BLASTX nr result
ID: Bupleurum21_contig00030532
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00030532 (410 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI29957.3| unnamed protein product [Vitis vinifera] 93 2e-17 ref|XP_002281530.1| PREDICTED: 40S ribosomal protein S28-like [V... 93 3e-17 ref|XP_003520726.1| PREDICTED: 40S ribosomal protein S28-like [G... 90 2e-16 gb|AEC10961.1| ribosomal protein s28 [Camellia sinensis] 89 3e-16 ref|XP_004154925.1| PREDICTED: 40S ribosomal protein S28-like [C... 89 4e-16 >emb|CBI29957.3| unnamed protein product [Vitis vinifera] Length = 111 Score = 93.2 bits (230), Expect = 2e-17 Identities = 44/52 (84%), Positives = 48/52 (92%) Frame = -3 Query: 390 EMESGVKHAIVIKVIGRTGSRGQVTQVRVKFTDDSGRMIMRNVKGPVREGDI 235 +MESGVKHA+V+KV+GRTGSRGQVTQVRVKF DD R IMRNVKGPVREGDI Sbjct: 46 KMESGVKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDI 97 >ref|XP_002281530.1| PREDICTED: 40S ribosomal protein S28-like [Vitis vinifera] Length = 65 Score = 92.8 bits (229), Expect = 3e-17 Identities = 44/51 (86%), Positives = 47/51 (92%) Frame = -3 Query: 387 MESGVKHAIVIKVIGRTGSRGQVTQVRVKFTDDSGRMIMRNVKGPVREGDI 235 MESGVKHA+V+KV+GRTGSRGQVTQVRVKF DD R IMRNVKGPVREGDI Sbjct: 1 MESGVKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDI 51 >ref|XP_003520726.1| PREDICTED: 40S ribosomal protein S28-like [Glycine max] Length = 105 Score = 89.7 bits (221), Expect = 2e-16 Identities = 43/53 (81%), Positives = 47/53 (88%) Frame = -3 Query: 393 VEMESGVKHAIVIKVIGRTGSRGQVTQVRVKFTDDSGRMIMRNVKGPVREGDI 235 + MES VKHA+V+KV+GRTGSRGQVTQVRVKF DD R IMRNVKGPVREGDI Sbjct: 39 IRMESQVKHALVVKVMGRTGSRGQVTQVRVKFLDDQNRHIMRNVKGPVREGDI 91 >gb|AEC10961.1| ribosomal protein s28 [Camellia sinensis] Length = 65 Score = 89.4 bits (220), Expect = 3e-16 Identities = 42/51 (82%), Positives = 46/51 (90%) Frame = -3 Query: 387 MESGVKHAIVIKVIGRTGSRGQVTQVRVKFTDDSGRMIMRNVKGPVREGDI 235 MES +KHAIV+KV+GRTGSRGQVTQVRVKF DD R IMRNVKGPVREGD+ Sbjct: 1 MESQIKHAIVVKVMGRTGSRGQVTQVRVKFIDDQNRFIMRNVKGPVREGDV 51 >ref|XP_004154925.1| PREDICTED: 40S ribosomal protein S28-like [Cucumis sativus] Length = 68 Score = 89.0 bits (219), Expect = 4e-16 Identities = 42/51 (82%), Positives = 46/51 (90%) Frame = -3 Query: 387 MESGVKHAIVIKVIGRTGSRGQVTQVRVKFTDDSGRMIMRNVKGPVREGDI 235 MES +KHA+V+KV+GRTGSRGQVTQVRVKF DD R IMRNVKGPVREGDI Sbjct: 4 MESQIKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRYIMRNVKGPVREGDI 54