BLASTX nr result

ID: Bupleurum21_contig00030698 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030698
         (488 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534769.1| PREDICTED: uncharacterized mitochondrial pro...   195   4e-48
emb|CBI29620.3| unnamed protein product [Vitis vinifera]              192   2e-47
ref|XP_002269047.1| PREDICTED: uncharacterized mitochondrial pro...   192   2e-47
ref|XP_003547325.1| PREDICTED: uncharacterized mitochondrial pro...   191   4e-47
ref|XP_002528785.1| RNA binding protein, putative [Ricinus commu...   187   8e-46

>ref|XP_003534769.1| PREDICTED: uncharacterized mitochondrial protein ymf11-like [Glycine
            max]
          Length = 707

 Score =  195 bits (495), Expect = 4e-48
 Identities = 97/149 (65%), Positives = 116/149 (77%), Gaps = 5/149 (3%)
 Frame = +2

Query: 2    LSRPIKEKKGQSPEYHNLLRMGLAESIDGLQYTRMSLVPETDYSPFPTGWRPDHEKALLE 181
            LSRP+KEKKGQSPEYHNLLRMGLAESIDGLQYTRMSLVPETDYS FP+ WRPDHEK LLE
Sbjct: 560  LSRPLKEKKGQSPEYHNLLRMGLAESIDGLQYTRMSLVPETDYSLFPSNWRPDHEKLLLE 619

Query: 182  YIRLDDPNTLEEQRRWLSEQGLISPQDYTSMLVWNYKRSAMPKLEQYSATEKQEEM---- 349
            YI+L+DP TLEEQR  + EQGL+SPQDY SMLVWNYKR+++P ++Q S     E +    
Sbjct: 620  YIKLEDPKTLEEQRDCIREQGLVSPQDYISMLVWNYKRNSLP-MDQLSLVRSNESVVGNQ 678

Query: 350  -LLESNDKSDDQISGNREDNGIRYHAAEM 433
             LL  +++ D   +   E+N  R +AA+M
Sbjct: 679  HLLVGSNQDDQDHTNQEEENDGRMNAAQM 707


>emb|CBI29620.3| unnamed protein product [Vitis vinifera]
          Length = 730

 Score =  192 bits (488), Expect = 2e-47
 Identities = 98/151 (64%), Positives = 116/151 (76%), Gaps = 7/151 (4%)
 Frame = +2

Query: 2    LSRPIKEKKGQSPEYHNLLRMGLAESIDGLQYTRMSLVPETDYSPFPTGWRPDHEKALLE 181
            LSRP+KEKKGQSPEYHNLLRMGL ESIDGL YTRMSLVPETDYSPFP+ WRPDHEKALLE
Sbjct: 581  LSRPLKEKKGQSPEYHNLLRMGLVESIDGLHYTRMSLVPETDYSPFPSNWRPDHEKALLE 640

Query: 182  YIRLDDPNTLEEQRRWLSEQGLISPQDYTSMLVWNYKRSAMPKLEQYSA-------TEKQ 340
            YI+LDD  TLEEQR  L E GL+SPQDY SMLVWNYKR+A+  ++Q S         ++ 
Sbjct: 641  YIKLDDSKTLEEQRSCLREHGLVSPQDYISMLVWNYKRNAI-IVDQLSVGKSGVSDAQRG 699

Query: 341  EEMLLESNDKSDDQISGNREDNGIRYHAAEM 433
            +E+LL S  ++ D  S + ED    +HAA++
Sbjct: 700  KELLLGSTHENYDHRSRDEEDKEEGFHAAQI 730


>ref|XP_002269047.1| PREDICTED: uncharacterized mitochondrial protein ymf11-like [Vitis
            vinifera]
          Length = 749

 Score =  192 bits (488), Expect = 2e-47
 Identities = 98/151 (64%), Positives = 116/151 (76%), Gaps = 7/151 (4%)
 Frame = +2

Query: 2    LSRPIKEKKGQSPEYHNLLRMGLAESIDGLQYTRMSLVPETDYSPFPTGWRPDHEKALLE 181
            LSRP+KEKKGQSPEYHNLLRMGL ESIDGL YTRMSLVPETDYSPFP+ WRPDHEKALLE
Sbjct: 600  LSRPLKEKKGQSPEYHNLLRMGLVESIDGLHYTRMSLVPETDYSPFPSNWRPDHEKALLE 659

Query: 182  YIRLDDPNTLEEQRRWLSEQGLISPQDYTSMLVWNYKRSAMPKLEQYSA-------TEKQ 340
            YI+LDD  TLEEQR  L E GL+SPQDY SMLVWNYKR+A+  ++Q S         ++ 
Sbjct: 660  YIKLDDSKTLEEQRSCLREHGLVSPQDYISMLVWNYKRNAI-IVDQLSVGKSGVSDAQRG 718

Query: 341  EEMLLESNDKSDDQISGNREDNGIRYHAAEM 433
            +E+LL S  ++ D  S + ED    +HAA++
Sbjct: 719  KELLLGSTHENYDHRSRDEEDKEEGFHAAQI 749


>ref|XP_003547325.1| PREDICTED: uncharacterized mitochondrial protein ymf11-like [Glycine
            max]
          Length = 711

 Score =  191 bits (486), Expect = 4e-47
 Identities = 96/150 (64%), Positives = 113/150 (75%), Gaps = 6/150 (4%)
 Frame = +2

Query: 2    LSRPIKEKKGQSPEYHNLLRMGLAESIDGLQYTRMSLVPETDYSPFPTGWRPDHEKALLE 181
            LSRP+KEKKGQSPEY NLLRMGLAESIDGLQYTRMSLVPETDYSPFP+ WRPDHEK LLE
Sbjct: 563  LSRPLKEKKGQSPEYQNLLRMGLAESIDGLQYTRMSLVPETDYSPFPSNWRPDHEKLLLE 622

Query: 182  YIRLDDPNTLEEQRRWLSEQGLISPQDYTSMLVWNYKRSAMPKLEQYSATEKQE------ 343
            YI+L+DP TLEEQR  + EQGL+SPQDY S LVWNYKR+++P ++Q S     E      
Sbjct: 623  YIKLEDPKTLEEQRDCIREQGLVSPQDYISRLVWNYKRNSLP-MDQLSLVRSNESVVGNQ 681

Query: 344  EMLLESNDKSDDQISGNREDNGIRYHAAEM 433
             +L+ SN    D  +   E++G    AA+M
Sbjct: 682  HLLVGSNQDDQDHTNKEEENDGRMNAAAQM 711


>ref|XP_002528785.1| RNA binding protein, putative [Ricinus communis]
            gi|223531788|gb|EEF33607.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 732

 Score =  187 bits (475), Expect = 8e-46
 Identities = 93/151 (61%), Positives = 116/151 (76%), Gaps = 7/151 (4%)
 Frame = +2

Query: 2    LSRPIKEKKGQSPEYHNLLRMGLAESIDGLQYTRMSLVPETDYSPFPTGWRPDHEKALLE 181
            LSRP+K+KKG SPEYHNLLRMGL ESIDGLQYTRMSLVPETDY+PFP+ WRP+HEKAL E
Sbjct: 583  LSRPLKDKKGSSPEYHNLLRMGLVESIDGLQYTRMSLVPETDYTPFPSNWRPNHEKALFE 642

Query: 182  YIRLDDPNTLEEQRRWLSEQGLISPQDYTSMLVWNYKRSAMPKLEQYSAT-------EKQ 340
            YI+LDDP TLEEQR  + EQGL SPQDY SMLVWNYKR+A+  ++Q +         E+ 
Sbjct: 643  YIKLDDPKTLEEQRYCIREQGLFSPQDYISMLVWNYKRNAI-AIDQITLVQSGDNNKERD 701

Query: 341  EEMLLESNDKSDDQISGNREDNGIRYHAAEM 433
             ++LL +N +++ Q S   E++   +H A+M
Sbjct: 702  RQLLLGTNHENNIQKSIEDEEHREGFHVAQM 732


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