BLASTX nr result

ID: Bupleurum21_contig00030592 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030592
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA11766.1| high mobility group protein [Canavalia gladiata]...   109   2e-22
ref|XP_004145857.1| PREDICTED: HMG-Y-related protein A-like [Cuc...   104   6e-21
dbj|BAA11767.1| high mobility group protein [Canavalia gladiata]...   101   5e-20
gb|ACJ83992.1| unknown [Medicago truncatula] gi|388511479|gb|AFK...   100   9e-20
ref|XP_003616293.1| HMG-Y-related protein A [Medicago truncatula...   100   9e-20

>dbj|BAA11766.1| high mobility group protein [Canavalia gladiata]
           gi|1483173|dbj|BAA13133.1| high mobility group protein
           [Canavalia gladiata]
          Length = 178

 Score =  109 bits (273), Expect = 2e-22
 Identities = 52/79 (65%), Positives = 64/79 (81%)
 Frame = -1

Query: 328 MATEQVSKPPSLPPYPEMIMMAMDAQKDQQDGLTKAAISKYMESTYGELPAGHKNLVTTH 149
           MATE+V+KPPSLPPYPEM+M A+DA  ++  G  K+AISKY+ESTYGELP GH  L+  H
Sbjct: 1   MATEEVNKPPSLPPYPEMVMKALDAL-NEPSGSNKSAISKYIESTYGELPDGHATLLAHH 59

Query: 148 LNTMKQNGDLVLVKNNYMK 92
           LN MK +G+LV +KNNYMK
Sbjct: 60  LNKMKDSGELVFLKNNYMK 78


>ref|XP_004145857.1| PREDICTED: HMG-Y-related protein A-like [Cucumis sativus]
           gi|449484561|ref|XP_004156916.1| PREDICTED:
           HMG-Y-related protein A-like [Cucumis sativus]
          Length = 180

 Score =  104 bits (260), Expect = 6e-21
 Identities = 50/79 (63%), Positives = 62/79 (78%)
 Frame = -1

Query: 328 MATEQVSKPPSLPPYPEMIMMAMDAQKDQQDGLTKAAISKYMESTYGELPAGHKNLVTTH 149
           MAT++V+KPPSLPPYPEMI  A++A  +  +G  K+ ISKY+ESTYG LP GH +L+T H
Sbjct: 1   MATQEVNKPPSLPPYPEMIFRAIEAL-NSDNGSNKSTISKYIESTYGNLPTGHSSLLTHH 59

Query: 148 LNTMKQNGDLVLVKNNYMK 92
           LN MK +GDLV  KNNYMK
Sbjct: 60  LNMMKASGDLVFWKNNYMK 78


>dbj|BAA11767.1| high mobility group protein [Canavalia gladiata]
           gi|1483175|dbj|BAA13134.1| high mobility group protein
           [Canavalia gladiata]
          Length = 178

 Score =  101 bits (252), Expect = 5e-20
 Identities = 49/79 (62%), Positives = 63/79 (79%)
 Frame = -1

Query: 328 MATEQVSKPPSLPPYPEMIMMAMDAQKDQQDGLTKAAISKYMESTYGELPAGHKNLVTTH 149
           MATE+V+KPPSLPPY EMI  A+D+  ++ +G  K+AISKY+EST GELP GH  L+  H
Sbjct: 1   MATEEVNKPPSLPPYTEMITKALDSL-NEPNGSNKSAISKYIESTCGELPDGHSTLLAHH 59

Query: 148 LNTMKQNGDLVLVKNNYMK 92
           LN MK++G+LV +KNNYMK
Sbjct: 60  LNKMKESGELVFLKNNYMK 78


>gb|ACJ83992.1| unknown [Medicago truncatula] gi|388511479|gb|AFK43801.1| unknown
           [Medicago truncatula]
          Length = 193

 Score =  100 bits (250), Expect = 9e-20
 Identities = 48/79 (60%), Positives = 61/79 (77%)
 Frame = -1

Query: 328 MATEQVSKPPSLPPYPEMIMMAMDAQKDQQDGLTKAAISKYMESTYGELPAGHKNLVTTH 149
           MAT++V+KP SLPPYPEMIM A++A  ++ +G  K++IS Y+ES YGELP GH  ++  H
Sbjct: 1   MATQEVNKPLSLPPYPEMIMKALEAL-NEPNGSNKSSISNYIESIYGELPEGHSIVLANH 59

Query: 148 LNTMKQNGDLVLVKNNYMK 92
           LN MK NGDLV  KNNYMK
Sbjct: 60  LNQMKDNGDLVFAKNNYMK 78


>ref|XP_003616293.1| HMG-Y-related protein A [Medicago truncatula]
           gi|217071498|gb|ACJ84109.1| unknown [Medicago
           truncatula] gi|355517628|gb|AES99251.1| HMG-Y-related
           protein A [Medicago truncatula]
           gi|388515525|gb|AFK45824.1| unknown [Medicago
           truncatula]
          Length = 204

 Score =  100 bits (250), Expect = 9e-20
 Identities = 48/79 (60%), Positives = 61/79 (77%)
 Frame = -1

Query: 328 MATEQVSKPPSLPPYPEMIMMAMDAQKDQQDGLTKAAISKYMESTYGELPAGHKNLVTTH 149
           MAT++V+KP SLPPYPEMIM A++A  ++ +G  K++IS Y+ES YGELP GH  ++  H
Sbjct: 1   MATQEVNKPLSLPPYPEMIMKALEAL-NEPNGSNKSSISNYIESIYGELPEGHSIVLANH 59

Query: 148 LNTMKQNGDLVLVKNNYMK 92
           LN MK NGDLV  KNNYMK
Sbjct: 60  LNQMKDNGDLVFAKNNYMK 78


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