BLASTX nr result

ID: Bupleurum21_contig00030687 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030687
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN75979.1| hypothetical protein VITISV_012183 [Vitis vinifera]   108   5e-22
ref|XP_002277898.1| PREDICTED: uncharacterized protein LOC100254...   106   2e-21
ref|XP_002312520.1| predicted protein [Populus trichocarpa] gi|2...   105   5e-21
ref|XP_002314712.1| predicted protein [Populus trichocarpa] gi|2...   104   7e-21
ref|XP_002517209.1| conserved hypothetical protein [Ricinus comm...   104   9e-21

>emb|CAN75979.1| hypothetical protein VITISV_012183 [Vitis vinifera]
          Length = 301

 Score =  108 bits (270), Expect = 5e-22
 Identities = 65/118 (55%), Positives = 80/118 (67%), Gaps = 8/118 (6%)
 Frame = -2

Query: 337 MVSLEKPQTDSPSVDLNSSPRVSFSSDFLDETNFIP----SIKTCQVEKEQEKPREKTFE 170
           MVSLE  Q  S S++   SPR+SFSSDFLDE NFI     S K  Q E +QEK R   FE
Sbjct: 1   MVSLEAVQASSRSIEPTVSPRISFSSDFLDEKNFISISPNSEKEKQHEMDQEKARNTDFE 60

Query: 169 FLSSNS--QTMLSADELFFEGKLLPYWQMHH--EIKKISLRSEEGPKAKAKVEGSNKE 8
           FLSSNS   TML+ADELFFEGKLLP+WQ  H  ++ K+SL+++   + +   EG+NKE
Sbjct: 61  FLSSNSTSHTMLTADELFFEGKLLPFWQRQHSEKLNKMSLKTKNDEEQEE--EGANKE 116


>ref|XP_002277898.1| PREDICTED: uncharacterized protein LOC100254485 [Vitis vinifera]
          Length = 235

 Score =  106 bits (265), Expect = 2e-21
 Identities = 64/120 (53%), Positives = 81/120 (67%), Gaps = 8/120 (6%)
 Frame = -2

Query: 337 MVSLEKPQTDSPSVDLNSSPRVSFSSDFLDETNFIP----SIKTCQVEKEQEKPREKTFE 170
           MVSLE  Q  S S++   SPR+SFSSDFLDE NFI     S K  Q E +QEK R   FE
Sbjct: 1   MVSLEAVQASSRSIEPTVSPRISFSSDFLDEKNFISISPNSEKEKQHEMDQEKARNTDFE 60

Query: 169 FLSSNS--QTMLSADELFFEGKLLPYWQMHH--EIKKISLRSEEGPKAKAKVEGSNKESR 2
           FLSSNS   TML+ADELFFEGKLLP+WQ  H  ++ K+SL+++   + + + E + +ESR
Sbjct: 61  FLSSNSTSHTMLTADELFFEGKLLPFWQRQHSEKLNKMSLKTKNDEEQEEE-EANKEESR 119


>ref|XP_002312520.1| predicted protein [Populus trichocarpa] gi|222852340|gb|EEE89887.1|
           predicted protein [Populus trichocarpa]
          Length = 233

 Score =  105 bits (261), Expect = 5e-21
 Identities = 61/120 (50%), Positives = 84/120 (70%), Gaps = 8/120 (6%)
 Frame = -2

Query: 337 MVSLEKPQTDSPSVDLNSSPRVSFSSDFLDETNFIPSIKTCQVEKEQEKPREKT----FE 170
           MVSLE  Q  S S+D  SSPR+SFS++FLD+ NFI    + Q EK++E  RE+     FE
Sbjct: 1   MVSLETVQATSRSIDQASSPRISFSAEFLDDKNFISISPSPQAEKDKETERERARNAEFE 60

Query: 169 FLSS--NSQTMLSADELFFEGKLLPYWQMHH--EIKKISLRSEEGPKAKAKVEGSNKESR 2
           FLSS  +SQTML+ADELF+EG+LLP+WQM H  ++ K+SL+++    A+ + E S +E R
Sbjct: 61  FLSSKMSSQTMLTADELFYEGRLLPFWQMQHSEKLNKVSLKTK---NAEEEEEVSKEEPR 117


>ref|XP_002314712.1| predicted protein [Populus trichocarpa] gi|222863752|gb|EEF00883.1|
           predicted protein [Populus trichocarpa]
          Length = 235

 Score =  104 bits (260), Expect = 7e-21
 Identities = 63/120 (52%), Positives = 83/120 (69%), Gaps = 8/120 (6%)
 Frame = -2

Query: 337 MVSLEKPQTDSPSVDLNSSPRVSFSSDFLDETNFIPSIKTCQVEKEQEKPREKT----FE 170
           M+SLE  Q  S S++  SSPR+SFS+DFL + NFIP     Q EK+ E  REK     FE
Sbjct: 1   MISLETVQATSRSIE-PSSPRISFSADFLHDKNFIPISPNQQAEKDGEAEREKARNAEFE 59

Query: 169 FLSS--NSQTMLSADELFFEGKLLPYWQMHH--EIKKISLRSEEGPKAKAKVEGSNKESR 2
           FLSS  +SQTML+ADELFFEG+LLP+WQM H  ++ KISL+++E  + + + E S +E R
Sbjct: 60  FLSSKMSSQTMLTADELFFEGRLLPFWQMQHSEKLNKISLKTKEAEEGEGE-EMSKEEPR 118


>ref|XP_002517209.1| conserved hypothetical protein [Ricinus communis]
           gi|223543844|gb|EEF45372.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 245

 Score =  104 bits (259), Expect = 9e-21
 Identities = 63/124 (50%), Positives = 81/124 (65%), Gaps = 14/124 (11%)
 Frame = -2

Query: 337 MVSLEKPQTDSPSVDLNSSPRVSFSSDFLDETNFIPSIKTCQVEKEQEKPREKT------ 176
           MVSLE  Q  S S+D  SSPR+SFS++FLDE NFI      + E++QE  REK       
Sbjct: 1   MVSLEAVQATSRSIDQPSSPRISFSAEFLDENNFISINPNARAERDQEMEREKARNYAAD 60

Query: 175 FEFLSSNS-----QTMLSADELFFEGKLLPYWQMH--HEIKKISLRSEEGPKA-KAKVEG 20
           FEFLS NS      TML+ADELFFEGKLLP+WQM    ++ KI+L+ +E  +  + +VE 
Sbjct: 61  FEFLSGNSTMSSHATMLTADELFFEGKLLPFWQMQQSEKLHKINLKCKETEEGEEEEVEV 120

Query: 19  SNKE 8
           +NKE
Sbjct: 121 NNKE 124


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