BLASTX nr result

ID: Bupleurum21_contig00030618 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030618
         (821 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC39356.1| Met2-type cytosine DNA-methyltransferase [Daucus ...   315   e-107
gb|AAC39355.1| Met1-type cytosine DNA-methyltransferase [Daucus ...   286   5e-98
ref|XP_002267200.1| PREDICTED: DNA (cytosine-5)-methyltransferas...   262   4e-87
emb|CBI27718.3| unnamed protein product [Vitis vinifera]              262   4e-87
ref|XP_002267284.2| PREDICTED: DNA (cytosine-5)-methyltransferas...   265   7e-86

>gb|AAC39356.1| Met2-type cytosine DNA-methyltransferase [Daucus carota]
          Length = 1761

 Score =  315 bits (808), Expect(2) = e-107
 Identities = 154/208 (74%), Positives = 172/208 (82%), Gaps = 1/208 (0%)
 Frame = -2

Query: 820  PTPTSTPRKSKSNSKMKEVSWDGKSVGKTSSGEMLYKRALLHGNVIAVGGAVLVDDESA- 644
            PTPTSTPRKSKSNSK+K+VSW+GK   K SSGEMLYK+A LHGN+IAVGGAVL DD S  
Sbjct: 925  PTPTSTPRKSKSNSKLKDVSWNGKPAVKRSSGEMLYKQATLHGNMIAVGGAVLTDDASCL 984

Query: 643  ELPAVYYVEYMFETSDGMKMIHGRMLKQGSQTILGNTANERELFLTNQCLEFELMDVKKP 464
             LPA+YYVEYMFE+SDG KMIHGR+L+QGS+T+LGNTANE+ELFLTN+C+EFELMDVK P
Sbjct: 985  NLPAIYYVEYMFESSDG-KMIHGRLLRQGSETVLGNTANEQELFLTNECMEFELMDVKMP 1043

Query: 463  VVVDIRSRPWGHQHXXXXXXXXXXXXXXAEERKRKGLETEYYCKSLYWPERGAFFSLPVD 284
            V+V+IRSRPWGHQH              A ERK KGLETEYYCKSLYWPERGAFFSLPV+
Sbjct: 1044 VIVEIRSRPWGHQHRKINANADKIDKARAVERKNKGLETEYYCKSLYWPERGAFFSLPVN 1103

Query: 283  CMGLGSGVCSSCKVNKDQREKEIIKVHS 200
            CMGLGSG+CSSC  NKD  EKE   V S
Sbjct: 1104 CMGLGSGICSSCSANKDHTEKEKFSVSS 1131



 Score = 99.4 bits (246), Expect(2) = e-107
 Identities = 45/59 (76%), Positives = 50/59 (84%)
 Frame = -3

Query: 177  FVYRETEYSIHDFLYASPHHFGTERVGIETFRGGRNVGFKAFVICQLLEIVVPKTPKQA 1
            FVY+ TEYS+HDFLY SP  F TERVG ETF+GGRNVG KAF ICQLLE+VVPK P+QA
Sbjct: 1136 FVYKGTEYSVHDFLYVSPDQFATERVGQETFKGGRNVGLKAFAICQLLEVVVPKKPQQA 1194


>gb|AAC39355.1| Met1-type cytosine DNA-methyltransferase [Daucus carota]
          Length = 1545

 Score =  286 bits (732), Expect(2) = 5e-98
 Identities = 139/207 (67%), Positives = 168/207 (81%)
 Frame = -2

Query: 820  PTPTSTPRKSKSNSKMKEVSWDGKSVGKTSSGEMLYKRALLHGNVIAVGGAVLVDDESAE 641
            PTPTSTPRK+KS  K+K++ W+ KSVG+T SGE LYK+A+++G  IAVGGAVLVDDESA+
Sbjct: 711  PTPTSTPRKTKSIPKVKDIRWNRKSVGETLSGEALYKQAIVYGTEIAVGGAVLVDDESAQ 770

Query: 640  LPAVYYVEYMFETSDGMKMIHGRMLKQGSQTILGNTANERELFLTNQCLEFELMDVKKPV 461
            LPA+YYVEYMFET +G+KM+HGRML+QGS TILGNTANE E+FLTN C++FEL DVKK  
Sbjct: 771  LPAIYYVEYMFETLNGIKMLHGRMLQQGSLTILGNTANECEVFLTNDCMDFELADVKK-A 829

Query: 460  VVDIRSRPWGHQHXXXXXXXXXXXXXXAEERKRKGLETEYYCKSLYWPERGAFFSLPVDC 281
            VV+IRSRPWGHQ+               EERK+ GLETEYYCKSLY P++GAF SLP++ 
Sbjct: 830  VVEIRSRPWGHQYRKVNANADKIYRAGVEERKKNGLETEYYCKSLYCPDKGAFLSLPLNS 889

Query: 280  MGLGSGVCSSCKVNKDQREKEIIKVHS 200
            MGLGSG+CSSCK++KD  EKE   VHS
Sbjct: 890  MGLGSGICSSCKLDKDLTEKEKFVVHS 916



 Score = 98.6 bits (244), Expect(2) = 5e-98
 Identities = 45/59 (76%), Positives = 49/59 (83%)
 Frame = -3

Query: 177  FVYRETEYSIHDFLYASPHHFGTERVGIETFRGGRNVGFKAFVICQLLEIVVPKTPKQA 1
            FV+  TEYSIHDFLY SP  F TERVG ETF+GGRNVG KA+ ICQLLEI+VPK PKQA
Sbjct: 921  FVFNGTEYSIHDFLYVSPQQFSTERVGNETFKGGRNVGLKAYAICQLLEIIVPKAPKQA 979


>ref|XP_002267200.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1B-like [Vitis
            vinifera]
          Length = 1549

 Score =  262 bits (669), Expect(2) = 4e-87
 Identities = 127/206 (61%), Positives = 155/206 (75%), Gaps = 1/206 (0%)
 Frame = -2

Query: 814  PTSTPRKSKSNSKMKEVSWDGKSVGKTSSGEMLYKRALLHGNVIAVGGAVLVD-DESAEL 638
            P S  R+SK +S  KE+ WDG+ VGKT +GE LYK+A++ G+ IAVG  VLV+ DES EL
Sbjct: 710  PCSLSRQSKLHSTNKEIRWDGEFVGKTRNGESLYKQAIVCGDKIAVGDTVLVEVDESDEL 769

Query: 637  PAVYYVEYMFETSDGMKMIHGRMLKQGSQTILGNTANERELFLTNQCLEFELMDVKKPVV 458
               Y+VEYMFE+ DG KM HGRM++ GSQT+LGNTANERELF TN+C+EFEL D+K+ V+
Sbjct: 770  TITYFVEYMFESLDGRKMFHGRMMQHGSQTVLGNTANERELFTTNECVEFELQDIKQTVL 829

Query: 457  VDIRSRPWGHQHXXXXXXXXXXXXXXAEERKRKGLETEYYCKSLYWPERGAFFSLPVDCM 278
            V+IR RPWGHQH              AEERKRKGL  EYYCKSLYWPERGAFFSLP D M
Sbjct: 830  VEIRRRPWGHQHRKENANFDKIDKASAEERKRKGLPIEYYCKSLYWPERGAFFSLPFDTM 889

Query: 277  GLGSGVCSSCKVNKDQREKEIIKVHS 200
            GLG+G C SC++ + Q+EK+  KV+S
Sbjct: 890  GLGTGFCHSCEIKESQKEKDSFKVNS 915



 Score = 86.7 bits (213), Expect(2) = 4e-87
 Identities = 38/59 (64%), Positives = 46/59 (77%)
 Frame = -3

Query: 177  FVYRETEYSIHDFLYASPHHFGTERVGIETFRGGRNVGFKAFVICQLLEIVVPKTPKQA 1
            FVY+ TEYS++DF+Y SP HF  ER    TF+ GRNVG KA+V+CQ+LEIVVPK PK A
Sbjct: 920  FVYKGTEYSVNDFVYVSPQHFAAERAETGTFKAGRNVGLKAYVVCQMLEIVVPKVPKIA 978


>emb|CBI27718.3| unnamed protein product [Vitis vinifera]
          Length = 1429

 Score =  262 bits (669), Expect(2) = 4e-87
 Identities = 127/206 (61%), Positives = 155/206 (75%), Gaps = 1/206 (0%)
 Frame = -2

Query: 814  PTSTPRKSKSNSKMKEVSWDGKSVGKTSSGEMLYKRALLHGNVIAVGGAVLVD-DESAEL 638
            P S  R+SK +S  KE+ WDG+ VGKT +GE LYK+A++ G+ IAVG  VLV+ DES EL
Sbjct: 590  PCSLSRQSKLHSTNKEIRWDGEFVGKTRNGESLYKQAIVCGDKIAVGDTVLVEVDESDEL 649

Query: 637  PAVYYVEYMFETSDGMKMIHGRMLKQGSQTILGNTANERELFLTNQCLEFELMDVKKPVV 458
               Y+VEYMFE+ DG KM HGRM++ GSQT+LGNTANERELF TN+C+EFEL D+K+ V+
Sbjct: 650  TITYFVEYMFESLDGRKMFHGRMMQHGSQTVLGNTANERELFTTNECVEFELQDIKQTVL 709

Query: 457  VDIRSRPWGHQHXXXXXXXXXXXXXXAEERKRKGLETEYYCKSLYWPERGAFFSLPVDCM 278
            V+IR RPWGHQH              AEERKRKGL  EYYCKSLYWPERGAFFSLP D M
Sbjct: 710  VEIRRRPWGHQHRKENANFDKIDKASAEERKRKGLPIEYYCKSLYWPERGAFFSLPFDTM 769

Query: 277  GLGSGVCSSCKVNKDQREKEIIKVHS 200
            GLG+G C SC++ + Q+EK+  KV+S
Sbjct: 770  GLGTGFCHSCEIKESQKEKDSFKVNS 795



 Score = 86.7 bits (213), Expect(2) = 4e-87
 Identities = 38/59 (64%), Positives = 46/59 (77%)
 Frame = -3

Query: 177 FVYRETEYSIHDFLYASPHHFGTERVGIETFRGGRNVGFKAFVICQLLEIVVPKTPKQA 1
           FVY+ TEYS++DF+Y SP HF  ER    TF+ GRNVG KA+V+CQ+LEIVVPK PK A
Sbjct: 800 FVYKGTEYSVNDFVYVSPQHFAAERAETGTFKAGRNVGLKAYVVCQMLEIVVPKVPKIA 858


>ref|XP_002267284.2| PREDICTED: DNA (cytosine-5)-methyltransferase 1B-like [Vitis
            vinifera]
          Length = 1530

 Score =  265 bits (676), Expect(2) = 7e-86
 Identities = 125/206 (60%), Positives = 158/206 (76%), Gaps = 1/206 (0%)
 Frame = -2

Query: 814  PTSTPRKSKSNSKMKEVSWDGKSVGKTSSGEMLYKRALLHGNVIAVGGAVLVD-DESAEL 638
            P+S P +SK +S  KE+ WDG+ VGKTSSG+ LYK+A++ G+ + VGG VLV+ DES EL
Sbjct: 696  PSSLPGRSKLHSTSKEIRWDGEFVGKTSSGDTLYKQAIIGGDKVTVGGVVLVEVDESDEL 755

Query: 637  PAVYYVEYMFETSDGMKMIHGRMLKQGSQTILGNTANERELFLTNQCLEFELMDVKKPVV 458
            P +Y +E MFE+ +G KM HGRM+++GSQT+LGNTAN RELFLTN+CLEFEL  +K+ VV
Sbjct: 756  PVIYLIECMFESFNGRKMFHGRMMQRGSQTLLGNTANARELFLTNECLEFELQGIKQMVV 815

Query: 457  VDIRSRPWGHQHXXXXXXXXXXXXXXAEERKRKGLETEYYCKSLYWPERGAFFSLPVDCM 278
            VDIR  PWGHQH              +EERKRKGL ++YYCKSLYWPERGAFFSLP D M
Sbjct: 816  VDIRRMPWGHQHRKENANFDKIDRANSEERKRKGLPSDYYCKSLYWPERGAFFSLPFDTM 875

Query: 277  GLGSGVCSSCKVNKDQREKEIIKVHS 200
            G+G+G C SCK+ + Q+EK+ IKV+S
Sbjct: 876  GIGTGFCHSCKIKESQKEKDSIKVNS 901



 Score = 79.7 bits (195), Expect(2) = 7e-86
 Identities = 34/59 (57%), Positives = 46/59 (77%)
 Frame = -3

Query: 177  FVYRETEYSIHDFLYASPHHFGTERVGIETFRGGRNVGFKAFVICQLLEIVVPKTPKQA 1
            FVY+ TEYSI +F+Y SP +F  +R+ I TF+ GRNVG KA+V+CQ++ I+VPK PK A
Sbjct: 906  FVYKGTEYSIDEFVYVSPQYFAVDRMEIGTFKAGRNVGLKAYVVCQMMGIIVPKAPKIA 964


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