BLASTX nr result

ID: Bupleurum21_contig00030726 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030726
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329713.1| predicted protein [Populus trichocarpa] gi|2...   118   4e-25
ref|XP_003634326.1| PREDICTED: probable cyclic nucleotide-gated ...   118   6e-25
ref|XP_002270141.2| PREDICTED: probable cyclic nucleotide-gated ...   115   4e-24
ref|XP_002329712.1| predicted protein [Populus trichocarpa] gi|2...   115   4e-24
ref|XP_002524633.1| Cyclic nucleotide-gated ion channel, putativ...   115   5e-24

>ref|XP_002329713.1| predicted protein [Populus trichocarpa] gi|222870621|gb|EEF07752.1|
           predicted protein [Populus trichocarpa]
          Length = 785

 Score =  118 bits (296), Expect = 4e-25
 Identities = 50/83 (60%), Positives = 69/83 (83%)
 Frame = +1

Query: 1   RKNMKAPTVFEQRFPNINYGDAKGWAQRTFSSLYQYIPGVMNPHAKIVQNWNKFFVISCL 180
           +++ K  ++F+ +F ++ YGDAKGWA+R  +++  YIPGVMNPHAK+VQ WNKFFVISCL
Sbjct: 157 QRHAKTSSIFDSKFHSVLYGDAKGWARRFNNAINSYIPGVMNPHAKVVQKWNKFFVISCL 216

Query: 181 FAVFLDPLFFFLLSVNKNDKCIV 249
            A+F+DPLFF LLSV +++KCIV
Sbjct: 217 VAIFVDPLFFILLSVKQDEKCIV 239


>ref|XP_003634326.1| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
           chloroplastic-like [Vitis vinifera]
          Length = 783

 Score =  118 bits (295), Expect = 6e-25
 Identities = 50/82 (60%), Positives = 64/82 (78%)
 Frame = +1

Query: 4   KNMKAPTVFEQRFPNINYGDAKGWAQRTFSSLYQYIPGVMNPHAKIVQNWNKFFVISCLF 183
           K + A  +F  +F N  YGDA+GWA+R FSSL  Y+PG+MNPH K+VQ WN+FFVISCL 
Sbjct: 164 KLLAAYAIFSSKFHNAFYGDARGWARRFFSSLQSYVPGIMNPHTKVVQQWNRFFVISCLL 223

Query: 184 AVFLDPLFFFLLSVNKNDKCIV 249
           A+F+DPLFF LLSV + +KCI+
Sbjct: 224 AIFVDPLFFLLLSVQQENKCII 245


>ref|XP_002270141.2| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
           chloroplastic-like [Vitis vinifera]
          Length = 779

 Score =  115 bits (288), Expect = 4e-24
 Identities = 49/82 (59%), Positives = 64/82 (78%)
 Frame = +1

Query: 4   KNMKAPTVFEQRFPNINYGDAKGWAQRTFSSLYQYIPGVMNPHAKIVQNWNKFFVISCLF 183
           K+  A + F  +F +  YGDA+GWA+R FSSL  Y+PG+MNPH K+VQ WN+FFVISCL 
Sbjct: 158 KHCWASSYFSSKFHSAFYGDARGWARRFFSSLQSYVPGIMNPHTKVVQRWNRFFVISCLL 217

Query: 184 AVFLDPLFFFLLSVNKNDKCIV 249
           A+F+DPLFF LLSV + +KCI+
Sbjct: 218 AIFVDPLFFLLLSVQQENKCII 239


>ref|XP_002329712.1| predicted protein [Populus trichocarpa] gi|222870620|gb|EEF07751.1|
           predicted protein [Populus trichocarpa]
          Length = 781

 Score =  115 bits (288), Expect = 4e-24
 Identities = 48/83 (57%), Positives = 67/83 (80%)
 Frame = +1

Query: 1   RKNMKAPTVFEQRFPNINYGDAKGWAQRTFSSLYQYIPGVMNPHAKIVQNWNKFFVISCL 180
           +++ K  ++F+ +F ++ YGDAKGWA+R  +++  YIPGVMNPH K+VQ WNKFFV+SCL
Sbjct: 157 QRHAKTSSIFDSKFHSVLYGDAKGWARRFNNAINSYIPGVMNPHTKVVQEWNKFFVLSCL 216

Query: 181 FAVFLDPLFFFLLSVNKNDKCIV 249
            A+F+DPLFF LLSV + +KCIV
Sbjct: 217 GAIFIDPLFFILLSVKQEEKCIV 239


>ref|XP_002524633.1| Cyclic nucleotide-gated ion channel, putative [Ricinus communis]
           gi|223536102|gb|EEF37758.1| Cyclic nucleotide-gated ion
           channel, putative [Ricinus communis]
          Length = 778

 Score =  115 bits (287), Expect = 5e-24
 Identities = 51/83 (61%), Positives = 64/83 (77%)
 Frame = +1

Query: 1   RKNMKAPTVFEQRFPNINYGDAKGWAQRTFSSLYQYIPGVMNPHAKIVQNWNKFFVISCL 180
           +K++ A  +F+ +F N  YGDAKGWA R  S L +YIPGVMNPH K+VQ WNKF VI CL
Sbjct: 158 QKHLTASAIFDSKFHNALYGDAKGWATRFTSFLKRYIPGVMNPHTKVVQQWNKFCVICCL 217

Query: 181 FAVFLDPLFFFLLSVNKNDKCIV 249
            A+F+DPLFFF+LSV + +KCIV
Sbjct: 218 VAIFVDPLFFFMLSVQQENKCIV 240


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