BLASTX nr result

ID: Bupleurum21_contig00030558 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030558
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002876517.1| mitochondrial ribosomal protein L51/S25/CI-B...   194   8e-48
ref|NP_191524.1| mitochondrial ribosomal protein L51/S25/CI-B8 f...   193   1e-47
ref|XP_002276080.1| PREDICTED: 60S ribosomal protein L51, mitoch...   193   1e-47
ref|XP_003550025.1| PREDICTED: 60S ribosomal protein L51, mitoch...   187   6e-46
gb|AFK38190.1| unknown [Medicago truncatula]                          187   1e-45

>ref|XP_002876517.1| mitochondrial ribosomal protein L51/S25/CI-B8 family protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|297322355|gb|EFH52776.1| mitochondrial ribosomal
           protein L51/S25/CI-B8 family protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 119

 Score =  194 bits (492), Expect = 8e-48
 Identities = 92/114 (80%), Positives = 101/114 (88%)
 Frame = +1

Query: 4   MSQRGVWQLKKLVVSYCNWGGSSRGVREFMESKLPAFKESNPQLEVETRHIGGQHPHLEG 183
           M+ RGVWQLKKLVVSYCNWGGSSRG+R FMES+LPA KE NPQLEV T    GQHP+L+G
Sbjct: 1   MALRGVWQLKKLVVSYCNWGGSSRGIRAFMESELPALKEKNPQLEVVTELSRGQHPYLKG 60

Query: 184 IYRNKNERTVCVRNMTPEEVLECATKLRNSLGRKVVKLKTRHVTKHPSVQGTWT 345
           IYRN+NER VCV+NM PEEVL  AT+LRNSLGRKVVKL+TRHVTKHPSVQGTWT
Sbjct: 61  IYRNRNERVVCVKNMDPEEVLLNATRLRNSLGRKVVKLRTRHVTKHPSVQGTWT 114


>ref|NP_191524.1| mitochondrial ribosomal protein L51/S25/CI-B8 family protein
           [Arabidopsis thaliana] gi|6996301|emb|CAB75462.1|
           putative protein [Arabidopsis thaliana]
           gi|21617971|gb|AAM67021.1| unknown [Arabidopsis
           thaliana] gi|27808540|gb|AAO24550.1| At3g59650
           [Arabidopsis thaliana] gi|110743592|dbj|BAE99633.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332646429|gb|AEE79950.1| mitochondrial ribosomal
           protein L51/S25/CI-B8 family protein [Arabidopsis
           thaliana]
          Length = 119

 Score =  193 bits (491), Expect = 1e-47
 Identities = 92/114 (80%), Positives = 101/114 (88%)
 Frame = +1

Query: 4   MSQRGVWQLKKLVVSYCNWGGSSRGVREFMESKLPAFKESNPQLEVETRHIGGQHPHLEG 183
           M+ RGVWQLKKLVVSYCNWGGSSRG+R FMES+LPA KE NPQLEV T    GQHP+L+G
Sbjct: 1   MALRGVWQLKKLVVSYCNWGGSSRGIRAFMESELPALKEKNPQLEVITELSRGQHPYLKG 60

Query: 184 IYRNKNERTVCVRNMTPEEVLECATKLRNSLGRKVVKLKTRHVTKHPSVQGTWT 345
           IYRN+NER VCV+NM PEEVL  AT+LRNSLGRKVVKL+TRHVTKHPSVQGTWT
Sbjct: 61  IYRNRNERVVCVKNMDPEEVLLNATRLRNSLGRKVVKLRTRHVTKHPSVQGTWT 114


>ref|XP_002276080.1| PREDICTED: 60S ribosomal protein L51, mitochondrial isoform 1
           [Vitis vinifera] gi|225434100|ref|XP_002276106.1|
           PREDICTED: 60S ribosomal protein L51, mitochondrial
           isoform 2 [Vitis vinifera] gi|147861396|emb|CAN83982.1|
           hypothetical protein VITISV_001097 [Vitis vinifera]
           gi|296084281|emb|CBI24669.3| unnamed protein product
           [Vitis vinifera]
          Length = 119

 Score =  193 bits (490), Expect = 1e-47
 Identities = 89/114 (78%), Positives = 102/114 (89%)
 Frame = +1

Query: 4   MSQRGVWQLKKLVVSYCNWGGSSRGVREFMESKLPAFKESNPQLEVETRHIGGQHPHLEG 183
           M+ RGVWQL+KL+VSY +WGGSSRG+R FMES LPAFKESNPQLEV T  I GQHPHL+G
Sbjct: 1   MALRGVWQLQKLIVSYSDWGGSSRGIRAFMESHLPAFKESNPQLEVVTELIRGQHPHLKG 60

Query: 184 IYRNKNERTVCVRNMTPEEVLECATKLRNSLGRKVVKLKTRHVTKHPSVQGTWT 345
            Y+NKNER +CV+NMTPE+VL  AT+LRN+LGRKV+KLKTRHVTKHPSVQGTWT
Sbjct: 61  FYKNKNERVICVKNMTPEDVLHHATRLRNALGRKVLKLKTRHVTKHPSVQGTWT 114


>ref|XP_003550025.1| PREDICTED: 60S ribosomal protein L51, mitochondrial-like [Glycine
           max]
          Length = 119

 Score =  187 bits (476), Expect = 6e-46
 Identities = 85/114 (74%), Positives = 98/114 (85%)
 Frame = +1

Query: 4   MSQRGVWQLKKLVVSYCNWGGSSRGVREFMESKLPAFKESNPQLEVETRHIGGQHPHLEG 183
           M+ RGVWQL KL+VSYCNWGGSSRG+R FMES LP FKE NPQLEV T  I GQHPHL+ 
Sbjct: 1   MALRGVWQLNKLIVSYCNWGGSSRGIRAFMESHLPTFKEKNPQLEVVTELIRGQHPHLKA 60

Query: 184 IYRNKNERTVCVRNMTPEEVLECATKLRNSLGRKVVKLKTRHVTKHPSVQGTWT 345
            Y+NKN+R +CV+NM PE++L  AT+LRN+LGRKVVKL+TRHVTKHPSVQGTWT
Sbjct: 61  YYKNKNQRVICVKNMDPEDILLHATRLRNALGRKVVKLRTRHVTKHPSVQGTWT 114


>gb|AFK38190.1| unknown [Medicago truncatula]
          Length = 119

 Score =  187 bits (474), Expect = 1e-45
 Identities = 85/114 (74%), Positives = 101/114 (88%)
 Frame = +1

Query: 4   MSQRGVWQLKKLVVSYCNWGGSSRGVREFMESKLPAFKESNPQLEVETRHIGGQHPHLEG 183
           M+ RGVWQLKKLVVS+ +WGGSSRG+R FMES LPAFKE+NPQLEV+T  I GQHPHL+ 
Sbjct: 1   MALRGVWQLKKLVVSFSDWGGSSRGIRAFMESHLPAFKEANPQLEVDTEMIRGQHPHLKA 60

Query: 184 IYRNKNERTVCVRNMTPEEVLECATKLRNSLGRKVVKLKTRHVTKHPSVQGTWT 345
            Y+N+N+R VCV+NM PEE+L  AT+LRN+LGRKV+KL+TRHVTKHPSVQGTWT
Sbjct: 61  FYKNRNDRVVCVKNMDPEEILLHATRLRNALGRKVIKLRTRHVTKHPSVQGTWT 114


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