BLASTX nr result

ID: Bupleurum21_contig00030532 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030532
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29957.3| unnamed protein product [Vitis vinifera]               93   2e-17
ref|XP_002281530.1| PREDICTED: 40S ribosomal protein S28-like [V...    93   3e-17
ref|XP_003520726.1| PREDICTED: 40S ribosomal protein S28-like [G...    90   2e-16
gb|AEC10961.1| ribosomal protein s28 [Camellia sinensis]               89   3e-16
ref|XP_004154925.1| PREDICTED: 40S ribosomal protein S28-like [C...    89   4e-16

>emb|CBI29957.3| unnamed protein product [Vitis vinifera]
          Length = 111

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 44/52 (84%), Positives = 48/52 (92%)
 Frame = -3

Query: 390 EMESGVKHAIVIKVIGRTGSRGQVTQVRVKFTDDSGRMIMRNVKGPVREGDI 235
           +MESGVKHA+V+KV+GRTGSRGQVTQVRVKF DD  R IMRNVKGPVREGDI
Sbjct: 46  KMESGVKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDI 97


>ref|XP_002281530.1| PREDICTED: 40S ribosomal protein S28-like [Vitis vinifera]
          Length = 65

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 44/51 (86%), Positives = 47/51 (92%)
 Frame = -3

Query: 387 MESGVKHAIVIKVIGRTGSRGQVTQVRVKFTDDSGRMIMRNVKGPVREGDI 235
           MESGVKHA+V+KV+GRTGSRGQVTQVRVKF DD  R IMRNVKGPVREGDI
Sbjct: 1   MESGVKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDI 51


>ref|XP_003520726.1| PREDICTED: 40S ribosomal protein S28-like [Glycine max]
          Length = 105

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 43/53 (81%), Positives = 47/53 (88%)
 Frame = -3

Query: 393 VEMESGVKHAIVIKVIGRTGSRGQVTQVRVKFTDDSGRMIMRNVKGPVREGDI 235
           + MES VKHA+V+KV+GRTGSRGQVTQVRVKF DD  R IMRNVKGPVREGDI
Sbjct: 39  IRMESQVKHALVVKVMGRTGSRGQVTQVRVKFLDDQNRHIMRNVKGPVREGDI 91


>gb|AEC10961.1| ribosomal protein s28 [Camellia sinensis]
          Length = 65

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 42/51 (82%), Positives = 46/51 (90%)
 Frame = -3

Query: 387 MESGVKHAIVIKVIGRTGSRGQVTQVRVKFTDDSGRMIMRNVKGPVREGDI 235
           MES +KHAIV+KV+GRTGSRGQVTQVRVKF DD  R IMRNVKGPVREGD+
Sbjct: 1   MESQIKHAIVVKVMGRTGSRGQVTQVRVKFIDDQNRFIMRNVKGPVREGDV 51


>ref|XP_004154925.1| PREDICTED: 40S ribosomal protein S28-like [Cucumis sativus]
          Length = 68

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 42/51 (82%), Positives = 46/51 (90%)
 Frame = -3

Query: 387 MESGVKHAIVIKVIGRTGSRGQVTQVRVKFTDDSGRMIMRNVKGPVREGDI 235
           MES +KHA+V+KV+GRTGSRGQVTQVRVKF DD  R IMRNVKGPVREGDI
Sbjct: 4   MESQIKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRYIMRNVKGPVREGDI 54


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