BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030717
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39176.3| unnamed protein product [Vitis vinifera]              158   4e-37
ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containi...   158   4e-37
ref|XP_002519389.1| pentatricopeptide repeat-containing protein,...   150   1e-34
ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containi...   149   3e-34
ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [S...   149   3e-34

>emb|CBI39176.3| unnamed protein product [Vitis vinifera]
          Length = 996

 Score =  158 bits (400), Expect = 4e-37
 Identities = 78/128 (60%), Positives = 103/128 (80%)
 Frame = -3

Query: 397  IEGFSRDFITSLGLLSEMNGSESVPLVPLYGLMIDSFRKAGRLEVALELHKEISSSLVSS 218
            IEGF+R+FI SLGLL E+  + +VP++P Y ++IDSF KAGRLE+ALELHKE+SS    S
Sbjct: 853  IEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYS 912

Query: 217  YKQTNMFSSLIESLCSSNKFEKAFELYADMIRKGGVPEMSDFTNLIKGLIRLNKWEEALQ 38
                +++SSLIESL  ++K +KAFELYADMI++GG+PE+S F  L+KGLIR+N+WEEALQ
Sbjct: 913  AADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEALQ 972

Query: 37   LSHSLCYM 14
            LS  +C M
Sbjct: 973  LSDCICQM 980


>ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
            mitochondrial-like [Vitis vinifera]
          Length = 1045

 Score =  158 bits (400), Expect = 4e-37
 Identities = 78/128 (60%), Positives = 103/128 (80%)
 Frame = -3

Query: 397  IEGFSRDFITSLGLLSEMNGSESVPLVPLYGLMIDSFRKAGRLEVALELHKEISSSLVSS 218
            IEGF+R+FI SLGLL E+  + +VP++P Y ++IDSF KAGRLE+ALELHKE+SS    S
Sbjct: 853  IEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYS 912

Query: 217  YKQTNMFSSLIESLCSSNKFEKAFELYADMIRKGGVPEMSDFTNLIKGLIRLNKWEEALQ 38
                +++SSLIESL  ++K +KAFELYADMI++GG+PE+S F  L+KGLIR+N+WEEALQ
Sbjct: 913  AADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEALQ 972

Query: 37   LSHSLCYM 14
            LS  +C M
Sbjct: 973  LSDCICQM 980


>ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223541456|gb|EEF43006.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 634

 Score =  150 bits (378), Expect = 1e-34
 Identities = 78/132 (59%), Positives = 101/132 (76%)
 Frame = -3

Query: 397 IEGFSRDFITSLGLLSEMNGSESVPLVPLYGLMIDSFRKAGRLEVALELHKEISSSLVSS 218
           IEGFS +F+ SLGLL+E++   SVP++P+Y L+ID+F KAGRLE+ALELH+E+SS    S
Sbjct: 496 IEGFSHEFVASLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHEELSSF---S 552

Query: 217 YKQTNMFSSLIESLCSSNKFEKAFELYADMIRKGGVPEMSDFTNLIKGLIRLNKWEEALQ 38
               N + SLIESL  + K +KAF+LY+DM R+G VPE+S    LIKGL+R+ KWEEALQ
Sbjct: 553 AAYQNTYVSLIESLTLACKVDKAFKLYSDMTRRGFVPELSMLVCLIKGLLRVGKWEEALQ 612

Query: 37  LSHSLCYMDIVW 2
           LS S+C MDI W
Sbjct: 613 LSDSICQMDIHW 624


>ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
            mitochondrial-like [Brachypodium distachyon]
          Length = 966

 Score =  149 bits (375), Expect = 3e-34
 Identities = 73/135 (54%), Positives = 101/135 (74%), Gaps = 3/135 (2%)
 Frame = -3

Query: 397  IEGFSRDFITSLGLLSEMNGSESVPLVPLYGLMIDSFRKAGRLEVALELHKE---ISSSL 227
            ++GFS+ FI SLGLL EM   E+VP+ P+YG++IDSF KAGRLE ALELHKE   +SSSL
Sbjct: 825  VQGFSKKFIASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETALELHKELVEVSSSL 884

Query: 226  VSSYKQTNMFSSLIESLCSSNKFEKAFELYADMIRKGGVPEMSDFTNLIKGLIRLNKWEE 47
              +   T M++SLI++LC +++ E+AF LY +M RKG VP++  F +L+KGLI +NKW+E
Sbjct: 885  --NMTSTGMYASLIQALCLASQVEEAFTLYTEMTRKGIVPDLIVFVSLVKGLIEVNKWDE 942

Query: 46   ALQLSHSLCYMDIVW 2
            ALQL +  C+  + W
Sbjct: 943  ALQLCYGRCHEGVNW 957


>ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
            gi|241937886|gb|EES11031.1| hypothetical protein
            SORBIDRAFT_06g020845 [Sorghum bicolor]
          Length = 802

 Score =  149 bits (375), Expect = 3e-34
 Identities = 76/135 (56%), Positives = 104/135 (77%), Gaps = 3/135 (2%)
 Frame = -3

Query: 397  IEGFSRDFITSLGLLSEMNGSESVPLVPLYGLMIDSFRKAGRLEVALELHKE---ISSSL 227
            ++GFS+ FI SLGLL E+    +VP+ P+YGL+ID+F KAGRLE ALELHKE   +SSSL
Sbjct: 661  VQGFSKKFIASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSL 720

Query: 226  VSSYKQTNMFSSLIESLCSSNKFEKAFELYADMIRKGGVPEMSDFTNLIKGLIRLNKWEE 47
              + K  +M++SLI++LC +++ EKAFELY+++ RKG VPE+S F  LIKGLI++NKW E
Sbjct: 721  NITSK--DMYTSLIQALCLASQLEKAFELYSEITRKGVVPELSVFVCLIKGLIKVNKWNE 778

Query: 46   ALQLSHSLCYMDIVW 2
            ALQL +S+C   + W
Sbjct: 779  ALQLCYSICDEGVNW 793