BLASTX nr result

ID: Bupleurum21_contig00030779 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030779
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFJ66185.1| hypothetical protein 11M19.3 [Arabidopsis halleri]     134   8e-30
ref|NP_199912.2| pentatricopeptide repeat-containing protein [Ar...   134   8e-30
dbj|BAB08745.1| unnamed protein product [Arabidopsis thaliana]        134   8e-30
ref|XP_002864090.1| binding protein [Arabidopsis lyrata subsp. l...   133   2e-29
gb|AFJ66232.1| hypothetical protein 34G24.32 [Capsella rubella]       132   2e-29

>gb|AFJ66185.1| hypothetical protein 11M19.3 [Arabidopsis halleri]
          Length = 511

 Score =  134 bits (337), Expect = 8e-30
 Identities = 59/85 (69%), Positives = 71/85 (83%)
 Frame = -1

Query: 397 VLMDISEEEKEQNLNYHSEKXXXXXXXLKSSPGTDIQVSNNLRTCIDCHYWMKIVSKILN 218
           VLMD+SEEEKE+NLNYHSEK       LKSSPGT+I++  N+R C DCH W+K VSK+LN
Sbjct: 427 VLMDVSEEEKEENLNYHSEKLALAYVILKSSPGTEIRIQKNIRMCSDCHNWIKAVSKLLN 486

Query: 217 RVIVVRDRIRFHRFKDGLCTCGDYW 143
           RVI++RDRIRFHRF+DGLC+C DYW
Sbjct: 487 RVIIMRDRIRFHRFEDGLCSCKDYW 511


>ref|NP_199912.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|223635749|sp|Q9FI49.2|PP428_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g50990 gi|332008636|gb|AED96019.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 534

 Score =  134 bits (337), Expect = 8e-30
 Identities = 59/85 (69%), Positives = 71/85 (83%)
 Frame = -1

Query: 397 VLMDISEEEKEQNLNYHSEKXXXXXXXLKSSPGTDIQVSNNLRTCIDCHYWMKIVSKILN 218
           VLMD+SEEEKE+NLNYHSEK       LKSSPGT+I++  N+R C DCH W+K VSK+LN
Sbjct: 450 VLMDVSEEEKEENLNYHSEKLALAYVILKSSPGTEIRIQKNIRMCSDCHNWIKAVSKLLN 509

Query: 217 RVIVVRDRIRFHRFKDGLCTCGDYW 143
           RVI++RDRIRFHRF+DGLC+C DYW
Sbjct: 510 RVIIMRDRIRFHRFEDGLCSCRDYW 534


>dbj|BAB08745.1| unnamed protein product [Arabidopsis thaliana]
          Length = 511

 Score =  134 bits (337), Expect = 8e-30
 Identities = 59/85 (69%), Positives = 71/85 (83%)
 Frame = -1

Query: 397 VLMDISEEEKEQNLNYHSEKXXXXXXXLKSSPGTDIQVSNNLRTCIDCHYWMKIVSKILN 218
           VLMD+SEEEKE+NLNYHSEK       LKSSPGT+I++  N+R C DCH W+K VSK+LN
Sbjct: 427 VLMDVSEEEKEENLNYHSEKLALAYVILKSSPGTEIRIQKNIRMCSDCHNWIKAVSKLLN 486

Query: 217 RVIVVRDRIRFHRFKDGLCTCGDYW 143
           RVI++RDRIRFHRF+DGLC+C DYW
Sbjct: 487 RVIIMRDRIRFHRFEDGLCSCRDYW 511


>ref|XP_002864090.1| binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297309925|gb|EFH40349.1| binding protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 534

 Score =  133 bits (334), Expect = 2e-29
 Identities = 59/85 (69%), Positives = 70/85 (82%)
 Frame = -1

Query: 397 VLMDISEEEKEQNLNYHSEKXXXXXXXLKSSPGTDIQVSNNLRTCIDCHYWMKIVSKILN 218
           VLMD+SEEEKE+NLNYHSEK       LKSSPGT+I++  N+R C DCH W+K VSK+LN
Sbjct: 450 VLMDVSEEEKEENLNYHSEKLALAYVILKSSPGTEIRIQKNIRMCSDCHNWIKAVSKLLN 509

Query: 217 RVIVVRDRIRFHRFKDGLCTCGDYW 143
           RVI +RDRIRFHRF+DGLC+C DYW
Sbjct: 510 RVITMRDRIRFHRFEDGLCSCKDYW 534


>gb|AFJ66232.1| hypothetical protein 34G24.32 [Capsella rubella]
          Length = 598

 Score =  132 bits (333), Expect = 2e-29
 Identities = 58/85 (68%), Positives = 71/85 (83%)
 Frame = -1

Query: 397 VLMDISEEEKEQNLNYHSEKXXXXXXXLKSSPGTDIQVSNNLRTCIDCHYWMKIVSKILN 218
           VLMD+SEEEKE+NLNYHSEK       LKSSPG++I++  N+R C DCH W+K VSK+LN
Sbjct: 514 VLMDVSEEEKEENLNYHSEKLALAYVILKSSPGSEIRIQKNIRMCSDCHNWIKAVSKLLN 573

Query: 217 RVIVVRDRIRFHRFKDGLCTCGDYW 143
           RVI++RDRIRFHRF+DGLC+C DYW
Sbjct: 574 RVIIMRDRIRFHRFEDGLCSCKDYW 598


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