BLASTX nr result

ID: Bupleurum21_contig00030810 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030810
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633296.1| PREDICTED: putative pentatricopeptide repeat...   152   2e-35
emb|CBI28823.3| unnamed protein product [Vitis vinifera]              152   2e-35
emb|CAN60147.1| hypothetical protein VITISV_041924 [Vitis vinifera]   152   2e-35
ref|XP_003633297.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   152   3e-35
ref|XP_002332100.1| predicted protein [Populus trichocarpa] gi|2...   131   7e-29

>ref|XP_003633296.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g10330-like [Vitis vinifera]
          Length = 531

 Score =  152 bits (385), Expect = 2e-35
 Identities = 71/106 (66%), Positives = 86/106 (81%)
 Frame = -3

Query: 320 VFDEILEPCIVSYNAMIDALCKNGDMGSALLVFENMPVRDIVSWTSVINGYAVNQCFQEA 141
           VF+EI  PC+VS NAM+DAL KNGDMGSAL +FE+MP RD+VSWTS+ING+  N+CF+EA
Sbjct: 152 VFEEISRPCVVSSNAMLDALGKNGDMGSALFLFESMPERDVVSWTSIINGFGRNRCFEEA 211

Query: 140 VDFFRIMIGHGDVRDFTIKPNEATYVSVLSSCANLQGGVGVHQGKQ 3
           + FF  M+GH DVR   +KPNEAT+VSVLSSC NL G   +HQGKQ
Sbjct: 212 IQFFVKMMGHEDVRSCLVKPNEATFVSVLSSCTNLDGVGALHQGKQ 257


>emb|CBI28823.3| unnamed protein product [Vitis vinifera]
          Length = 410

 Score =  152 bits (385), Expect = 2e-35
 Identities = 71/106 (66%), Positives = 86/106 (81%)
 Frame = -3

Query: 320 VFDEILEPCIVSYNAMIDALCKNGDMGSALLVFENMPVRDIVSWTSVINGYAVNQCFQEA 141
           VF+EI  PC+VS NAM+DAL KNGDMGSAL +FE+MP RD+VSWTS+ING+  N+CF+EA
Sbjct: 152 VFEEISRPCVVSSNAMLDALGKNGDMGSALFLFESMPERDVVSWTSIINGFGRNRCFEEA 211

Query: 140 VDFFRIMIGHGDVRDFTIKPNEATYVSVLSSCANLQGGVGVHQGKQ 3
           + FF  M+GH DVR   +KPNEAT+VSVLSSC NL G   +HQGKQ
Sbjct: 212 IQFFVKMMGHEDVRSCLVKPNEATFVSVLSSCTNLDGVGALHQGKQ 257


>emb|CAN60147.1| hypothetical protein VITISV_041924 [Vitis vinifera]
          Length = 480

 Score =  152 bits (385), Expect = 2e-35
 Identities = 71/106 (66%), Positives = 86/106 (81%)
 Frame = -3

Query: 320 VFDEILEPCIVSYNAMIDALCKNGDMGSALLVFENMPVRDIVSWTSVINGYAVNQCFQEA 141
           VF+EI  PC+VS NAM+DAL KNGDMGSAL +FE+MP RD+VSWTS+ING+  N+CF+EA
Sbjct: 60  VFEEISRPCVVSSNAMLDALGKNGDMGSALFLFESMPERDVVSWTSIINGFGRNRCFEEA 119

Query: 140 VDFFRIMIGHGDVRDFTIKPNEATYVSVLSSCANLQGGVGVHQGKQ 3
           + FF  M+GH DVR   +KPNEAT+VSVLSSC NL G   +HQGKQ
Sbjct: 120 IQFFVKMMGHEDVRSCLVKPNEATFVSVLSSCTNLDGVGALHQGKQ 165


>ref|XP_003633297.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g10330-like [Vitis
           vinifera]
          Length = 454

 Score =  152 bits (384), Expect = 3e-35
 Identities = 71/106 (66%), Positives = 86/106 (81%)
 Frame = -3

Query: 320 VFDEILEPCIVSYNAMIDALCKNGDMGSALLVFENMPVRDIVSWTSVINGYAVNQCFQEA 141
           VF+EI  PC+VS NAM+DAL KNGDMGSAL +FE+MP RD+VSWTS+ING+  N+CF+EA
Sbjct: 124 VFEEISRPCVVSSNAMLDALGKNGDMGSALXLFESMPERDVVSWTSIINGFGRNRCFEEA 183

Query: 140 VDFFRIMIGHGDVRDFTIKPNEATYVSVLSSCANLQGGVGVHQGKQ 3
           + FF  M+GH DVR   +KPNEAT+VSVLSSC NL G   +HQGKQ
Sbjct: 184 IQFFVKMMGHEDVRSCLVKPNEATFVSVLSSCTNLDGVGALHQGKQ 229


>ref|XP_002332100.1| predicted protein [Populus trichocarpa] gi|222874920|gb|EEF12051.1|
           predicted protein [Populus trichocarpa]
          Length = 474

 Score =  131 bits (329), Expect = 7e-29
 Identities = 67/106 (63%), Positives = 78/106 (73%)
 Frame = -3

Query: 320 VFDEILEPCIVSYNAMIDALCKNGDMGSALLVFENMPVRDIVSWTSVINGYAVNQCFQEA 141
           VFDEI  PCIV YNA +DA  KNGDMGSA  +F++MP RD+VSWTSVING+A N  F EA
Sbjct: 144 VFDEISHPCIVEYNATLDAYAKNGDMGSACCLFKSMPKRDVVSWTSVINGFAKNGLFGEA 203

Query: 140 VDFFRIMIGHGDVRDFTIKPNEATYVSVLSSCANLQGGVGVHQGKQ 3
           +  FR M+ H DV+   +KPNEATYVSVLSSCANL     +  GKQ
Sbjct: 204 IRLFREMMLHDDVKCCFVKPNEATYVSVLSSCANLDERGVLCIGKQ 249


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