BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030694
         (850 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...   334   2e-89
gb|AAK29467.1| polyprotein-like [Solanum chilense]                    327   3e-87
emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera]   263   5e-68
dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]           258   1e-66
emb|CAN65406.1| hypothetical protein VITISV_030853 [Vitis vinifera]   253   3e-65

>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
            1-94; Includes: RecName: Full=Protease; Includes:
            RecName: Full=Reverse transcriptase; Includes: RecName:
            Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
            protein product [Nicotiana tabacum]
          Length = 1328

 Score =  334 bits (856), Expect = 2e-89
 Identities = 169/299 (56%), Positives = 210/299 (70%), Gaps = 17/299 (5%)
 Frame = -3

Query: 848  LRSDNGGEYTSKEFQEYCARHGIRHERTVPGTPQQNGVAERMNRTITERVRCMLRMSKLP 669
            LRSDNGGEYTS+EF+EYC+ HGIRHE+TVPGTPQ NGVAERMNRTI E+VR MLRM+KLP
Sbjct: 547  LRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSMLRMAKLP 606

Query: 668  KSFWGEAVQTACYLINRSPSAPLEFEIPERIWLGKEISYSYLRVFGCKAFAHIPKEQRTK 489
            KSFWGEAVQTACYLINRSPS PL FEIPER+W  KE+SYS+L+VFGC+AFAH+PKEQRTK
Sbjct: 607  KSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAFAHVPKEQRTK 666

Query: 488  LDDKATPCIFVGYGDTEFGYRLWNPEQKKLFRSRDVIFHESQ------NYENFEKGAQQH 327
            LDDK+ PCIF+GYGD EFGYRLW+P +KK+ RSRDV+F ES+        E  + G   +
Sbjct: 667  LDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFRESEVRTAADMSEKVKNGIIPN 726

Query: 326  QARNPDQTQD--GGEESPTEIGDDG-QGAEDAERGEQ--------PHQSEDENXXXXXXX 180
                P  + +    E +  E+ + G Q  E  E+GEQ         H ++ E        
Sbjct: 727  FVTIPSTSNNPTSAESTTDEVSEQGEQPGEVIEQGEQLDEGVEEVEHPTQGEEQHQPLRR 786

Query: 179  XXXXXXXXXXXXXXEYILIADEGEPETYEEVKTHKDSSCWLKAMQEEMDSLEKNQTYEL 3
                          EY+LI+D+ EPE+ +EV +H + +  +KAMQEEM+SL+KN TY+L
Sbjct: 787  SERPRVESRRYPSTEYVLISDDREPESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKL 845


>gb|AAK29467.1| polyprotein-like [Solanum chilense]
          Length = 1328

 Score =  327 bits (837), Expect = 3e-87
 Identities = 168/303 (55%), Positives = 210/303 (69%), Gaps = 21/303 (6%)
 Frame = -3

Query: 848  LRSDNGGEYTSKEFQEYCARHGIRHERTVPGTPQQNGVAERMNRTITERVRCMLRMSKLP 669
            LR+DNGGEYTS+EF+EYC+ HGIRHE+TVPGTPQ NGVAERMNRTI E+VR MLRM+KLP
Sbjct: 548  LRTDNGGEYTSREFEEYCSNHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSMLRMAKLP 607

Query: 668  KSFWGEAVQTACYLINRSPSAPLEFEIPERIWLGKEISYSYLRVFGCKAFAHIPKEQRTK 489
            K+FWGEAV+TACYLINRSPS PLEF+IPER+W  KE+SYS+L+VFGCKAFAH+PKEQRTK
Sbjct: 608  KTFWGEAVRTACYLINRSPSVPLEFDIPERVWTNKEMSYSHLKVFGCKAFAHVPKEQRTK 667

Query: 488  LDDKATPCIFVGYGDTEFGYRLWNPEQKKLFRSRDVIFHESQ---NYENFEKGAQQH--- 327
            LDDK+ PCIF+GYGD EFGYRLW+  +KK+ RSRDVIF ES+     +  EK  +++   
Sbjct: 668  LDDKSVPCIFIGYGDEEFGYRLWDLVKKKVIRSRDVIFRESEVGTAADLSEKAKKKNGII 727

Query: 326  --------QARNPDQTQD------GGEESPTEIGDDG-QGAEDAERGEQPHQSEDENXXX 192
                     + +P   +         EE P EI + G Q  ++ E+ E P + + +    
Sbjct: 728  PNLVTIPSSSNHPTSAESTIDEVVEQEEQPDEIVEQGEQLGDNTEQMEYPEEEQSQ---- 783

Query: 191  XXXXXXXXXXXXXXXXXXEYILIADEGEPETYEEVKTHKDSSCWLKAMQEEMDSLEKNQT 12
                              EY+LI  EGEPE  +EV +H + S W+KAM EEM SL+KN T
Sbjct: 784  PLRRSERQRVESTKYPSSEYVLIKYEGEPENLKEVLSHPEKSQWMKAMHEEMGSLQKNGT 843

Query: 11   YEL 3
            Y+L
Sbjct: 844  YQL 846


>emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera]
          Length = 1207

 Score =  263 bits (671), Expect = 5e-68
 Identities = 136/318 (42%), Positives = 186/318 (58%), Gaps = 36/318 (11%)
 Frame = -3

Query: 848  LRSDNGGEYTSKEFQEYCARHGIRHERTVPGTPQQNGVAERMNRTITERVRCMLRMSKLP 669
            +R+DNGGEY+S  F EYC +HGIRH++T P TPQ NG+AERMNRT+ ERVRC+L  S+LP
Sbjct: 428  IRTDNGGEYSSP-FDEYCRQHGIRHQKTSPKTPQLNGLAERMNRTLVERVRCLLSQSQLP 486

Query: 668  KSFWGEAVQTACYLINRSPSAPLEFEIPERIWLGKEISYSYLRVFGCKAFAHIPKEQRTK 489
            +SFWGEA+ T  +++N +P  PLEF++P+RIW   EISY +LRVFGCKAF HIPK++R+K
Sbjct: 487  RSFWGEALNTVVHVLNLTPCVPLEFDVPDRIWSKNEISYDHLRVFGCKAFVHIPKDERSK 546

Query: 488  LDDKATPCIFVGYGDTEFGYRLWNPEQKKLFRSRDVIFHESQNYENFEK----------- 342
            LD K  PC+F+GYG  E GYR ++P QKKL RSRDV+F E    ++ EK           
Sbjct: 547  LDAKTRPCVFIGYGQDELGYRFYDPVQKKLVRSRDVVFMEDHTIQDIEKTNPMESQHSGD 606

Query: 341  ------------GAQQHQARNPDQTQDGGEESPTEIGDDGQGAE-DAERGEQPHQSEDEN 201
                          Q     + DQ   G  E+PT++ D+    + D    E P Q E ++
Sbjct: 607  LIDLDPAPLTNLPTQVEDEAHDDQHDMGDVETPTQVEDEAHDDQHDMGDVETPTQVEVDD 666

Query: 200  ------------XXXXXXXXXXXXXXXXXXXXXEYILIADEGEPETYEEVKTHKDSSCWL 57
                                             +Y+L+ D GEPE+Y E    ++   W+
Sbjct: 667  DVHEQSPAAEAPSDIPLRRSTRDRHPSTRYSVDDYVLLIDGGEPESYVEAMEDENKMKWV 726

Query: 56   KAMQEEMDSLEKNQTYEL 3
             AMQ+EM+SL +N ++EL
Sbjct: 727  DAMQDEMESLHENHSFEL 744


>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
          Length = 1338

 Score =  258 bits (659), Expect = 1e-66
 Identities = 133/305 (43%), Positives = 185/305 (60%), Gaps = 23/305 (7%)
 Frame = -3

Query: 848  LRSDNGGEYTSKEFQEYCARHGIRHERTVPGTPQQNGVAERMNRTITERVRCMLRMSKLP 669
            +R+DNGGEY   +F  YC  HGIRH+ T P TPQ NG+AERMNRT+ ER RC+L  SKLP
Sbjct: 545  IRTDNGGEYQG-QFDAYCKEHGIRHQFTPPKTPQLNGLAERMNRTLIERTRCLLSHSKLP 603

Query: 668  KSFWGEAVQTACYLINRSPSAPLEFEIPERIWLGKEISYSYLRVFGCKAFAHIPKEQRTK 489
            K+FWGEA+ TA Y++N SP  PL+++ PE+IWLG++ISY  LRVFGCKA+ H+PK++R+K
Sbjct: 604  KAFWGEALVTAAYVLNHSPCVPLQYKAPEKIWLGRDISYDQLRVFGCKAYVHVPKDERSK 663

Query: 488  LDDKATPCIFVGYGDTEFGYRLWNPEQKKLFRSRDVIFHESQNYENFEKGAQQHQ----- 324
            LD K   C+F+GYG    GY+ ++P +KKL RSRDV+F E Q  E+ +K  +        
Sbjct: 664  LDVKTRECVFIGYGQDMLGYKFYDPVEKKLVRSRDVVFVEDQTIEDIDKVEKSTDDSAEF 723

Query: 323  --------ARNPDQTQDGGEESP----------TEIGDDGQGAEDAERGEQPHQSEDENX 198
                     +  D  QD   E+P          TE G++  G +DA+  +QP Q    N 
Sbjct: 724  ELPPTVVPRQVGDDVQDNQPEAPGLPNEDELADTE-GNEDNGDDDADEEDQP-QPPILNN 781

Query: 197  XXXXXXXXXXXXXXXXXXXXEYILIADEGEPETYEEVKTHKDSSCWLKAMQEEMDSLEKN 18
                                EY+L+ D GEP+++EE    +    W++AMQ+E+ SL +N
Sbjct: 782  PPYHTRSGRVVQQSTRYSPHEYVLLTDGGEPDSFEEAIDDEHKEKWIEAMQDEIKSLHEN 841

Query: 17   QTYEL 3
            +T+EL
Sbjct: 842  KTFEL 846


>emb|CAN65406.1| hypothetical protein VITISV_030853 [Vitis vinifera]
          Length = 1017

 Score =  253 bits (647), Expect = 3e-65
 Identities = 129/305 (42%), Positives = 176/305 (57%), Gaps = 23/305 (7%)
 Frame = -3

Query: 848  LRSDNGGEYTSKEFQEYCARHGIRHERTVPGTPQQNGVAERMNRTITERVRCMLRMSKLP 669
            ++ DNGGEY+S  F EYC +HGIRH++T P TPQ NG+AE MNRT+ ERVRC+L  S+LP
Sbjct: 299  IQIDNGGEYSSP-FDEYCRQHGIRHQKTPPKTPQLNGLAESMNRTLVERVRCLLSQSQLP 357

Query: 668  KSFWGEAVQTACYLINRSPSAPLEFEIPERIWLGKEISYSYLRVFGCKAFAHIPKEQRTK 489
            +SFWGEA+ T  +L+N +P  PLEF++P+RIW   EI Y +LRVFGCKAF HIPK++ +K
Sbjct: 358  RSFWGEALNTVVHLLNLTPCVPLEFDVPDRIWSNNEICYDHLRVFGCKAFVHIPKDEISK 417

Query: 488  LDDKATPCIFVGYGDTEFGYRLWNPEQKKLFRSRDVIFHESQNYENFEKG---------- 339
            LD K  PC+F+GYG  E GYR ++P QKKL RSRDV+F E    ++ EK           
Sbjct: 418  LDAKTRPCVFIGYGHDELGYRFYDPMQKKLVRSRDVVFMEDHTIQDIEKTNPMESQHSGD 477

Query: 338  -------------AQQHQARNPDQTQDGGEESPTEIGDDGQGAEDAERGEQPHQSEDENX 198
                          Q     + DQ   G  E+PT++  D    E +   E P        
Sbjct: 478  LIDLDLAPLTNFPTQVEDEAHDDQHDMGDVETPTQVEVDDDVHEQSPTAEAP-------L 530

Query: 197  XXXXXXXXXXXXXXXXXXXXEYILIADEGEPETYEEVKTHKDSSCWLKAMQEEMDSLEKN 18
                                +Y+L+ D GEPE+Y E    ++   W+ A+Q EM+SL +N
Sbjct: 531  DIPLRRSTRDRHLSTRYSVDDYVLLTDGGEPESYVEAMEDENKMKWVDAIQNEMESLHEN 590

Query: 17   QTYEL 3
             +++L
Sbjct: 591  HSFKL 595