BLASTX nr result

ID: Bupleurum21_contig00030725 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030725
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329713.1| predicted protein [Populus trichocarpa] gi|2...   124   1e-26
ref|XP_003634326.1| PREDICTED: probable cyclic nucleotide-gated ...   120   2e-25
ref|XP_002270141.2| PREDICTED: probable cyclic nucleotide-gated ...   118   4e-25
ref|XP_002329712.1| predicted protein [Populus trichocarpa] gi|2...   118   6e-25
emb|CBI35308.3| unnamed protein product [Vitis vinifera]              115   3e-24

>ref|XP_002329713.1| predicted protein [Populus trichocarpa] gi|222870621|gb|EEF07752.1|
           predicted protein [Populus trichocarpa]
          Length = 785

 Score =  124 bits (310), Expect = 1e-26
 Identities = 53/83 (63%), Positives = 70/83 (84%)
 Frame = +1

Query: 1   RKNMKAPNVFEQRFPNINYGDAKGWARRTFSSLYQYIPGVMNPHAKIVQKWNKFFVISCL 180
           +++ K  ++F+ +F ++ YGDAKGWARR  +++  YIPGVMNPHAK+VQKWNKFFVISCL
Sbjct: 157 QRHAKTSSIFDSKFHSVLYGDAKGWARRFNNAINSYIPGVMNPHAKVVQKWNKFFVISCL 216

Query: 181 FAVFLDPLFFFLLSVNKDDKCIV 249
            A+F+DPLFF LLSV +D+KCIV
Sbjct: 217 VAIFVDPLFFILLSVKQDEKCIV 239


>ref|XP_003634326.1| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
           chloroplastic-like [Vitis vinifera]
          Length = 783

 Score =  120 bits (300), Expect = 2e-25
 Identities = 51/82 (62%), Positives = 66/82 (80%)
 Frame = +1

Query: 4   KNMKAPNVFEQRFPNINYGDAKGWARRTFSSLYQYIPGVMNPHAKIVQKWNKFFVISCLF 183
           K + A  +F  +F N  YGDA+GWARR FSSL  Y+PG+MNPH K+VQ+WN+FFVISCL 
Sbjct: 164 KLLAAYAIFSSKFHNAFYGDARGWARRFFSSLQSYVPGIMNPHTKVVQQWNRFFVISCLL 223

Query: 184 AVFLDPLFFFLLSVNKDDKCIV 249
           A+F+DPLFF LLSV +++KCI+
Sbjct: 224 AIFVDPLFFLLLSVQQENKCII 245


>ref|XP_002270141.2| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
           chloroplastic-like [Vitis vinifera]
          Length = 779

 Score =  118 bits (296), Expect = 4e-25
 Identities = 50/82 (60%), Positives = 66/82 (80%)
 Frame = +1

Query: 4   KNMKAPNVFEQRFPNINYGDAKGWARRTFSSLYQYIPGVMNPHAKIVQKWNKFFVISCLF 183
           K+  A + F  +F +  YGDA+GWARR FSSL  Y+PG+MNPH K+VQ+WN+FFVISCL 
Sbjct: 158 KHCWASSYFSSKFHSAFYGDARGWARRFFSSLQSYVPGIMNPHTKVVQRWNRFFVISCLL 217

Query: 184 AVFLDPLFFFLLSVNKDDKCIV 249
           A+F+DPLFF LLSV +++KCI+
Sbjct: 218 AIFVDPLFFLLLSVQQENKCII 239


>ref|XP_002329712.1| predicted protein [Populus trichocarpa] gi|222870620|gb|EEF07751.1|
           predicted protein [Populus trichocarpa]
          Length = 781

 Score =  118 bits (295), Expect = 6e-25
 Identities = 49/83 (59%), Positives = 69/83 (83%)
 Frame = +1

Query: 1   RKNMKAPNVFEQRFPNINYGDAKGWARRTFSSLYQYIPGVMNPHAKIVQKWNKFFVISCL 180
           +++ K  ++F+ +F ++ YGDAKGWARR  +++  YIPGVMNPH K+VQ+WNKFFV+SCL
Sbjct: 157 QRHAKTSSIFDSKFHSVLYGDAKGWARRFNNAINSYIPGVMNPHTKVVQEWNKFFVLSCL 216

Query: 181 FAVFLDPLFFFLLSVNKDDKCIV 249
            A+F+DPLFF LLSV +++KCIV
Sbjct: 217 GAIFIDPLFFILLSVKQEEKCIV 239


>emb|CBI35308.3| unnamed protein product [Vitis vinifera]
          Length = 775

 Score =  115 bits (289), Expect = 3e-24
 Identities = 48/71 (67%), Positives = 61/71 (85%)
 Frame = +1

Query: 37  RFPNINYGDAKGWARRTFSSLYQYIPGVMNPHAKIVQKWNKFFVISCLFAVFLDPLFFFL 216
           +F N  YGDA+GWARR FSSL  Y+PG+MNPH K+VQ+WN+FFVISCL A+F+DPLFF L
Sbjct: 167 KFHNAFYGDARGWARRFFSSLQSYVPGIMNPHTKVVQQWNRFFVISCLLAIFVDPLFFLL 226

Query: 217 LSVNKDDKCIV 249
           LSV +++KCI+
Sbjct: 227 LSVQQENKCII 237


Top