BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030579
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containi...   127   9e-28
ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containi...   125   5e-27
ref|NP_199702.1| pentatricopeptide repeat-containing protein [Ar...   122   2e-26
ref|XP_002865693.1| pentatricopeptide repeat-containing protein ...   122   3e-26
ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containi...   122   3e-26

>ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 642

 Score =  127 bits (319), Expect = 9e-28
 Identities = 63/110 (57%), Positives = 79/110 (71%), Gaps = 2/110 (1%)
 Frame = -1

Query: 325 PSVLKACGNIGLVEEGKQIHGMIKKYGIESDEFVLSNLVRMYVMCGAMGDAFILFEANVC 146
           PSVLKAC     + EGKQIHG+I K+G   DEFV+SNLVRMYVMC  M DA+ LF  NV 
Sbjct: 126 PSVLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVV 185

Query: 145 --RNKCESMNFDGKRQMGNVVLWNVMVDGYVRAGNFRAALDMFNEMPQRS 2
                C+ M  D ++Q GNVVLWN+M+DG VR G+ ++A ++F+EMPQRS
Sbjct: 186 DFDGSCQ-MELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPQRS 234


>ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 642

 Score =  125 bits (313), Expect = 5e-27
 Identities = 62/110 (56%), Positives = 78/110 (70%), Gaps = 2/110 (1%)
 Frame = -1

Query: 325 PSVLKACGNIGLVEEGKQIHGMIKKYGIESDEFVLSNLVRMYVMCGAMGDAFILFEANVC 146
           PSVLKAC     + EGKQIHG+I K+G   DEFV+SNLVRMYVMC  M DA+ LF  NV 
Sbjct: 126 PSVLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVV 185

Query: 145 --RNKCESMNFDGKRQMGNVVLWNVMVDGYVRAGNFRAALDMFNEMPQRS 2
                C+ M  D ++Q GNVVLWN+M+DG VR G+ ++A ++F+EMP RS
Sbjct: 186 DFDGSCQ-MELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPPRS 234


>ref|NP_199702.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75170778|sp|Q9FI80.1|PP425_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g48910 gi|10177180|dbj|BAB10314.1| selenium-binding
           protein-like [Arabidopsis thaliana]
           gi|15810559|gb|AAL07167.1| putative selenium-binding
           protein [Arabidopsis thaliana]
           gi|332008359|gb|AED95742.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 646

 Score =  122 bits (307), Expect = 2e-26
 Identities = 60/108 (55%), Positives = 77/108 (71%)
 Frame = -1

Query: 325 PSVLKACGNIGLVEEGKQIHGMIKKYGIESDEFVLSNLVRMYVMCGAMGDAFILFEANVC 146
           PSVLKAC   G ++EGKQIHG+  KYG   DEFV+SNLVRMYVMCG M DA +LF  N+ 
Sbjct: 132 PSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNII 191

Query: 145 RNKCESMNFDGKRQMGNVVLWNVMVDGYVRAGNFRAALDMFNEMPQRS 2
                 M  D +++ G +VLWNVM+DGY+R G+ +AA  +F++M QRS
Sbjct: 192 EKDMVVMT-DRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRS 238


>ref|XP_002865693.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297311528|gb|EFH41952.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 640

 Score =  122 bits (306), Expect = 3e-26
 Identities = 59/108 (54%), Positives = 78/108 (72%)
 Frame = -1

Query: 325 PSVLKACGNIGLVEEGKQIHGMIKKYGIESDEFVLSNLVRMYVMCGAMGDAFILFEANVC 146
           PSVLKAC   G +++GKQIHG+  KYG   DEFV+SNLVRMYV+CG M DA +LF  N+ 
Sbjct: 125 PSVLKACAKTGKIQQGKQIHGLALKYGFGGDEFVMSNLVRMYVICGLMKDACVLFYKNII 184

Query: 145 RNKCESMNFDGKRQMGNVVLWNVMVDGYVRAGNFRAALDMFNEMPQRS 2
             +   M  D +++ G VVLWNVM+DGY+R G+ +AA  +F++M QRS
Sbjct: 185 EREMVMM-IDRRKRDGEVVLWNVMIDGYMRLGDCKAARMLFDKMRQRS 231


>ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Vitis vinifera]
          Length = 631

 Score =  122 bits (306), Expect = 3e-26
 Identities = 57/108 (52%), Positives = 76/108 (70%)
 Frame = -1

Query: 325 PSVLKACGNIGLVEEGKQIHGMIKKYGIESDEFVLSNLVRMYVMCGAMGDAFILFEANVC 146
           PSV KACG    + EG+Q+HG+  K+G++SDEFV+SN+VRMY+ CG M DA  LF   V 
Sbjct: 116 PSVFKACGRAERLREGRQVHGLAVKFGLDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVF 175

Query: 145 RNKCESMNFDGKRQMGNVVLWNVMVDGYVRAGNFRAALDMFNEMPQRS 2
            + C+ +    +R  G+VVLWNVM+DGYVR G    A ++F+EMPQRS
Sbjct: 176 VDGCDGIRDKKRRVDGDVVLWNVMIDGYVRIGELEVARNLFDEMPQRS 223