BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030554
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]             135   3e-30
gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris]               133   2e-29
gb|AAD30632.1|AC006085_5 Hypothetical protein [Arabidopsis thali...   132   2e-29
emb|CAE03046.1| OSJNBa0084A10.21 [Oryza sativa Japonica Group]        129   2e-28
emb|CAH67128.1| H0315E07.6 [Oryza sativa Indica Group]                129   2e-28

>gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1103

 Score =  135 bits (341), Expect = 3e-30
 Identities = 62/108 (57%), Positives = 81/108 (75%)
 Frame = +2

Query: 2   ISSVLVREEVDRQLPVYYVSKRLLDAETRYNNMEKLVYSLIISARKLRPYFQSHKIEVRT 181
           +S VLVRE+   Q P+YYVSK + D ETRY  MEKL  +++ SARKLRPYFQSH ++V T
Sbjct: 329 VSGVLVREDRGEQKPIYYVSKSMTDPETRYTMMEKLALAVVTSARKLRPYFQSHPVQVLT 388

Query: 182 TYPLRQVLHKPEMSGRMMKWAIELGQFDIEYKAHNAIKAQALADFVAE 325
             PLR +LH P  SGR+ KWA+EL ++DIE+K+  ++KAQ LADF+ E
Sbjct: 389 NQPLRTILHSPSQSGRLAKWAVELSEYDIEFKSRISMKAQVLADFLTE 436


>gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris]
          Length = 1859

 Score =  133 bits (334), Expect = 2e-29
 Identities = 61/111 (54%), Positives = 87/111 (78%)
 Frame = +2

Query: 2    ISSVLVREEVDRQLPVYYVSKRLLDAETRYNNMEKLVYSLIISARKLRPYFQSHKIEVRT 181
            +SS LV+E    + PVY+VS+ L DAETRY  +EK+ ++L+I+AR++R YFQ+HK+ VRT
Sbjct: 1209 VSSALVQEIKAEERPVYFVSRVLHDAETRYQMVEKVAFALVITARRMRMYFQNHKVIVRT 1268

Query: 182  TYPLRQVLHKPEMSGRMMKWAIELGQFDIEYKAHNAIKAQALADFVAEFTP 334
             YP+ ++L KP+++GRM+ WA+EL +F IEY+   AIK+QALADF AE TP
Sbjct: 1269 NYPIMKILTKPDLAGRMIGWAVELSEFHIEYQPRGAIKSQALADFTAELTP 1319


>gb|AAD30632.1|AC006085_5 Hypothetical protein [Arabidopsis thaliana]
          Length = 1295

 Score =  132 bits (333), Expect = 2e-29
 Identities = 63/108 (58%), Positives = 81/108 (75%)
 Frame = +2

Query: 2    ISSVLVREEVDRQLPVYYVSKRLLDAETRYNNMEKLVYSLIISARKLRPYFQSHKIEVRT 181
            +SSVLVR E   + P++YVSK   DAETRY  MEKL  +++ SARKLRPYFQSH I V T
Sbjct: 801  VSSVLVRVERSDERPIFYVSKSFSDAETRYPMMEKLALAVVTSARKLRPYFQSHPIVVLT 860

Query: 182  TYPLRQVLHKPEMSGRMMKWAIELGQFDIEYKAHNAIKAQALADFVAE 325
            + PLR +LH P  SGR+ KWAIEL +FD+E++A  ++K+Q LADF+ E
Sbjct: 861  SLPLRAILHSPSQSGRLAKWAIELSEFDLEFRARTSLKSQVLADFLIE 908


>emb|CAE03046.1| OSJNBa0084A10.21 [Oryza sativa Japonica Group]
          Length = 909

 Score =  129 bits (324), Expect = 2e-28
 Identities = 57/100 (57%), Positives = 84/100 (84%)
 Frame = +2

Query: 38  QLPVYYVSKRLLDAETRYNNMEKLVYSLIISARKLRPYFQSHKIEVRTTYPLRQVLHKPE 217
           Q PVY+VS+ L DA+TRY   +K++Y++++++RKLR YFQ+H++ V T+YPL Q+LH  E
Sbjct: 251 QRPVYFVSEALRDAKTRYPQAQKMLYAILMASRKLRHYFQAHRVTVVTSYPLAQILHNRE 310

Query: 218 MSGRMMKWAIELGQFDIEYKAHNAIKAQALADFVAEFTPA 337
            +GR++KWAIEL +FD+ ++ H+AIK+QALADFVAE+TPA
Sbjct: 311 GTGRVVKWAIELSEFDLHFEPHHAIKSQALADFVAEWTPA 350


>emb|CAH67128.1| H0315E07.6 [Oryza sativa Indica Group]
          Length = 1891

 Score =  129 bits (324), Expect = 2e-28
 Identities = 57/100 (57%), Positives = 84/100 (84%)
 Frame = +2

Query: 38   QLPVYYVSKRLLDAETRYNNMEKLVYSLIISARKLRPYFQSHKIEVRTTYPLRQVLHKPE 217
            Q PVY+VS+ L DA+TRY   +K++Y++++++RKLR YFQ+H++ V T+YPL Q+LH  E
Sbjct: 1233 QRPVYFVSEALRDAKTRYPQAQKMLYAILMASRKLRHYFQAHRVTVVTSYPLAQILHNRE 1292

Query: 218  MSGRMMKWAIELGQFDIEYKAHNAIKAQALADFVAEFTPA 337
             +GR++KWAIEL +FD+ ++ H+AIK+QALADFVAE+TPA
Sbjct: 1293 GTGRVVKWAIELSEFDLHFEPHHAIKSQALADFVAEWTPA 1332