BLASTX nr result

ID: Bupleurum21_contig00030692 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030692
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAG66036.1| RNA polymerase I largest subunit [Calibrachoa hy...    64   1e-08
dbj|BAG66034.1| RNA polymerase I largest subunit [Petunia integr...    64   2e-08
dbj|BAG66032.1| RNA polymerase I largest subunit [Petunia integr...    64   2e-08
dbj|BAG66026.1| RNA polymerase I largest subunit [Petunia axilla...    64   2e-08
dbj|BAG66028.1| RNA polymerase I largest subunit [Petunia axilla...    63   2e-08

>dbj|BAG66036.1| RNA polymerase I largest subunit [Calibrachoa hybrid cultivar]
          Length = 254

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 34/78 (43%), Positives = 47/78 (60%)
 Frame = +1

Query: 37  VTVADITERVEICEIPLSXXXXXXXXXXXXXXXXXXQEVVSEEDCQETLETMFLRELEDA 216
           +TVAD+ E +E+  +PLS                   E VS EDC+ TL+ +FLRELEDA
Sbjct: 14  ITVADMIESMEVNLLPLSIYNHAISQVYKLTVKLKRHEFVSPEDCEYTLKYVFLRELEDA 73

Query: 217 IEKHVKSSSRISGIEEFK 270
           IE H+   S+I+GI++FK
Sbjct: 74  IESHLALLSKINGIKDFK 91


>dbj|BAG66034.1| RNA polymerase I largest subunit [Petunia integrifolia]
           gi|194578654|dbj|BAG66035.1| RNA polymerase I largest
           subunit [Petunia integrifolia]
          Length = 259

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 34/78 (43%), Positives = 46/78 (58%)
 Frame = +1

Query: 37  VTVADITERVEICEIPLSXXXXXXXXXXXXXXXXXXQEVVSEEDCQETLETMFLRELEDA 216
           +TVAD+ E +E+  +PLS                   E VS EDC  TL+ +FLRELEDA
Sbjct: 14  ITVADMIESMEVNLLPLSIYNHAISQVYKLTVKLKRHEFVSPEDCHYTLKYVFLRELEDA 73

Query: 217 IEKHVKSSSRISGIEEFK 270
           IE H+   S+I+GI++FK
Sbjct: 74  IESHLALLSKINGIKDFK 91


>dbj|BAG66032.1| RNA polymerase I largest subunit [Petunia integrifolia subsp.
           inflata] gi|194578650|dbj|BAG66033.1| RNA polymerase I
           largest subunit [Petunia integrifolia subsp. inflata]
          Length = 259

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 34/78 (43%), Positives = 46/78 (58%)
 Frame = +1

Query: 37  VTVADITERVEICEIPLSXXXXXXXXXXXXXXXXXXQEVVSEEDCQETLETMFLRELEDA 216
           +TVAD+ E +E+  +PLS                   E VS EDC  TL+ +FLRELEDA
Sbjct: 14  ITVADMIESMEVNLLPLSIYNHAISQVYKLTVKLKRHEFVSPEDCHYTLKYVFLRELEDA 73

Query: 217 IEKHVKSSSRISGIEEFK 270
           IE H+   S+I+GI++FK
Sbjct: 74  IESHLALLSKINGIKDFK 91


>dbj|BAG66026.1| RNA polymerase I largest subunit [Petunia axillaris subsp.
           axillaris] gi|194578638|dbj|BAG66027.1| RNA polymerase I
           largest subunit [Petunia axillaris subsp. axillaris]
           gi|194578644|dbj|BAG66030.1| RNA polymerase I largest
           subunit [Petunia axillaris subsp. parodii]
           gi|194578646|dbj|BAG66031.1| RNA polymerase I largest
           subunit [Petunia axillaris subsp. parodii]
          Length = 260

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 34/78 (43%), Positives = 46/78 (58%)
 Frame = +1

Query: 37  VTVADITERVEICEIPLSXXXXXXXXXXXXXXXXXXQEVVSEEDCQETLETMFLRELEDA 216
           +TVAD+ E +E+  +PLS                   E VS EDC  TL+ +FLRELEDA
Sbjct: 14  ITVADMIESMEVNLLPLSIYNHAISQVYKLTVKLKRHEFVSPEDCHYTLKYVFLRELEDA 73

Query: 217 IEKHVKSSSRISGIEEFK 270
           IE H+   S+I+GI++FK
Sbjct: 74  IESHLALLSKINGIKDFK 91


>dbj|BAG66028.1| RNA polymerase I largest subunit [Petunia axillaris subsp.
           subandina] gi|194578642|dbj|BAG66029.1| RNA polymerase I
           largest subunit [Petunia axillaris subsp. subandina]
          Length = 260

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 33/78 (42%), Positives = 46/78 (58%)
 Frame = +1

Query: 37  VTVADITERVEICEIPLSXXXXXXXXXXXXXXXXXXQEVVSEEDCQETLETMFLRELEDA 216
           +T+AD+ E +E+  +PLS                   E VS EDC  TL+ +FLRELEDA
Sbjct: 14  ITIADMIESMEVNLLPLSIYNHAISQVYKLTVKLKRHEFVSPEDCHYTLKYVFLRELEDA 73

Query: 217 IEKHVKSSSRISGIEEFK 270
           IE H+   S+I+GI++FK
Sbjct: 74  IESHLALLSKINGIKDFK 91


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