BLASTX nr result

ID: Bupleurum21_contig00030751 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030751
         (846 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15033.3| unnamed protein product [Vitis vinifera]              363   3e-98
emb|CAN63572.1| hypothetical protein VITISV_037238 [Vitis vinifera]   361   1e-97
ref|XP_003601261.1| Serine/threonine protein kinase ATM [Medicag...   314   1e-83
ref|XP_002875882.1| hypothetical protein ARALYDRAFT_323420 [Arab...   301   2e-79
emb|CAB86487.1| ataxia-telangiectasia mutated protein (Atm) [Ara...   300   3e-79

>emb|CBI15033.3| unnamed protein product [Vitis vinifera]
          Length = 3085

 Score =  363 bits (932), Expect = 3e-98
 Identities = 180/284 (63%), Positives = 223/284 (78%), Gaps = 6/284 (2%)
 Frame = -2

Query: 845 SKKRPPKLIFAKTLRVVVQRAEDVNFSGSLF-LLPVAQYLFDHIMDVLSDVPSFHLEYGT 669
           SKKR PKL+FAKTLR+VVQRAED  FSG +  LL V + LF HI DVL D+PSF  EYG 
Sbjct: 83  SKKRLPKLVFAKTLRIVVQRAEDAKFSGKMLPLLTVVKPLFSHISDVLRDIPSFQSEYGI 142

Query: 668 ILRHLIGSRHYKFHMRKRVYGSLVLLYMKKVETSLSSDDNYQTKTSEEISRSIQTLHNLL 489
           +LRH++  R Y+FHMR RVY +LVLLYM KVETS S   N Q    EE+ R + TLH+LL
Sbjct: 143 MLRHILAVRDYRFHMRNRVYCNLVLLYMGKVETSFSEKSNSQYNPKEEVFRCVLTLHSLL 202

Query: 488 ENPPRDFPDNLQKDIVKGFVGIFSYVRKDGKIARKLVECINTYLLKDGPNLGCQSLELHH 309
           ENPP DFPDNL++D VKGF+GIFS++R +GKIARKL+ECIN +LLKDGPNLGCQ LE+H+
Sbjct: 203 ENPPGDFPDNLREDAVKGFIGIFSFLRDEGKIARKLIECINIFLLKDGPNLGCQCLEIHN 262

Query: 308 AVQQFILHSWSTTHDPGVKDSLILYARLQLNLTRGGSDESILLEQLMDVIGKELDQSHTC 129
           AVQQF+L SW T+HD G+KD++I YARLQLNLTRG +D S L+EQL+DV+G+ELDQ++  
Sbjct: 263 AVQQFVLRSWLTSHDRGLKDAVISYARLQLNLTRGAADGSPLVEQLLDVVGRELDQTNIS 322

Query: 128 NTT-----ALRDNKPRNLTTSECGLVDLAALVFYRACVNTSKPP 12
           +T+       +D++   LT+S+CGLV+LAALVFYRAC N  K P
Sbjct: 323 STSVPWSDTTKDDRLGTLTSSQCGLVELAALVFYRACANPLKAP 366


>emb|CAN63572.1| hypothetical protein VITISV_037238 [Vitis vinifera]
          Length = 432

 Score =  361 bits (927), Expect = 1e-97
 Identities = 179/284 (63%), Positives = 222/284 (78%), Gaps = 6/284 (2%)
 Frame = -2

Query: 845 SKKRPPKLIFAKTLRVVVQRAEDVNFSGSLF-LLPVAQYLFDHIMDVLSDVPSFHLEYGT 669
           SKKR PKL+FAKTLR+VVQRAED  FSG +  LL V + LF HI DVL D+PSF  EYG 
Sbjct: 83  SKKRLPKLVFAKTLRIVVQRAEDAKFSGKMLPLLTVVKPLFSHISDVLRDIPSFQSEYGI 142

Query: 668 ILRHLIGSRHYKFHMRKRVYGSLVLLYMKKVETSLSSDDNYQTKTSEEISRSIQTLHNLL 489
           +LRH++  R Y+FHMR RVY +LVLLYM KVETS S   N Q    EE+ R + TLH+LL
Sbjct: 143 MLRHILAVRDYRFHMRNRVYCNLVLLYMGKVETSFSEKSNSQYNPKEEVFRCVLTLHSLL 202

Query: 488 ENPPRDFPDNLQKDIVKGFVGIFSYVRKDGKIARKLVECINTYLLKDGPNLGCQSLELHH 309
           ENPP DFPDNL++D VKGF+GIFS++R +GKIARKL+ECIN +LLKDGPNLGCQ LE+H+
Sbjct: 203 ENPPGDFPDNLREDAVKGFIGIFSFLRDEGKIARKLIECINIFLLKDGPNLGCQCLEIHN 262

Query: 308 AVQQFILHSWSTTHDPGVKDSLILYARLQLNLTRGGSDESILLEQLMDVIGKELDQSHTC 129
           AVQQF+  SW T+HD G+KD++I YARLQLNLTRG +D S L+EQL+DV+G+ELDQ++  
Sbjct: 263 AVQQFVXRSWLTSHDRGLKDAVISYARLQLNLTRGAADGSPLVEQLLDVVGRELDQTNIS 322

Query: 128 NTT-----ALRDNKPRNLTTSECGLVDLAALVFYRACVNTSKPP 12
           +T+       +D++   LT+S+CGLV+LAALVFYRAC N  K P
Sbjct: 323 STSVPWSDTTKDDRLGTLTSSQCGLVELAALVFYRACANPLKAP 366


>ref|XP_003601261.1| Serine/threonine protein kinase ATM [Medicago truncatula]
            gi|355490309|gb|AES71512.1| Serine/threonine protein
            kinase ATM [Medicago truncatula]
          Length = 641

 Score =  314 bits (805), Expect = 1e-83
 Identities = 163/310 (52%), Positives = 219/310 (70%), Gaps = 29/310 (9%)
 Frame = -2

Query: 845  SKKRPPKLIFAKTLRVVVQRAEDVNFSGSLFLL------------------PVAQYLFDH 720
            SK+R PK+I+AKTLR++VQRAE+  +S   +LL                   V + LF+H
Sbjct: 106  SKRRNPKMIYAKTLRLIVQRAEEAKYSEFSYLLVTGVIAHVSAYSQILPLSSVVKPLFNH 165

Query: 719  IMDVLSDVPSFHLEYGTILRHLIGSRHYKFHMRKRVYGSLVLLYMKKVETSLSSDDNYQT 540
            + DVLS+VPSF  EYG ILRHL+  R Y F MRKR+Y SLVL+Y++KVE SL+  +    
Sbjct: 166  VSDVLSNVPSFQSEYGIILRHLLAVRDYSFQMRKRIYCSLVLMYIEKVEASLNGKNISHC 225

Query: 539  KTSEEISRSIQTLHNLLENPPRDFPDNLQKDIVKGFVGIFSYVRKDGKIARKLVECINTY 360
             + EE+ R+I TLH+LL+ PP D+P NL++DI KGFV I S++R++GK++RKLVECINTY
Sbjct: 226  TSKEEVFRNILTLHSLLDYPPGDYPVNLREDIAKGFVRICSFIREEGKVSRKLVECINTY 285

Query: 359  LLKDGPNLGCQSLELHHAVQQFILHSWSTTHDPGVKDSLILYARLQLNLTRGGSDESILL 180
            LL DGPNLGCQ LE+H A+QQF+ H W TTHD  +KDSL+ YAR QLNLTRG +D  +L+
Sbjct: 286  LLNDGPNLGCQLLEIHKAIQQFLFHCWLTTHDRVLKDSLMFYARTQLNLTRGAADRCLLV 345

Query: 179  EQLMDVIGKELDQSHTCNTTALR-----DNKPRNLTTSECGLVDLAALVFYR------AC 33
            EQL+DVI K+LDQ    +T+  R     D+K   L++S+CGLV+LAA++FYR      AC
Sbjct: 346  EQLLDVIYKDLDQGSMSSTSMPRGDGNKDDKLGTLSSSQCGLVELAAVLFYRVATRNSAC 405

Query: 32   VNTSKPPEAE 3
            +NT++   +E
Sbjct: 406  LNTTRASPSE 415


>ref|XP_002875882.1| hypothetical protein ARALYDRAFT_323420 [Arabidopsis lyrata subsp.
            lyrata] gi|297321720|gb|EFH52141.1| hypothetical protein
            ARALYDRAFT_323420 [Arabidopsis lyrata subsp. lyrata]
          Length = 3832

 Score =  301 bits (770), Expect = 2e-79
 Identities = 155/286 (54%), Positives = 201/286 (70%), Gaps = 5/286 (1%)
 Frame = -2

Query: 845  SKKRPPKLIFAKTLRVVVQRAEDVNFSGSLF-LLPVAQYLFDHIMDVLSDVPSFHLEYGT 669
            SK+R PK  FAKTLRVV+QR E+  F G  F LL +A+ LF H+ D+LS+ PSF  EYGT
Sbjct: 872  SKRRMPKPTFAKTLRVVIQRTEETKFPGVQFPLLSMAKTLFTHVHDILSNTPSFQSEYGT 931

Query: 668  ILRHLIGSRHYKFHMRKRVYGSLVLLYMKKVETSLSSDDNYQTKTSEEISRSIQTLHNLL 489
            ILRHL+  R Y+F MRKR Y SLVLLYM++ E   S   + Q    EE  R I TL +LL
Sbjct: 932  ILRHLLEIREYRFQMRKRTYSSLVLLYMERAEAGFSEKKSGQHSQKEEAFRYILTLQSLL 991

Query: 488  ENPPRDFPDNLQKDIVKGFVGIFSYVRKDGKIARKLVECINTYLLKDGPNLGCQSLELHH 309
            EN P DFPD+L+++IV G + IFS VR +GK++RKL+EC+NT+LLKDGPNLG  S E+H+
Sbjct: 992  ENSPGDFPDDLREEIVNGLIHIFSSVRDEGKLSRKLIECVNTFLLKDGPNLGSLSFEIHN 1051

Query: 308  AVQQFILHSWSTTHDPGVKDSLILYARLQLNLTRGGSDESILLEQLMDVIGKELDQSHTC 129
            AV+QF+   W TTHD  +K+ L+ Y RLQLNLTRG S+ S L+EQL+DV+ +ELD   + 
Sbjct: 1052 AVEQFVFRCWLTTHDKNLKEILVSYGRLQLNLTRGSSESSSLVEQLLDVVTRELDLGSSS 1111

Query: 128  NTTA----LRDNKPRNLTTSECGLVDLAALVFYRACVNTSKPPEAE 3
             + +     +D K   L + +  LV+LAA VFYRACVNTS+P  +E
Sbjct: 1112 TSASWGDTTKDEKLGALNSYQNSLVELAAHVFYRACVNTSRPSMSE 1157


>emb|CAB86487.1| ataxia-telangiectasia mutated protein (Atm) [Arabidopsis thaliana]
          Length = 3856

 Score =  300 bits (768), Expect = 3e-79
 Identities = 155/286 (54%), Positives = 204/286 (71%), Gaps = 5/286 (1%)
 Frame = -2

Query: 845  SKKRPPKLIFAKTLRVVVQRAEDVNFSGSLF-LLPVAQYLFDHIMDVLSDVPSFHLEYGT 669
            SK+R PK  FAKTLRVVVQR E+  F G  F LL +A+ LF H+ D+LS+ PSF  EYGT
Sbjct: 894  SKRRMPKPTFAKTLRVVVQRTEETKFPGVQFPLLSMAKTLFTHVHDILSNTPSFQSEYGT 953

Query: 668  ILRHLIGSRHYKFHMRKRVYGSLVLLYMKKVETSLSSDDNYQTKTSEEISRSIQTLHNLL 489
            ILRHL+  + Y+F MRKR Y SLVLLYM++ ET     ++ Q    EE  R I TL +LL
Sbjct: 954  ILRHLLEIKEYRFQMRKRTYSSLVLLYMERAETGFCEKNSGQHSQKEEAFRYILTLQSLL 1013

Query: 488  ENPPRDFPDNLQKDIVKGFVGIFSYVRKDGKIARKLVECINTYLLKDGPNLGCQSLELHH 309
            EN P DFPD+L+++IV G + IFS VR +GK++RKL+EC+NT+LLKDGPNLG  SLE+H+
Sbjct: 1014 ENSPGDFPDDLREEIVNGLIHIFSSVRDEGKLSRKLIECVNTFLLKDGPNLGSLSLEIHN 1073

Query: 308  AVQQFILHSWSTTHDPGVKDSLILYARLQLNLTRGGSDESILLEQLMDVIGKELDQSHTC 129
            AV+QF+   W TTHD  +K+ L+ Y RLQLNLTR  S+ S L+EQL+DV+ +ELD   + 
Sbjct: 1074 AVEQFVFRCWLTTHDKNLKEILVSYGRLQLNLTRDSSESSSLVEQLLDVVTRELDLGSSS 1133

Query: 128  NTTA----LRDNKPRNLTTSECGLVDLAALVFYRACVNTSKPPEAE 3
            ++ +     +D K   L++ +  LV+LAA VFYRACVNTS+P  +E
Sbjct: 1134 SSASWGDTTKDEKLGALSSYQNSLVELAAHVFYRACVNTSRPSLSE 1179


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