BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030538
         (573 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285809.1| PREDICTED: tRNA modification GTPase MnmE [Vi...   171   6e-41
ref|XP_003638789.1| tRNA modification GTPase mnmE [Medicago trun...   166   2e-39
ref|XP_004140317.1| PREDICTED: tRNA modification GTPase MnmE-lik...   165   6e-39
ref|XP_002889172.1| hypothetical protein ARALYDRAFT_895691 [Arab...   161   6e-38
ref|XP_003522812.1| PREDICTED: tRNA modification GTPase MnmE-lik...   158   5e-37

>ref|XP_002285809.1| PREDICTED: tRNA modification GTPase MnmE [Vitis vinifera]
           gi|302141924|emb|CBI19127.3| unnamed protein product
           [Vitis vinifera]
          Length = 571

 Score =  171 bits (434), Expect = 6e-41
 Identities = 93/159 (58%), Positives = 111/159 (69%), Gaps = 9/159 (5%)
 Frame = -3

Query: 451 SFKPPNAH-FSTHH-TLKPRLCSNAAESTVVLNNDVRVGIDCANSDNPNADSSATIAAIV 278
           SF PP+   + TH  TL P L     ++T+VL  D R+G    N ++    S+ TIAAIV
Sbjct: 45  SFFPPSLKPYHTHSKTLVPHLHLTPNDTTLVLKKDERLGSRSVNQEHIEGTSTTTIAAIV 104

Query: 277 TSIGGPPGAVGIVRLSGPTAVAIASRVFSPGLKKK-------RDNWKPTSHFVEYGLVLD 119
           TS+GGPP AVGIVRLSGP AVAI +RVF P  + K         +W+PTSH VEYG+VLD
Sbjct: 105 TSLGGPPSAVGIVRLSGPEAVAIVARVFRPARRNKGKTLGSGSGSWRPTSHVVEYGVVLD 164

Query: 118 PDDNVVDEVLAVPMLAPKSYTREDVVELQCHGTEVCLHR 2
              NVVDEVLA+PMLAP+SYTREDVVELQCHG+EVCL R
Sbjct: 165 HHGNVVDEVLAIPMLAPRSYTREDVVELQCHGSEVCLRR 203


>ref|XP_003638789.1| tRNA modification GTPase mnmE [Medicago truncatula]
           gi|355504724|gb|AES85927.1| tRNA modification GTPase
           mnmE [Medicago truncatula]
          Length = 543

 Score =  166 bits (421), Expect = 2e-39
 Identities = 92/153 (60%), Positives = 108/153 (70%), Gaps = 4/153 (2%)
 Frame = -3

Query: 448 FKPPNAHFSTHHTLKPRLCSNAAES-TVVLNNDVRVGIDCANSDNPNAD---SSATIAAI 281
           F PP      H  L  R+ S+   S  V+ N D R+ ++   +DN N +   +S TIAAI
Sbjct: 25  FTPPPRTTWRHSLLSSRISSSTNYSYNVITNKDERL-LEQIENDNNNTNVVANSTTIAAI 83

Query: 280 VTSIGGPPGAVGIVRLSGPTAVAIASRVFSPGLKKKRDNWKPTSHFVEYGLVLDPDDNVV 101
           VTS+GGPP AVGIVRLSGP AV+IA RVF P     R+ W+PTSH VEYG+VLD D NVV
Sbjct: 84  VTSLGGPPAAVGIVRLSGPHAVSIAGRVFRPA----RNTWRPTSHVVEYGVVLDSDGNVV 139

Query: 100 DEVLAVPMLAPKSYTREDVVELQCHGTEVCLHR 2
           DEV+AVPMLAP+SYTREDVVELQCHG EVCL R
Sbjct: 140 DEVIAVPMLAPRSYTREDVVELQCHGNEVCLRR 172


>ref|XP_004140317.1| PREDICTED: tRNA modification GTPase MnmE-like [Cucumis sativus]
           gi|449526047|ref|XP_004170026.1| PREDICTED: tRNA
           modification GTPase MnmE-like [Cucumis sativus]
          Length = 561

 Score =  165 bits (417), Expect = 6e-39
 Identities = 91/165 (55%), Positives = 110/165 (66%), Gaps = 12/165 (7%)
 Frame = -3

Query: 460 FSLSFKPPNAHFS----THHTLKPRLC---SNAAESTVVLNNDVRVGIDCANSDNPNADS 302
           FS     P++ +S    ++H L   L    S   E+T VL  D R+G   A ++    D+
Sbjct: 28  FSTPISRPSSIYSISKTSNHVLSKSLIKSHSTGKENTFVLAPDERLGDSHAGTEREQIDN 87

Query: 301 SATIAAIVTSIGGPPGAVGIVRLSGPTAVAIASRVFSPGLKKKRDN-----WKPTSHFVE 137
           S+TIAAIVTSIGGPP AVGIVRLSGP AV I   +F P  KKK  N     W+PTSH VE
Sbjct: 88  SSTIAAIVTSIGGPPAAVGIVRLSGPRAVNIVGTLFFPAAKKKGKNLSLHPWRPTSHVVE 147

Query: 136 YGLVLDPDDNVVDEVLAVPMLAPKSYTREDVVELQCHGTEVCLHR 2
           YG+VLD   +V+DEVL VPMLAP+SYTREDV+ELQCHG+EVCL R
Sbjct: 148 YGVVLDQQGDVIDEVLTVPMLAPRSYTREDVIELQCHGSEVCLRR 192


>ref|XP_002889172.1| hypothetical protein ARALYDRAFT_895691 [Arabidopsis lyrata subsp.
           lyrata] gi|297335013|gb|EFH65431.1| hypothetical protein
           ARALYDRAFT_895691 [Arabidopsis lyrata subsp. lyrata]
          Length = 560

 Score =  161 bits (408), Expect = 6e-38
 Identities = 88/146 (60%), Positives = 104/146 (71%), Gaps = 10/146 (6%)
 Frame = -3

Query: 409 LKPRLCSNAAESTVVLNNDVRVG-----IDCANSDNPNADSSATIAAIVTSIGGPPGAVG 245
           LKPR  S+  +S V   ++  VG     +D A  +     SS+TI AIVT IGGPPGAVG
Sbjct: 50  LKPRAASSEDKSLVFRGDERVVGLVGKVVDDAFDNVDRFQSSSTIVAIVTPIGGPPGAVG 109

Query: 244 IVRLSGPTAVAIASRVFSPGLKKKR-----DNWKPTSHFVEYGLVLDPDDNVVDEVLAVP 80
           IVRLSGP AV +A RVF    K+K+     D+W+P SHFVEYG+V+D   NVVDEVLAVP
Sbjct: 110 IVRLSGPKAVEVARRVFRSAKKRKKKDSDSDSWQPKSHFVEYGVVVDSHGNVVDEVLAVP 169

Query: 79  MLAPKSYTREDVVELQCHGTEVCLHR 2
           MLAP+SYTREDVVELQCHG+EVCL R
Sbjct: 170 MLAPRSYTREDVVELQCHGSEVCLRR 195


>ref|XP_003522812.1| PREDICTED: tRNA modification GTPase MnmE-like [Glycine max]
          Length = 520

 Score =  158 bits (400), Expect = 5e-37
 Identities = 88/147 (59%), Positives = 99/147 (67%), Gaps = 9/147 (6%)
 Frame = -3

Query: 415 HTLKPRLCSNAAES--------TVVLNNDVRVGI-DCANSDNPNADSSATIAAIVTSIGG 263
           H L P   S   +S         +VL  D R+G  +C         S  TIAAIVTS+GG
Sbjct: 12  HCLIPSKASRTVKSRAGSENYNNLVLKKDERLGAGECVGE----VGSGTTIAAIVTSVGG 67

Query: 262 PPGAVGIVRLSGPTAVAIASRVFSPGLKKKRDNWKPTSHFVEYGLVLDPDDNVVDEVLAV 83
           PP AVGIVRLSGP AV+IA RVF P     R  W+PTSH VEYG+VLD D NV+DEVLAV
Sbjct: 68  PPAAVGIVRLSGPGAVSIAGRVFRPA----RKTWRPTSHVVEYGVVLDSDGNVIDEVLAV 123

Query: 82  PMLAPKSYTREDVVELQCHGTEVCLHR 2
           PMLAP+SYTREDVVELQCHG+EVCL R
Sbjct: 124 PMLAPRSYTREDVVELQCHGSEVCLRR 150