BLASTX nr result

ID: Bupleurum21_contig00030552 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030552
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277667.2| PREDICTED: uncharacterized protein LOC100246...   106   2e-21
emb|CBI31609.3| unnamed protein product [Vitis vinifera]              106   2e-21
ref|XP_004138448.1| PREDICTED: protein NEDD1-like [Cucumis sativ...    97   1e-18
ref|XP_002312120.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-18
ref|XP_002315198.1| predicted protein [Populus trichocarpa] gi|2...    96   3e-18

>ref|XP_002277667.2| PREDICTED: uncharacterized protein LOC100246247 [Vitis vinifera]
          Length = 805

 Score =  106 bits (264), Expect = 2e-21
 Identities = 62/107 (57%), Positives = 71/107 (66%), Gaps = 6/107 (5%)
 Frame = +2

Query: 2   WDDNLGARKNY---DKK-SSLAFPSPMR-FPLSEEGNSDLHPILDWKSGSNSKQDDAHSS 166
           WD++  A+K++   DKK SSL FPS  R FP  ++G  D HPI DWKS S S+QDD  +S
Sbjct: 450 WDNHEAAKKDHLPVDKKPSSLLFPSSSRRFPFVDDGAID-HPIFDWKSSSTSRQDDTRAS 508

Query: 167 FSQLVSTPAXXXXXXXX-ITPPEAWGGERLSDKFNHARQSVTLPSRF 304
            S L STPA         ITPPEAWGGERLSDKF H RQS  LPSRF
Sbjct: 509 LSLLGSTPAPSSKSGEDSITPPEAWGGERLSDKFAHHRQSANLPSRF 555


>emb|CBI31609.3| unnamed protein product [Vitis vinifera]
          Length = 779

 Score =  106 bits (264), Expect = 2e-21
 Identities = 62/107 (57%), Positives = 71/107 (66%), Gaps = 6/107 (5%)
 Frame = +2

Query: 2   WDDNLGARKNY---DKK-SSLAFPSPMR-FPLSEEGNSDLHPILDWKSGSNSKQDDAHSS 166
           WD++  A+K++   DKK SSL FPS  R FP  ++G  D HPI DWKS S S+QDD  +S
Sbjct: 424 WDNHEAAKKDHLPVDKKPSSLLFPSSSRRFPFVDDGAID-HPIFDWKSSSTSRQDDTRAS 482

Query: 167 FSQLVSTPAXXXXXXXX-ITPPEAWGGERLSDKFNHARQSVTLPSRF 304
            S L STPA         ITPPEAWGGERLSDKF H RQS  LPSRF
Sbjct: 483 LSLLGSTPAPSSKSGEDSITPPEAWGGERLSDKFAHHRQSANLPSRF 529


>ref|XP_004138448.1| PREDICTED: protein NEDD1-like [Cucumis sativus]
           gi|449495290|ref|XP_004159790.1| PREDICTED: protein
           NEDD1-like [Cucumis sativus]
          Length = 799

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 60/108 (55%), Positives = 72/108 (66%), Gaps = 7/108 (6%)
 Frame = +2

Query: 2   WDDNLGARKN--YDKKS-SLAFPSPMR-FPLSEEGNSDLHPILDWKSGSNSKQDDAHSSF 169
           WDD+ G++K+  +DKK  S+ FPS  R F   E+G SD HPI +WKS S+SKQDD  SS 
Sbjct: 445 WDDHNGSKKDNPFDKKPLSMLFPSSSRRFSSIEDGASD-HPIFNWKS-SSSKQDDIRSSS 502

Query: 170 SQLVSTPAXXXXXXXX---ITPPEAWGGERLSDKFNHARQSVTLPSRF 304
            QL STPA           ITPPEAWGGE+LS+KF   RQ +TLPSRF
Sbjct: 503 GQLGSTPAPTVNSKNEDSSITPPEAWGGEKLSEKFAQLRQPMTLPSRF 550


>ref|XP_002312120.1| predicted protein [Populus trichocarpa] gi|222851940|gb|EEE89487.1|
           predicted protein [Populus trichocarpa]
          Length = 785

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 58/107 (54%), Positives = 66/107 (61%), Gaps = 6/107 (5%)
 Frame = +2

Query: 2   WDDNLGARKN---YDKK-SSLAFPSPMR-FPLSEEGNSDLHPILDWKSGSNSKQDDAHSS 166
           W D+ G +K+    DKK SSL FPS  R FP +E+G +D HPI DWKS S S+QDD  S 
Sbjct: 432 WTDHEGLKKDNLPVDKKPSSLLFPSSSRRFPFAEDGTND-HPIFDWKSSSTSRQDDTQSF 490

Query: 167 FSQLVSTPAXXXXXXXX-ITPPEAWGGERLSDKFNHARQSVTLPSRF 304
            S   STP          ITPPEAWGGERLSDK  H RQ + LP RF
Sbjct: 491 TSLGGSTPTPSSKSEDSSITPPEAWGGERLSDKIAHLRQPLNLPPRF 537


>ref|XP_002315198.1| predicted protein [Populus trichocarpa] gi|222864238|gb|EEF01369.1|
           predicted protein [Populus trichocarpa]
          Length = 777

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 58/108 (53%), Positives = 67/108 (62%), Gaps = 6/108 (5%)
 Frame = +2

Query: 2   WDDNLGARKN---YDKK-SSLAFPSPMR-FPLSEEGNSDLHPILDWKSGSNSKQDDAHSS 166
           WDD  G +K+    DKK SSL FPS +R FP  E+G +D HPI DWKS S S+QD+A S 
Sbjct: 431 WDDQEGLKKDNLSVDKKPSSLLFPSSIRRFPFQEDGIND-HPIFDWKSSSTSRQDEARSF 489

Query: 167 FSQLVSTPAXXXXXXXX-ITPPEAWGGERLSDKFNHARQSVTLPSRFA 307
                STP+         ITPPEAWGGERLSD   H  Q + LPSRFA
Sbjct: 490 TLPGGSTPSPSSKSEDSSITPPEAWGGERLSDSIAHLPQPLNLPSRFA 537


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