BLASTX nr result

ID: Bupleurum21_contig00030689 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030689
         (645 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299084.1| predicted protein [Populus trichocarpa] gi|2...    73   2e-16
ref|XP_004151750.1| PREDICTED: uncharacterized protein LOC101220...    89   9e-16
ref|XP_004154388.1| PREDICTED: uncharacterized protein LOC101221...    79   6e-13
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    75   1e-11
ref|XP_002331606.1| predicted protein [Populus trichocarpa] gi|2...    75   1e-11

>ref|XP_002299084.1| predicted protein [Populus trichocarpa] gi|222846342|gb|EEE83889.1|
           predicted protein [Populus trichocarpa]
          Length = 949

 Score = 72.8 bits (177), Expect(2) = 2e-16
 Identities = 44/155 (28%), Positives = 72/155 (46%), Gaps = 5/155 (3%)
 Frame = -3

Query: 451 SMGLCHVSQKSVKQFIFRFASDAQMNTILAKGTWYFDKRPMLLSAWGG--TAQTGAIKTI 278
           S GL +V   +    +FRF ++A+M+ +L KG W F  + ++L  W          I  +
Sbjct: 424 SYGLENVMTTANGFMVFRFKTEAEMHVVLEKGPWMFGGKAIILQQWHPHFVFDKNKISKL 483

Query: 277 PLWLKLSHIPVYYWTREGLSFLASAVGRPLCADLLTSELNPLPFAKMCVNYNLGDPLPDS 98
           P+W++L  +P   W++ GLS  AS  G+PL  D  T     L +A +CV  +   P    
Sbjct: 484 PVWIRLHGLPFPLWSKSGLSLAASMAGKPLSCDEQTYNCTHLDYAIVCVEIDASLPFIHQ 543

Query: 97  VTVASIDPCTGEKATTEVL---ISYPQKPLYCSGC 2
             + S       K + E++   + Y  +P  C  C
Sbjct: 544 FDMES-------KLSDELVLIRVEYEWRPPRCEKC 571



 Score = 38.5 bits (88), Expect(2) = 2e-16
 Identities = 16/42 (38%), Positives = 25/42 (59%)
 Frame = -2

Query: 569 PDEVLRKGIDKFKRCIIGTFTKGSLPFSKVSDMAQSSWGFYG 444
           P+E+L +  +K+ RC+IG F    +PF  V+ +A   W  YG
Sbjct: 385 PEEILTETTEKWTRCMIGFFPGFKMPFHVVNTIASRVWASYG 426



 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 40/124 (32%), Positives = 60/124 (48%), Gaps = 4/124 (3%)
 Frame = -3

Query: 361 KGTWYFDKRPMLLSAW--GGTAQTGAIKTIPLWLKLSHIPVYYWTREGLSFLASAVGRPL 188
           +  W F  + ++L  W  G       I  IP+W+++  +P   WT+EGLS +AS VG+PL
Sbjct: 5   RSPWMFGGKAIILQKWHSGFVFDMNMITKIPVWIRIYDLPFPLWTKEGLSEVASMVGQPL 64

Query: 187 CADLLTSELNPLPFAKMCVNYNLGDPLPDSVTVASIDPCTGEKATT--EVLISYPQKPLY 14
             D LT     L +A++CV  +   P      +        E +TT  EV ++Y  KP  
Sbjct: 65  SCDELTLGCKRLDYARLCVEVDASLPFVHKFKL--------EFSTTIREVHVNYEWKPKR 116

Query: 13  CSGC 2
           C  C
Sbjct: 117 CERC 120


>ref|XP_004151750.1| PREDICTED: uncharacterized protein LOC101220238, partial [Cucumis
           sativus]
          Length = 169

 Score = 88.6 bits (218), Expect = 9e-16
 Identities = 49/136 (36%), Positives = 74/136 (54%), Gaps = 2/136 (1%)
 Frame = -3

Query: 403 FRFASDAQMNTILAKGTWYFDKRPMLLSAW--GGTAQTGAIKTIPLWLKLSHIPVYYWTR 230
           F+F     +  IL++G W+   +PMLL  W  G   +T    ++P+W+KL  IP+  WT 
Sbjct: 8   FQFKCLNSIEWILSRGPWHLGGKPMLLRKWTPGIVPETFVFDSVPVWIKLGRIPLELWTD 67

Query: 229 EGLSFLASAVGRPLCADLLTSELNPLPFAKMCVNYNLGDPLPDSVTVASIDPCTGEKATT 50
            GL  +ASA+G+PL  DL T E   L +A++CV  N+   +P  +TV       GE+   
Sbjct: 68  AGLVVVASAIGKPLSVDLATKERCRLSYARICVELNVDSTMPIEITV----NLRGEEFI- 122

Query: 49  EVLISYPQKPLYCSGC 2
            V ++Y  KP  C+ C
Sbjct: 123 -VPVTYEWKPRKCNLC 137


>ref|XP_004154388.1| PREDICTED: uncharacterized protein LOC101221036 [Cucumis sativus]
          Length = 431

 Score = 79.3 bits (194), Expect = 6e-13
 Identities = 39/107 (36%), Positives = 61/107 (57%), Gaps = 2/107 (1%)
 Frame = -3

Query: 403 FRFASDAQMNTILAKGTWYFDKRPMLLSAW--GGTAQTGAIKTIPLWLKLSHIPVYYWTR 230
           F+F     +  IL++G W+   +PMLL  W  G   ++    ++ +W+KL  IP+  WT 
Sbjct: 8   FQFKHLKLIEWILSRGPWHLGGKPMLLRKWTPGIVPESFVFDSVLVWIKLGRIPLELWTD 67

Query: 229 EGLSFLASAVGRPLCADLLTSELNPLPFAKMCVNYNLGDPLPDSVTV 89
             L+ +ASA+G+PL  DL T E   L +A++CV  N+   +P  VTV
Sbjct: 68  ASLAVVASAIGKPLSVDLATKERRHLSYARICVELNVDSIMPAEVTV 114


>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
           predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 75.1 bits (183), Expect = 1e-11
 Identities = 48/152 (31%), Positives = 68/152 (44%), Gaps = 2/152 (1%)
 Frame = -3

Query: 451 SMGLCHVSQKSVKQFIFRFASDAQMNTILAKGTWYFDKRPMLLSAWGGTAQ--TGAIKTI 278
           S GL  V       FIF F S      +L +  W+   RP++L  W    Q     +  +
Sbjct: 181 SYGLSEVLSSDNGFFIFNFDSVDHATNVLERAPWHMANRPLVLKRWQPNMQFLKDDLARV 240

Query: 277 PLWLKLSHIPVYYWTREGLSFLASAVGRPLCADLLTSELNPLPFAKMCVNYNLGDPLPDS 98
           P+W++L ++P+ YWT +GLS +ASAVG PL AD  T     L +A++CV  +    L   
Sbjct: 241 PVWVRLYNVPLEYWTIKGLSCVASAVGVPLHADHTTLLRKRLSYARVCVEIDASKTL--- 297

Query: 97  VTVASIDPCTGEKATTEVLISYPQKPLYCSGC 2
             V   D          +   Y   P  CS C
Sbjct: 298 --VKEYDLRCPNGLFITISAEYEWIPSKCSNC 327


>ref|XP_002331606.1| predicted protein [Populus trichocarpa] gi|222874002|gb|EEF11133.1|
           predicted protein [Populus trichocarpa]
          Length = 302

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 41/122 (33%), Positives = 65/122 (53%), Gaps = 3/122 (2%)
 Frame = -3

Query: 445 GLCHVSQKSVKQFIFRFASDAQMNTILAKGTWYFD-KRPMLLSAWGG--TAQTGAIKTIP 275
           G   V  K    F+  F S       L +G  ++D  +P +L  W    + +   +K+ P
Sbjct: 67  GNVKVYSKGSGVFVLDFESAHGKELALGEGPRFYDGSKPFILKPWSRDLSLEIKELKSAP 126

Query: 274 LWLKLSHIPVYYWTREGLSFLASAVGRPLCADLLTSELNPLPFAKMCVNYNLGDPLPDSV 95
           +W+KL ++ ++ W+ E L  +AS VGRPL AD +T+    L FA++CV  +    LPDSV
Sbjct: 127 IWIKLPNLRLHLWSPEALGKIASLVGRPLFADTVTASRETLCFARVCVEVDFDKMLPDSV 186

Query: 94  TV 89
           T+
Sbjct: 187 TI 188


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