BLASTX nr result
ID: Bupleurum21_contig00030779
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00030779 (397 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFJ66185.1| hypothetical protein 11M19.3 [Arabidopsis halleri] 134 8e-30 ref|NP_199912.2| pentatricopeptide repeat-containing protein [Ar... 134 8e-30 dbj|BAB08745.1| unnamed protein product [Arabidopsis thaliana] 134 8e-30 ref|XP_002864090.1| binding protein [Arabidopsis lyrata subsp. l... 133 2e-29 gb|AFJ66232.1| hypothetical protein 34G24.32 [Capsella rubella] 132 2e-29 >gb|AFJ66185.1| hypothetical protein 11M19.3 [Arabidopsis halleri] Length = 511 Score = 134 bits (337), Expect = 8e-30 Identities = 59/85 (69%), Positives = 71/85 (83%) Frame = -1 Query: 397 VLMDISEEEKEQNLNYHSEKXXXXXXXLKSSPGTDIQVSNNLRTCIDCHYWMKIVSKILN 218 VLMD+SEEEKE+NLNYHSEK LKSSPGT+I++ N+R C DCH W+K VSK+LN Sbjct: 427 VLMDVSEEEKEENLNYHSEKLALAYVILKSSPGTEIRIQKNIRMCSDCHNWIKAVSKLLN 486 Query: 217 RVIVVRDRIRFHRFKDGLCTCGDYW 143 RVI++RDRIRFHRF+DGLC+C DYW Sbjct: 487 RVIIMRDRIRFHRFEDGLCSCKDYW 511 >ref|NP_199912.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gi|223635749|sp|Q9FI49.2|PP428_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g50990 gi|332008636|gb|AED96019.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] Length = 534 Score = 134 bits (337), Expect = 8e-30 Identities = 59/85 (69%), Positives = 71/85 (83%) Frame = -1 Query: 397 VLMDISEEEKEQNLNYHSEKXXXXXXXLKSSPGTDIQVSNNLRTCIDCHYWMKIVSKILN 218 VLMD+SEEEKE+NLNYHSEK LKSSPGT+I++ N+R C DCH W+K VSK+LN Sbjct: 450 VLMDVSEEEKEENLNYHSEKLALAYVILKSSPGTEIRIQKNIRMCSDCHNWIKAVSKLLN 509 Query: 217 RVIVVRDRIRFHRFKDGLCTCGDYW 143 RVI++RDRIRFHRF+DGLC+C DYW Sbjct: 510 RVIIMRDRIRFHRFEDGLCSCRDYW 534 >dbj|BAB08745.1| unnamed protein product [Arabidopsis thaliana] Length = 511 Score = 134 bits (337), Expect = 8e-30 Identities = 59/85 (69%), Positives = 71/85 (83%) Frame = -1 Query: 397 VLMDISEEEKEQNLNYHSEKXXXXXXXLKSSPGTDIQVSNNLRTCIDCHYWMKIVSKILN 218 VLMD+SEEEKE+NLNYHSEK LKSSPGT+I++ N+R C DCH W+K VSK+LN Sbjct: 427 VLMDVSEEEKEENLNYHSEKLALAYVILKSSPGTEIRIQKNIRMCSDCHNWIKAVSKLLN 486 Query: 217 RVIVVRDRIRFHRFKDGLCTCGDYW 143 RVI++RDRIRFHRF+DGLC+C DYW Sbjct: 487 RVIIMRDRIRFHRFEDGLCSCRDYW 511 >ref|XP_002864090.1| binding protein [Arabidopsis lyrata subsp. lyrata] gi|297309925|gb|EFH40349.1| binding protein [Arabidopsis lyrata subsp. lyrata] Length = 534 Score = 133 bits (334), Expect = 2e-29 Identities = 59/85 (69%), Positives = 70/85 (82%) Frame = -1 Query: 397 VLMDISEEEKEQNLNYHSEKXXXXXXXLKSSPGTDIQVSNNLRTCIDCHYWMKIVSKILN 218 VLMD+SEEEKE+NLNYHSEK LKSSPGT+I++ N+R C DCH W+K VSK+LN Sbjct: 450 VLMDVSEEEKEENLNYHSEKLALAYVILKSSPGTEIRIQKNIRMCSDCHNWIKAVSKLLN 509 Query: 217 RVIVVRDRIRFHRFKDGLCTCGDYW 143 RVI +RDRIRFHRF+DGLC+C DYW Sbjct: 510 RVITMRDRIRFHRFEDGLCSCKDYW 534 >gb|AFJ66232.1| hypothetical protein 34G24.32 [Capsella rubella] Length = 598 Score = 132 bits (333), Expect = 2e-29 Identities = 58/85 (68%), Positives = 71/85 (83%) Frame = -1 Query: 397 VLMDISEEEKEQNLNYHSEKXXXXXXXLKSSPGTDIQVSNNLRTCIDCHYWMKIVSKILN 218 VLMD+SEEEKE+NLNYHSEK LKSSPG++I++ N+R C DCH W+K VSK+LN Sbjct: 514 VLMDVSEEEKEENLNYHSEKLALAYVILKSSPGSEIRIQKNIRMCSDCHNWIKAVSKLLN 573 Query: 217 RVIVVRDRIRFHRFKDGLCTCGDYW 143 RVI++RDRIRFHRF+DGLC+C DYW Sbjct: 574 RVIIMRDRIRFHRFEDGLCSCKDYW 598