BLASTX nr result

ID: Bupleurum21_contig00030735 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030735
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31709.3| unnamed protein product [Vitis vinifera]              150   1e-34
ref|XP_002279262.1| PREDICTED: elongator complex protein 1 [Viti...   150   1e-34
emb|CAN82069.1| hypothetical protein VITISV_010008 [Vitis vinifera]   150   1e-34
ref|XP_002528452.1| conserved hypothetical protein [Ricinus comm...   148   5e-34
ref|XP_002315239.1| predicted protein [Populus trichocarpa] gi|2...   147   9e-34

>emb|CBI31709.3| unnamed protein product [Vitis vinifera]
          Length = 1200

 Score =  150 bits (378), Expect = 1e-34
 Identities = 68/106 (64%), Positives = 89/106 (83%)
 Frame = -1

Query: 335 ICWTLGGFITTYNFVWITAVMDNSTALVIDDSKILVTPLSISLIPPPMFMFQLRFPFAIR 156
           ICWTLGG +T  +FVW+TAVM+NSTALVID+SKIL TPLS+SL+PPPM++F L+F   IR
Sbjct: 330 ICWTLGGEVTVNSFVWVTAVMENSTALVIDESKILATPLSLSLMPPPMYLFNLKFSSTIR 389

Query: 155 EMAVWSKSSKNLLAVSLSDSSLCVVELPAVDSWEELDGREFNVEPS 18
           ++A ++K+SKNLLA  LSD  LCV ELP +D+WEEL+G+E +V+ S
Sbjct: 390 DIAFYTKNSKNLLAAFLSDGCLCVAELPPLDTWEELEGKELSVDAS 435


>ref|XP_002279262.1| PREDICTED: elongator complex protein 1 [Vitis vinifera]
          Length = 1316

 Score =  150 bits (378), Expect = 1e-34
 Identities = 68/106 (64%), Positives = 89/106 (83%)
 Frame = -1

Query: 335 ICWTLGGFITTYNFVWITAVMDNSTALVIDDSKILVTPLSISLIPPPMFMFQLRFPFAIR 156
           ICWTLGG +T  +FVW+TAVM+NSTALVID+SKIL TPLS+SL+PPPM++F L+F   IR
Sbjct: 330 ICWTLGGEVTVNSFVWVTAVMENSTALVIDESKILATPLSLSLMPPPMYLFNLKFSSTIR 389

Query: 155 EMAVWSKSSKNLLAVSLSDSSLCVVELPAVDSWEELDGREFNVEPS 18
           ++A ++K+SKNLLA  LSD  LCV ELP +D+WEEL+G+E +V+ S
Sbjct: 390 DIAFYTKNSKNLLAAFLSDGCLCVAELPPLDTWEELEGKELSVDAS 435


>emb|CAN82069.1| hypothetical protein VITISV_010008 [Vitis vinifera]
          Length = 1533

 Score =  150 bits (378), Expect = 1e-34
 Identities = 68/106 (64%), Positives = 89/106 (83%)
 Frame = -1

Query: 335 ICWTLGGFITTYNFVWITAVMDNSTALVIDDSKILVTPLSISLIPPPMFMFQLRFPFAIR 156
           ICWTLGG +T  +FVW+TAVM+NSTALVID+SKIL TPLS+SL+PPPM++F L+F   IR
Sbjct: 583 ICWTLGGEVTVNSFVWVTAVMENSTALVIDESKILATPLSLSLMPPPMYLFNLKFSSTIR 642

Query: 155 EMAVWSKSSKNLLAVSLSDSSLCVVELPAVDSWEELDGREFNVEPS 18
           ++A ++K+SKNLLA  LSD  LCV ELP +D+WEEL+G+E +V+ S
Sbjct: 643 DIAFYTKNSKNLLAAFLSDGCLCVAELPPLDTWEELEGKELSVDAS 688


>ref|XP_002528452.1| conserved hypothetical protein [Ricinus communis]
           gi|223532128|gb|EEF33935.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1335

 Score =  148 bits (373), Expect = 5e-34
 Identities = 69/104 (66%), Positives = 85/104 (81%)
 Frame = -1

Query: 335 ICWTLGGFITTYNFVWITAVMDNSTALVIDDSKILVTPLSISLIPPPMFMFQLRFPFAIR 156
           ICWTL G IT YNF+WI+AVM+NSTALVID+S ILVTPLS+SL+PPP+ +F L+FP A+R
Sbjct: 334 ICWTLEGQITIYNFMWISAVMENSTALVIDNSNILVTPLSLSLMPPPLHLFNLKFPSAVR 393

Query: 155 EMAVWSKSSKNLLAVSLSDSSLCVVELPAVDSWEELDGREFNVE 24
           ++A + K SKN +A  LSD  LCVVELP  D+WEELDG+E  VE
Sbjct: 394 DVAFYPKKSKNFVAAFLSDGCLCVVELPEFDTWEELDGKEIMVE 437


>ref|XP_002315239.1| predicted protein [Populus trichocarpa] gi|222864279|gb|EEF01410.1|
           predicted protein [Populus trichocarpa]
          Length = 1326

 Score =  147 bits (371), Expect = 9e-34
 Identities = 69/107 (64%), Positives = 88/107 (82%)
 Frame = -1

Query: 335 ICWTLGGFITTYNFVWITAVMDNSTALVIDDSKILVTPLSISLIPPPMFMFQLRFPFAIR 156
           ICWT GG IT YNF WI+AV +NSTALVIDDSKILVTPLS+SL+PPP+ +F L+FP A+R
Sbjct: 338 ICWTFGGQITIYNFTWISAVTENSTALVIDDSKILVTPLSLSLMPPPLHLFSLKFPSAVR 397

Query: 155 EMAVWSKSSKNLLAVSLSDSSLCVVELPAVDSWEELDGREFNVEPSL 15
           ++A++S +SKN +A  LSD SL VVELP  D+WE+L+ +EF VE S+
Sbjct: 398 DLALYSNNSKNRVAAFLSDGSLGVVELPDPDTWEDLEEKEFTVEASI 444


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