BLASTX nr result

ID: Bupleurum21_contig00030748 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030748
         (424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78493.1| hypothetical protein VITISV_037041 [Vitis vinifera]    74   1e-11
gb|ABG37658.1| integrase [Populus trichocarpa]                         55   6e-06

>emb|CAN78493.1| hypothetical protein VITISV_037041 [Vitis vinifera]
          Length = 1048

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 44/137 (32%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
 Frame = -2

Query: 423 DEAYELIEVMAANEYQNPTQRMTQHKVAGILEVDXXXXXXXXXXXLIMKVDALANIGFQQ 244
           DE Y+LI+VMA+N +   T R  Q +  G+ ++D                 A+ N  F++
Sbjct: 149 DEGYQLIKVMASNNFLKSTDRNAQKRTVGVHDIDVFNNLATQV--------AILNNNFKK 200

Query: 243 VASI------CELCAGNHSTQQCAIS-------MESAQFVSNYQRPPVPNAYHPNN--RN 109
           +  +      CE CAGNH + +C +         +   +V+N QR   PN+ + N   RN
Sbjct: 201 LNVVVVSNLVCENCAGNHPSLECQVGGPYEANPSKQVNYVANNQRQYNPNSNYFNQGWRN 260

Query: 108 HPNFSWSNNQNTVQQPA 58
           HPNFSWSNN +  + P+
Sbjct: 261 HPNFSWSNNAHVQKPPS 277


>gb|ABG37658.1| integrase [Populus trichocarpa]
          Length = 1139

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 43/148 (29%), Positives = 64/148 (43%), Gaps = 25/148 (16%)
 Frame = -2

Query: 423 DEAYELIEVMAANE--------YQNPTQRMTQHKVAGILEVDXXXXXXXXXXXLIMKVDA 268
           +EA E ++++A N         Y+ P++        G+  +            L  KV+A
Sbjct: 16  NEAMEYLDLLAENAQNWDTTGTYEAPSKTQPHTSSGGMYNLRENHDLQAKFASLAKKVEA 75

Query: 267 LANIGFQQVASI----CELCAGN-HSTQQCAISM-------ESAQFVSNYQRP---PVPN 133
           L      Q+ S+    C++C  N HST  C           E A  ++N+QRP   P   
Sbjct: 76  LELKKSGQLKSVQDIVCQICETNEHSTNDCPTLPSFKECLHEQAHALNNFQRPNHNPYSQ 135

Query: 132 AYHPNNRNHPNFSWSNNQNTVQ--QPAY 55
            Y+P  RNHPNFSW +  N  Q  QP +
Sbjct: 136 TYNPGWRNHPNFSWKSENNNAQTSQPPF 163


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