BLASTX nr result

ID: Bupleurum21_contig00030541 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030541
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004133923.1| PREDICTED: DNA repair protein RAD51 homolog ...   203   1e-50
ref|XP_002280748.1| PREDICTED: DNA repair protein RAD51 homolog ...   201   4e-50
ref|XP_002511689.1| DNA repair and recombination protein radA, p...   200   1e-49
tpg|DAA58661.1| TPA: hypothetical protein ZEAMMB73_968311 [Zea m...   199   3e-49
tpg|DAA58659.1| TPA: hypothetical protein ZEAMMB73_968311 [Zea m...   199   3e-49

>ref|XP_004133923.1| PREDICTED: DNA repair protein RAD51 homolog 3-like [Cucumis
           sativus] gi|449480051|ref|XP_004155785.1| PREDICTED: DNA
           repair protein RAD51 homolog 3-like [Cucumis sativus]
          Length = 346

 Score =  203 bits (517), Expect = 1e-50
 Identities = 97/137 (70%), Positives = 115/137 (83%)
 Frame = +2

Query: 2   KDLLENIYYFRVCSYTEQIALINYLGKFIKEQKNVKIVIVDSITFHFRQDFEDMALRTRX 181
           KD+LENI+YFRVCSYTEQIALINYL KFI E K+VK+VIVDS+TFHFRQ+F+D+ALRTR 
Sbjct: 189 KDILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFDDLALRTRL 248

Query: 182 XXXXXXXXXXXXXDFRLAVVLLNQVTTKYSEGSVHLTLALGDSWSHACTNRVILHWNGNE 361
                         F LAVVL NQVTTK++EGS  LTLALGDSWSH+CTNR+IL+WNG+E
Sbjct: 249 LSEMALKFMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRIILYWNGDE 308

Query: 362 RYAHLDKSPTLQSSSAP 412
           RYA+L+KSP+LQS+SAP
Sbjct: 309 RYAYLEKSPSLQSASAP 325


>ref|XP_002280748.1| PREDICTED: DNA repair protein RAD51 homolog 3 [Vitis vinifera]
           gi|296089196|emb|CBI38899.3| unnamed protein product
           [Vitis vinifera]
          Length = 346

 Score =  201 bits (512), Expect = 4e-50
 Identities = 95/137 (69%), Positives = 114/137 (83%)
 Frame = +2

Query: 2   KDLLENIYYFRVCSYTEQIALINYLGKFIKEQKNVKIVIVDSITFHFRQDFEDMALRTRX 181
           KD L+NI+YFRVCSYTEQIA+INYL KFI E K+V +VI+DS+TFHFRQDF+D+ALRTR 
Sbjct: 189 KDFLQNIFYFRVCSYTEQIAMINYLDKFISEHKDVNVVIIDSVTFHFRQDFDDLALRTRL 248

Query: 182 XXXXXXXXXXXXXDFRLAVVLLNQVTTKYSEGSVHLTLALGDSWSHACTNRVILHWNGNE 361
                         F LAVVLLNQVTTK++EGS  LTLALGDSWSH+CTNRVIL+WNG+E
Sbjct: 249 LSGMALKLMKLAKKFSLAVVLLNQVTTKHTEGSFQLTLALGDSWSHSCTNRVILYWNGDE 308

Query: 362 RYAHLDKSPTLQSSSAP 412
           RYA++DKSP+L+S+SAP
Sbjct: 309 RYAYIDKSPSLRSASAP 325


>ref|XP_002511689.1| DNA repair and recombination protein radA, putative [Ricinus
           communis] gi|223548869|gb|EEF50358.1| DNA repair and
           recombination protein radA, putative [Ricinus communis]
          Length = 346

 Score =  200 bits (508), Expect = 1e-49
 Identities = 93/137 (67%), Positives = 114/137 (83%)
 Frame = +2

Query: 2   KDLLENIYYFRVCSYTEQIALINYLGKFIKEQKNVKIVIVDSITFHFRQDFEDMALRTRX 181
           KD+LENIYYFRVCSYTEQ+AL+NYL KFI E ++VK+VI+DSITFHFRQDF+D+ALRTR 
Sbjct: 189 KDILENIYYFRVCSYTEQVALVNYLEKFISEHRDVKVVIIDSITFHFRQDFDDLALRTRV 248

Query: 182 XXXXXXXXXXXXXDFRLAVVLLNQVTTKYSEGSVHLTLALGDSWSHACTNRVILHWNGNE 361
                         F LAVVLLNQVTTK++EGS  L LALG+SWSH+CTNR+IL+WN NE
Sbjct: 249 LSGMALKLMKIAKSFSLAVVLLNQVTTKHTEGSFQLGLALGESWSHSCTNRIILYWNSNE 308

Query: 362 RYAHLDKSPTLQSSSAP 412
           RYA++DKSP+L+S++AP
Sbjct: 309 RYAYIDKSPSLKSATAP 325


>tpg|DAA58661.1| TPA: hypothetical protein ZEAMMB73_968311 [Zea mays]
          Length = 308

 Score =  199 bits (505), Expect = 3e-49
 Identities = 93/134 (69%), Positives = 111/134 (82%)
 Frame = +2

Query: 11  LENIYYFRVCSYTEQIALINYLGKFIKEQKNVKIVIVDSITFHFRQDFEDMALRTRXXXX 190
           L +IYYFR+CSYTEQIA+INY+ KF++E K+V+IVI+DS+TFHFRQDFED+ALRTR    
Sbjct: 153 LADIYYFRICSYTEQIAVINYMEKFLREHKDVRIVIIDSVTFHFRQDFEDLALRTRVLSG 212

Query: 191 XXXXXXXXXXDFRLAVVLLNQVTTKYSEGSVHLTLALGDSWSHACTNRVILHWNGNERYA 370
                      + LAVVLLNQVTTK++EGS  LTLALGDSWSH+CTNR+ILHWNGNERYA
Sbjct: 213 LSLKLMKIAKTYNLAVVLLNQVTTKFTEGSFQLTLALGDSWSHSCTNRLILHWNGNERYA 272

Query: 371 HLDKSPTLQSSSAP 412
           HLDKSP+L  +SAP
Sbjct: 273 HLDKSPSLPVASAP 286


>tpg|DAA58659.1| TPA: hypothetical protein ZEAMMB73_968311 [Zea mays]
          Length = 268

 Score =  199 bits (505), Expect = 3e-49
 Identities = 93/134 (69%), Positives = 111/134 (82%)
 Frame = +2

Query: 11  LENIYYFRVCSYTEQIALINYLGKFIKEQKNVKIVIVDSITFHFRQDFEDMALRTRXXXX 190
           L +IYYFR+CSYTEQIA+INY+ KF++E K+V+IVI+DS+TFHFRQDFED+ALRTR    
Sbjct: 113 LADIYYFRICSYTEQIAVINYMEKFLREHKDVRIVIIDSVTFHFRQDFEDLALRTRVLSG 172

Query: 191 XXXXXXXXXXDFRLAVVLLNQVTTKYSEGSVHLTLALGDSWSHACTNRVILHWNGNERYA 370
                      + LAVVLLNQVTTK++EGS  LTLALGDSWSH+CTNR+ILHWNGNERYA
Sbjct: 173 LSLKLMKIAKTYNLAVVLLNQVTTKFTEGSFQLTLALGDSWSHSCTNRLILHWNGNERYA 232

Query: 371 HLDKSPTLQSSSAP 412
           HLDKSP+L  +SAP
Sbjct: 233 HLDKSPSLPVASAP 246


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