BLASTX nr result

ID: Bupleurum21_contig00030655 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030655
         (470 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279399.2| PREDICTED: pentatricopeptide repeat-containi...   244   7e-63
emb|CBI26594.3| unnamed protein product [Vitis vinifera]              244   7e-63
emb|CAN64701.1| hypothetical protein VITISV_037299 [Vitis vinifera]   244   7e-63
ref|XP_002307578.1| predicted protein [Populus trichocarpa] gi|2...   243   9e-63
gb|AAL32523.1| Unknown protein [Arabidopsis thaliana] gi|2731191...   234   4e-60

>ref|XP_002279399.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
           mitochondrial-like [Vitis vinifera]
          Length = 642

 Score =  244 bits (622), Expect = 7e-63
 Identities = 115/156 (73%), Positives = 136/156 (87%)
 Frame = -1

Query: 470 IRKWKEEGHVIRKYEINRNVRLLRKMKRYKHALEICEWMRTQEDMMLVEGDYAVHLDLIS 291
           I++W+EEGH +RKYE+NR VR LRK+KRYKHALEICEWM  Q D+ L+ GDYAVHLDLI+
Sbjct: 189 IQRWREEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTKQHDIKLLAGDYAVHLDLIA 248

Query: 290 KVRGLNSAEKFFEDLPDKMKGQLACSALLHNYVQHKETSKAEALMEKMLECGFHKNPLPY 111
           K+RGL SAEKFFEDL DKMKGQ  C+ALLH YVQ+K + KAEALMEKM ECGF K PLPY
Sbjct: 249 KIRGLASAEKFFEDLSDKMKGQPTCTALLHTYVQNKVSEKAEALMEKMSECGFLKCPLPY 308

Query: 110 NHMISLYISNGQLKEAVGLIKKLKKNTAPDVLTYNL 3
           NHMISLYIS+GQL++  G+I++LKKNT+PDV+TYNL
Sbjct: 309 NHMISLYISDGQLEKVPGMIQELKKNTSPDVVTYNL 344


>emb|CBI26594.3| unnamed protein product [Vitis vinifera]
          Length = 529

 Score =  244 bits (622), Expect = 7e-63
 Identities = 115/156 (73%), Positives = 136/156 (87%)
 Frame = -1

Query: 470 IRKWKEEGHVIRKYEINRNVRLLRKMKRYKHALEICEWMRTQEDMMLVEGDYAVHLDLIS 291
           I++W+EEGH +RKYE+NR VR LRK+KRYKHALEICEWM  Q D+ L+ GDYAVHLDLI+
Sbjct: 76  IQRWREEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTKQHDIKLLAGDYAVHLDLIA 135

Query: 290 KVRGLNSAEKFFEDLPDKMKGQLACSALLHNYVQHKETSKAEALMEKMLECGFHKNPLPY 111
           K+RGL SAEKFFEDL DKMKGQ  C+ALLH YVQ+K + KAEALMEKM ECGF K PLPY
Sbjct: 136 KIRGLASAEKFFEDLSDKMKGQPTCTALLHTYVQNKVSEKAEALMEKMSECGFLKCPLPY 195

Query: 110 NHMISLYISNGQLKEAVGLIKKLKKNTAPDVLTYNL 3
           NHMISLYIS+GQL++  G+I++LKKNT+PDV+TYNL
Sbjct: 196 NHMISLYISDGQLEKVPGMIQELKKNTSPDVVTYNL 231


>emb|CAN64701.1| hypothetical protein VITISV_037299 [Vitis vinifera]
          Length = 1111

 Score =  244 bits (622), Expect = 7e-63
 Identities = 115/156 (73%), Positives = 136/156 (87%)
 Frame = -1

Query: 470 IRKWKEEGHVIRKYEINRNVRLLRKMKRYKHALEICEWMRTQEDMMLVEGDYAVHLDLIS 291
           I++W+EEGH +RKYE+NR VR LRK+KRYKHALEICEWM  Q D+ L+ GDYAVHLDLI+
Sbjct: 76  IQRWREEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTKQHDIKLLAGDYAVHLDLIA 135

Query: 290 KVRGLNSAEKFFEDLPDKMKGQLACSALLHNYVQHKETSKAEALMEKMLECGFHKNPLPY 111
           K+RGL SAEKFFEDL DKMKGQ  C+ALLH YVQ+K + KAEALMEKM ECGF K PLPY
Sbjct: 136 KIRGLASAEKFFEDLSDKMKGQPTCTALLHTYVQNKVSEKAEALMEKMSECGFLKCPLPY 195

Query: 110 NHMISLYISNGQLKEAVGLIKKLKKNTAPDVLTYNL 3
           NHMISLYIS+GQL++  G+I++LKKNT+PDV+TYNL
Sbjct: 196 NHMISLYISDGQLEKVPGMIQELKKNTSPDVVTYNL 231


>ref|XP_002307578.1| predicted protein [Populus trichocarpa] gi|222857027|gb|EEE94574.1|
           predicted protein [Populus trichocarpa]
          Length = 513

 Score =  243 bits (621), Expect = 9e-63
 Identities = 113/156 (72%), Positives = 135/156 (86%)
 Frame = -1

Query: 470 IRKWKEEGHVIRKYEINRNVRLLRKMKRYKHALEICEWMRTQEDMMLVEGDYAVHLDLIS 291
           IRKWKEEGH +RKYE+NR VR LRK+KRYKHALE+CEWM  Q D+ LV GDYAVHLDLI+
Sbjct: 60  IRKWKEEGHNVRKYELNRIVRELRKLKRYKHALEVCEWMTKQSDIKLVPGDYAVHLDLIA 119

Query: 290 KVRGLNSAEKFFEDLPDKMKGQLACSALLHNYVQHKETSKAEALMEKMLECGFHKNPLPY 111
           K+RGLNSAEKFFED+PDKM+   ACSALLH YVQ+K  SKAEALMEKM ECGF KN LPY
Sbjct: 120 KIRGLNSAEKFFEDIPDKMRDYQACSALLHVYVQNKSISKAEALMEKMSECGFLKNALPY 179

Query: 110 NHMISLYISNGQLKEAVGLIKKLKKNTAPDVLTYNL 3
           NHM+S+Y++NGQL++   +I++LKK T+PDV+TYN+
Sbjct: 180 NHMLSVYVANGQLEKVAEIIQELKKKTSPDVVTYNM 215


>gb|AAL32523.1| Unknown protein [Arabidopsis thaliana] gi|27311917|gb|AAO00924.1|
           Unknown protein [Arabidopsis thaliana]
          Length = 532

 Score =  234 bits (598), Expect = 4e-60
 Identities = 111/156 (71%), Positives = 133/156 (85%)
 Frame = -1

Query: 470 IRKWKEEGHVIRKYEINRNVRLLRKMKRYKHALEICEWMRTQEDMMLVEGDYAVHLDLIS 291
           IRKWKEEGH +RKYE+NR VR LRK+KRYKHALEICEWM  QED+ L  GDYAVHLDLIS
Sbjct: 81  IRKWKEEGHSVRKYELNRIVRELRKIKRYKHALEICEWMVVQEDIKLQAGDYAVHLDLIS 140

Query: 290 KVRGLNSAEKFFEDLPDKMKGQLACSALLHNYVQHKETSKAEALMEKMLECGFHKNPLPY 111
           K+RGLNSAEKFFED+PD+M+G  AC++LLH+YVQ+K + KAEAL EKM ECGF K+ LPY
Sbjct: 141 KIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLSDKAEALFEKMGECGFLKSCLPY 200

Query: 110 NHMISLYISNGQLKEAVGLIKKLKKNTAPDVLTYNL 3
           NHM+S+YIS GQ ++   LIK+LK  T+PD++TYNL
Sbjct: 201 NHMLSMYISRGQFEKVPVLIKELKIRTSPDIVTYNL 236


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