLLDDGCRYFHLMTSRYKLEP 668



 Score = 33.5 bits (75), Expect(3) = 4e-08
 Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 7/45 (15%)
 Frame = -1

Query: 612 IGKQVHGQSIIL*L-------RTLISMYLKCDNVSDAHNLFDQMK 499
           +GKQ+HGQ I   +        TL+ MY KC N+ D+  +F++++
Sbjct: 551 LGKQIHGQIIKQEMLGDEFISSTLVDMYAKCGNMPDSQLMFEKVQ 595



 Score = 30.0 bits (66), Expect(3) = 4e-08
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -3

Query: 688 PNKFTYSFVIKSCGWLMCHGLGKEVHRQ 605
           P+ FTY+ V+ SC  L    LGK++H Q
Sbjct: 531 PDHFTYATVLDSCANLATIELGKQIHGQ 558


>ref|XP_004135757.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g56570-like [Cucumis sativus]
          Length = 606

 Score = 43.5 bits (101), Expect(3) = 5e-08
 Identities = 18/40 (45%), Positives = 26/40 (65%)
 Frame = -3

Query: 505 NEITFVSLLSACAHAGLLDARLKIFDAMKNEYNIKPDAAV 386
           + I F+ +L  C+HAGL+D  LK F +M  +YNI PD  +
Sbjct: 411 DRIVFMGVLCGCSHAGLVDKGLKYFRSMLEDYNINPDQEI 450



 Score = 35.0 bits (79), Expect(3) = 5e-08
 Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 7/43 (16%)
 Frame = -1

Query: 609 GKQVHGQSI-------IL*LRTLISMYLKCDNVSDAHNLFDQM 502
           G+QVHG  +       +  + +LI MY KC ++SD+H LF  M
Sbjct: 330 GQQVHGGIVRRGFDKNVALINSLIDMYAKCGSISDSHKLFCDM 372



 Score = 23.5 bits (49), Expect(3) = 5e-08
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -3

Query: 688 PNKFTYSFVIKSCGWLMCHGLGKEVH 611
           PN FT++ +  +C  L     G++VH
Sbjct: 309 PNCFTFTSITAACANLAVLSCGQQVH 334