BLASTX nr result

ID: Bupleurum21_contig00030805 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030805
         (991 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD99219.1| polypeptide with a gag-like domain [Petunia x hy...   172   1e-56
emb|CAN74819.1| hypothetical protein VITISV_034590 [Vitis vinifera]   149   9e-46
emb|CAA72989.1| unnamed protein product [Brassica oleracea var. ...   147   1e-45
emb|CAN74230.1| hypothetical protein VITISV_000585 [Vitis vinifera]   138   1e-44
emb|CAN81001.1| hypothetical protein VITISV_006992 [Vitis vinifera]   134   3e-44

>dbj|BAD99219.1| polypeptide with a gag-like domain [Petunia x hybrida]
          Length = 463

 Score =  172 bits (436), Expect(2) = 1e-56
 Identities = 75/144 (52%), Positives = 106/144 (73%)
 Frame = -1

Query: 703 DQDNPLFLQSSDSPGMKLVNDCFDGSGYSNWKRSMIIALSARNKLGFIDGTIPKPSSESS 524
           D ++P +L SSD+PGM L+N  FDGS Y NWKR ++I+LSA+NKLGFI G   KP  E  
Sbjct: 32  DINHPYYLASSDAPGMNLINTSFDGSSYGNWKRGVLISLSAKNKLGFITGAYKKPDKEDL 91

Query: 523 TFKTWSRCNDMVISWILSSLSKQIARSVIYTNSACQMWKELEERYGTPSGAQLFGLHKSL 344
            F+ W RC+DMV++W+L+SLSK+IA SV+Y+ +A ++W+ELE+RYG   G ++F L + L
Sbjct: 92  LFEQWRRCSDMVLAWLLNSLSKEIAESVLYSQTAQELWQELEQRYGQIDGTKMFQLQREL 151

Query: 343 GEISQGNANIADYFTKLKVLWDDI 272
             +SQG  ++A YF KLK +WD +
Sbjct: 152 NNVSQGTNDVAAYFNKLKRIWDQM 175



 Score = 74.7 bits (182), Expect(2) = 1e-56
 Identities = 33/64 (51%), Positives = 46/64 (71%)
 Frame = -3

Query: 245 SCGCTCGAAAKLSSFQQNQRVIQFLMGLNDSYTVMRGSILMSSPLPSIGQVYNLLLQEET 66
           SC C C A    +  Q++Q++IQFLMGLN+ Y+ +RG+ILM  PLPS  Q Y+++  EET
Sbjct: 185 SCECNCEAKGHNAKMQEDQQLIQFLMGLNEVYSGIRGNILMMKPLPSTAQAYSIISHEET 244

Query: 65  QRGV 54
           QRG+
Sbjct: 245 QRGI 248


>emb|CAN74819.1| hypothetical protein VITISV_034590 [Vitis vinifera]
          Length = 970

 Score =  149 bits (375), Expect(2) = 9e-46
 Identities = 65/151 (43%), Positives = 106/151 (70%)
 Frame = -1

Query: 724 NNSNTRFDQDNPLFLQSSDSPGMKLVNDCFDGSGYSNWKRSMIIALSARNKLGFIDGTIP 545
           N+ ++  D  +P FL + D PG+ LV+    G+ Y+ W R+M++AL+A+NK+ FIDG+IP
Sbjct: 16  NSLSSMEDSTSPYFLHNLDHPGIVLVSHHLTGANYNTWSRAMVMALTAKNKISFIDGSIP 75

Query: 544 KPSSESSTFKTWSRCNDMVISWILSSLSKQIARSVIYTNSACQMWKELEERYGTPSGAQL 365
            P S+   F TW RCN MVISWIL+S+ K IA S++Y ++A  +W +L +R+   +G ++
Sbjct: 76  CPESDDLLFGTWIRCNSMVISWILNSVHKDIADSLLYFDTAVGIWNDLRDRFCQSNGPRI 135

Query: 364 FGLHKSLGEISQGNANIADYFTKLKVLWDDI 272
           F + K L  +SQG+ +++ Y+T+LK+LWD++
Sbjct: 136 FQIKKHLIALSQGSLDVSTYYTRLKILWDEL 166



 Score = 62.0 bits (149), Expect(2) = 9e-46
 Identities = 28/62 (45%), Positives = 39/62 (62%)
 Frame = -3

Query: 236 CTCGAAAKLSSFQQNQRVIQFLMGLNDSYTVMRGSILMSSPLPSIGQVYNLLLQEETQRG 57
           C CG       FQQ + V+QFLMGLN+S+   R  ILM  PLP I +V++L+ Q+E Q  
Sbjct: 175 CACGTMKTWMEFQQQEYVMQFLMGLNESFVQTRSQILMMEPLPPIAKVFSLVAQDERQCS 234

Query: 56  VH 51
           ++
Sbjct: 235 IN 236


>emb|CAA72989.1| unnamed protein product [Brassica oleracea var. acephala]
          Length = 1131

 Score =  147 bits (370), Expect(2) = 1e-45
 Identities = 61/143 (42%), Positives = 101/143 (70%)
 Frame = -1

Query: 694 NPLFLQSSDSPGMKLVNDCFDGSGYSNWKRSMIIALSARNKLGFIDGTIPKPSSESSTFK 515
           +PLF+ ++D PG++L++   DGS Y +W  +M IAL A+NK+GF+DGT+ +P +   TF+
Sbjct: 13  SPLFMHNADHPGLQLISLKLDGSNYDDWNAAMKIALDAKNKIGFVDGTLTRPDTSDPTFR 72

Query: 514 TWSRCNDMVISWILSSLSKQIARSVIYTNSACQMWKELEERYGTPSGAQLFGLHKSLGEI 335
            WSRCN MV SW+L+S+S QI RS++  N A  +W++L  R+   +  + F L + + ++
Sbjct: 73  LWSRCNSMVKSWLLNSVSPQIYRSILRLNDAADIWRDLHGRFHMTNLPRTFNLTQEIQDL 132

Query: 334 SQGNANIADYFTKLKVLWDDIDS 266
            QG+ +++DY+T LK LWD+++S
Sbjct: 133 KQGSMSLSDYYTTLKTLWDNLES 155



 Score = 63.5 bits (153), Expect(2) = 1e-45
 Identities = 27/60 (45%), Positives = 41/60 (68%)
 Frame = -3

Query: 236 CTCGAAAKLSSFQQNQRVIQFLMGLNDSYTVMRGSILMSSPLPSIGQVYNLLLQEETQRG 57
           C CG A KL       ++++FL GLNDSY ++R  I+M   LPS+ +VYN+L Q+++Q+G
Sbjct: 163 CVCGNAEKLQKKVDRAKIVKFLAGLNDSYAIIRRQIIMKKVLPSLVEVYNILDQDDSQKG 222


>emb|CAN74230.1| hypothetical protein VITISV_000585 [Vitis vinifera]
          Length = 334

 Score =  138 bits (348), Expect(2) = 1e-44
 Identities = 62/143 (43%), Positives = 95/143 (66%)
 Frame = -1

Query: 694 NPLFLQSSDSPGMKLVNDCFDGSGYSNWKRSMIIALSARNKLGFIDGTIPKPSSESSTFK 515
           +P  L  SD PGM LV+   +G  YS W R+M I+LSA++K+GF+ G+I  PSS   +F 
Sbjct: 19  DPFSLHHSDHPGMVLVSKVLEGDNYSTWSRAMRISLSAKDKIGFVTGSIKPPSSTDDSFP 78

Query: 514 TWSRCNDMVISWILSSLSKQIARSVIYTNSACQMWKELEERYGTPSGAQLFGLHKSLGEI 335
           +W RCNDMVISW+L+S+   IA SVIY  +A ++W +L ER+   + ++++ + + + E 
Sbjct: 79  SWQRCNDMVISWLLNSIHPDIASSVIYAETASEIWADLRERFSQGNDSRIYQIKRDIVEH 138

Query: 334 SQGNANIADYFTKLKVLWDDIDS 266
            QG  +I+ Y+TKLK   D++ S
Sbjct: 139 RQGQQSISVYYTKLKAFXDELSS 161



 Score = 68.9 bits (167), Expect(2) = 1e-44
 Identities = 31/58 (53%), Positives = 40/58 (68%)
 Frame = -3

Query: 236 CTCGAAAKLSSFQQNQRVIQFLMGLNDSYTVMRGSILMSSPLPSIGQVYNLLLQEETQ 63
           C+CG   KL    + +RV+QFLMGLNDSY  +RG IL+  PLP    VY+L+LQ+E Q
Sbjct: 168 CSCGGLEKLKERDEKERVMQFLMGLNDSYAAIRGQILLMXPLPDTRXVYSLVLQQEKQ 225


>emb|CAN81001.1| hypothetical protein VITISV_006992 [Vitis vinifera]
          Length = 1131

 Score =  134 bits (338), Expect(2) = 3e-44
 Identities = 58/133 (43%), Positives = 90/133 (67%)
 Frame = -1

Query: 664 PGMKLVNDCFDGSGYSNWKRSMIIALSARNKLGFIDGTIPKPSSESSTFKTWSRCNDMVI 485
           PGM LV+   +G  YS W R+M I+LSA++K+GF+ G+I  PSS   +F +W RCNDMVI
Sbjct: 26  PGMVLVSKVLEGDNYSTWSRAMRISLSAKDKIGFVTGSIKPPSSTDDSFPSWQRCNDMVI 85

Query: 484 SWILSSLSKQIARSVIYTNSACQMWKELEERYGTPSGAQLFGLHKSLGEISQGNANIADY 305
           SW+L+S+   IA SVIY  +  ++W +L ER+   + ++++ + + + E  QG  +I+ Y
Sbjct: 86  SWLLNSIHPDIASSVIYAETTSEIWADLRERFSQGNDSRIYQIKRDIVEHRQGQQSISVY 145

Query: 304 FTKLKVLWDDIDS 266
           +TKLK  WD++ S
Sbjct: 146 YTKLKAFWDELSS 158



 Score = 71.2 bits (173), Expect(2) = 3e-44
 Identities = 31/58 (53%), Positives = 41/58 (70%)
 Frame = -3

Query: 236 CTCGAAAKLSSFQQNQRVIQFLMGLNDSYTVMRGSILMSSPLPSIGQVYNLLLQEETQ 63
           C+CG   KL    + +RV+QFLMGLNDSY  +RG IL+  PLP   +VY+L+LQ+E Q
Sbjct: 165 CSCGGLEKLKEMDEKERVMQFLMGLNDSYAAIRGQILLMQPLPDTRRVYSLVLQQEKQ 222


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