BLASTX nr result
ID: Bupleurum21_contig00030728
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00030728
(596 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002275696.2| PREDICTED: Werner syndrome ATP-dependent hel... 260 1e-67
ref|XP_002319444.1| predicted protein [Populus trichocarpa] gi|2... 253 2e-65
ref|XP_004149119.1| PREDICTED: ATP-dependent DNA helicase RecQ-l... 249 3e-64
ref|XP_003553162.1| PREDICTED: Werner syndrome ATP-dependent hel... 245 4e-63
ref|XP_003537375.1| PREDICTED: LOW QUALITY PROTEIN: Werner syndr... 245 5e-63
>ref|XP_002275696.2| PREDICTED: Werner syndrome ATP-dependent helicase-like [Vitis
vinifera]
Length = 913
Score = 260 bits (664), Expect = 1e-67
Identities = 124/203 (61%), Positives = 157/203 (77%), Gaps = 5/203 (2%)
Frame = +3
Query: 3 ENCGYCDNCTISKKVTDISKQAFLLMACIKSCGDRWGLNLPIDVLRGSRSKKIVDAQYDK 182
+ CG CDNCTISK+ D+S++AFLL+ACI SC WGLN+PID+LRGSRSK+I+DA++DK
Sbjct: 387 DKCGNCDNCTISKRECDMSREAFLLIACINSCRGHWGLNMPIDILRGSRSKRILDAKFDK 446
Query: 183 LPFHGLGKEVSANWWKNLASQLISFGFLNENLNDVYKTISVSSEGVHFLSSCTPDHQPPL 362
LP HGLGK+ S+NWWK LA QLIS+G+L E++ DVYKT+SVS +G FLSS TP HQP L
Sbjct: 447 LPLHGLGKDHSSNWWKALAYQLISYGYLMESVKDVYKTVSVSQKGAQFLSSSTPAHQPKL 506
Query: 363 LLP-----VGEEEHKNATGEGGEVNNVDFLKSEGLSEGEVKLYKMLLEERMKLARAAGIA 527
+L V +EEH+ +G+ GE+ + + EG SE E +LY MLL+ERMK AR G A
Sbjct: 507 VLQVTNEMVDDEEHEGTSGKFGELKGLATFEYEGFSETEGQLYHMLLDERMKFARGIGTA 566
Query: 528 PYAICGDQTIKKFVLVRPSTKAR 596
PYAICG++TIKK L+RPSTKAR
Sbjct: 567 PYAICGNETIKKIALIRPSTKAR 589
>ref|XP_002319444.1| predicted protein [Populus trichocarpa] gi|222857820|gb|EEE95367.1|
predicted protein [Populus trichocarpa]
Length = 854
Score = 253 bits (646), Expect = 2e-65
Identities = 119/203 (58%), Positives = 154/203 (75%), Gaps = 5/203 (2%)
Frame = +3
Query: 3 ENCGYCDNCTISKKVTDISKQAFLLMACIKSCGDRWGLNLPIDVLRGSRSKKIVDAQYDK 182
E CG CDNC +SK+ D+SK++FLLM+CI+SC WGLN+P+DVLRGSR+KKI++A +DK
Sbjct: 354 EKCGNCDNCMVSKRERDMSKESFLLMSCIQSCEGNWGLNMPVDVLRGSRAKKILNAHFDK 413
Query: 183 LPFHGLGKEVSANWWKNLASQLISFGFLNENLNDVYKTISVSSEGVHFLSSCTPDHQPPL 362
LPFHGLGK+ S+NWWK+LA QLIS G+L E D YK + VS +G ++ S PDHQP L
Sbjct: 414 LPFHGLGKDYSSNWWKSLAYQLISHGYLMETFRDTYKFVRVSPKGKQYIQSARPDHQPAL 473
Query: 363 LLP-----VGEEEHKNATGEGGEVNNVDFLKSEGLSEGEVKLYKMLLEERMKLARAAGIA 527
+LP V +EE + TG GE+N++ L+ E LSE E +++ MLL+ER KLA++ G A
Sbjct: 474 ILPLTDEMVEDEEQQCTTGGVGELNSMATLECEQLSEAEARIFHMLLDERTKLAKSIGTA 533
Query: 528 PYAICGDQTIKKFVLVRPSTKAR 596
PYA+CGDQTIKK LVRPSTKAR
Sbjct: 534 PYAVCGDQTIKKIALVRPSTKAR 556
>ref|XP_004149119.1| PREDICTED: ATP-dependent DNA helicase RecQ-like [Cucumis sativus]
Length = 906
Score = 249 bits (636), Expect = 3e-64
Identities = 128/225 (56%), Positives = 159/225 (70%), Gaps = 27/225 (12%)
Frame = +3
Query: 3 ENCGYCDNCTISKKVTDISKQAFLLMACIKSCGDRWGLNLPIDVLRGSRSKKIVDAQYDK 182
+ CG CDNC +SKK D+SK+AFLL+ACI+SC WGLN+ +D+LRGSR+KKI+D Q+DK
Sbjct: 388 DKCGNCDNCIVSKKERDMSKEAFLLLACIQSCWGTWGLNIYVDILRGSRAKKILDTQFDK 447
Query: 183 LPFHGLGKEVSANWWKNLASQLIS----------------------FGFLNENLNDVYKT 296
LP HGLGKE S+NWWK LASQLIS G+L EN+ DVY+T
Sbjct: 448 LPLHGLGKEYSSNWWKALASQLISNGSVLNATFLTKVLEKLKHFPKTGYLTENIRDVYRT 507
Query: 297 ISVSSEGVHFLSSCTPDHQPPLLLPV-----GEEEHKNATGEGGEVNNVDFLKSEGLSEG 461
I +S++G FL S D QPPL+LPV GE E +A E G+++N+ KS GLSE
Sbjct: 508 IGISAKGEQFLDSARQDCQPPLVLPVTSEMIGENEDDSALIEAGKMDNLATFKS-GLSEA 566
Query: 462 EVKLYKMLLEERMKLARAAGIAPYAICGDQTIKKFVLVRPSTKAR 596
E KL+++LLEERMKLAR+AG APYAICGDQTIK+ L+RPSTKAR
Sbjct: 567 EEKLFQLLLEERMKLARSAGTAPYAICGDQTIKRIALIRPSTKAR 611
>ref|XP_003553162.1| PREDICTED: Werner syndrome ATP-dependent helicase homolog [Glycine
max]
Length = 920
Score = 245 bits (626), Expect = 4e-63
Identities = 126/203 (62%), Positives = 152/203 (74%), Gaps = 5/203 (2%)
Frame = +3
Query: 3 ENCGYCDNCTISKKVTDISKQAFLLMACIKSCGDRWGLNLPIDVLRGSRSKKIVDAQYDK 182
+ CG CDNC IS+K D+S++AFLLMACI SC WGLN+PIDVLRGSR+KKI+D Q+DK
Sbjct: 393 DRCGNCDNCKISRKERDMSREAFLLMACIHSCRGIWGLNMPIDVLRGSRAKKILDVQFDK 452
Query: 183 LPFHGLGKEVSANWWKNLASQLISFGFLNENLNDVYKTISVSSEGVHFLSSCTPDHQPPL 362
LP HGLGK ANWWK L QLIS G+L E ++D Y+TISVSS+G FL+S PD+QPPL
Sbjct: 453 LPLHGLGKNYPANWWKALRHQLISQGYLKEIVSDRYRTISVSSKGEQFLASSRPDYQPPL 512
Query: 363 LLP-----VGEEEHKNATGEGGEVNNVDFLKSEGLSEGEVKLYKMLLEERMKLARAAGIA 527
+L +GEE++ N T E + +SEG SE E +LY+MLLEER+KLAR+ G A
Sbjct: 513 VLTLTAEMLGEEDNGN-TQEA--FKTLSTSESEGFSEAEGQLYQMLLEERLKLARSVGTA 569
Query: 528 PYAICGDQTIKKFVLVRPSTKAR 596
PYAICGDQTIKK L RPSTKAR
Sbjct: 570 PYAICGDQTIKKIALTRPSTKAR 592
>ref|XP_003537375.1| PREDICTED: LOW QUALITY PROTEIN: Werner syndrome ATP-dependent
helicase homolog [Glycine max]
Length = 920
Score = 245 bits (625), Expect = 5e-63
Identities = 125/202 (61%), Positives = 149/202 (73%), Gaps = 4/202 (1%)
Frame = +3
Query: 3 ENCGYCDNCTISKKVTDISKQAFLLMACIKSCGDRWGLNLPIDVLRGSRSKKIVDAQYDK 182
+ CG CDNC IS+K D+S++AFLLMACI SC WGLN+PIDVLRGSRSKKI+D Q+DK
Sbjct: 393 DRCGNCDNCKISRKERDMSREAFLLMACIHSCRGGWGLNMPIDVLRGSRSKKILDVQFDK 452
Query: 183 LPFHGLGKEVSANWWKNLASQLISFGFLNENLNDVYKTISVSSEGVHFLSSCTPDHQPPL 362
LP HGLGK ANWWK L QLIS G+L E L+ +Y+TISVSS+G FL+S PD++PPL
Sbjct: 453 LPLHGLGKNYPANWWKALGYQLISQGYLKEILSGIYRTISVSSKGEQFLASSRPDYKPPL 512
Query: 363 LLPVGEE----EHKNATGEGGEVNNVDFLKSEGLSEGEVKLYKMLLEERMKLARAAGIAP 530
+L + E E T E E + +SEG SE E +LY+MLLEER+KLAR+ G AP
Sbjct: 513 VLTLTAEMLGVEDNGNTKE--EFKTLSTSESEGFSEAEGQLYQMLLEERLKLARSVGTAP 570
Query: 531 YAICGDQTIKKFVLVRPSTKAR 596
YAICGDQTIKK L RPSTKAR
Sbjct: 571 YAICGDQTIKKIALPRPSTKAR 592