BLASTX nr result

ID: Bupleurum21_contig00030530 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030530
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303631.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13
ref|XP_002271209.2| PREDICTED: uncharacterized protein LOC100255...    77   1e-12
emb|CBI34456.3| unnamed protein product [Vitis vinifera]               77   1e-12
ref|XP_002299490.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
ref|XP_002509929.1| Centromeric protein E, putative [Ricinus com...    75   4e-12

>ref|XP_002303631.1| predicted protein [Populus trichocarpa] gi|222841063|gb|EEE78610.1|
            predicted protein [Populus trichocarpa]
          Length = 1277

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 38/105 (36%), Positives = 72/105 (68%), Gaps = 1/105 (0%)
 Frame = -1

Query: 317  SKEMISLTSQVKSLQEELKSLQVEKNELCVQIEKSQRD-SKNLMTLKNQNSKLTAKVEDQ 141
            S ++++LT QV +L +EL SLQ EKN++ +Q+EK + + S+NL  ++NQ S+L +++ + 
Sbjct: 903  SAQIMALTEQVNNLHQELDSLQTEKNQMQLQLEKEKEEFSENLTEMENQKSELVSQIAEH 962

Query: 140  QKTLLERQAIMDKINEDQKQCEGKYVDTKSIALIFERKIEEAAQD 6
            ++ L E++    K+NE+ KQ EG + + K    + ERK+++ A++
Sbjct: 963  RRMLDEQEEAHKKLNEEHKQVEGWFQECKLSLAVAERKVQDMAEE 1007


>ref|XP_002271209.2| PREDICTED: uncharacterized protein LOC100255355 [Vitis vinifera]
          Length = 1420

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 40/112 (35%), Positives = 74/112 (66%), Gaps = 1/112 (0%)
 Frame = -1

Query: 338  EASRNAMSKEMISLTSQVKSLQEELKSLQVEKNELCVQIEKSQRDSKNLMT-LKNQNSKL 162
            E + N  S  +++LT++V SLQ E+ SL  EK++L ++I++ + +S   +T L+NQ  +L
Sbjct: 1057 EDTENEASARIVALTAEVNSLQVEMDSLHNEKSQLELEIQRHKEESSESLTELENQRMEL 1116

Query: 161  TAKVEDQQKTLLERQAIMDKINEDQKQCEGKYVDTKSIALIFERKIEEAAQD 6
            T+KVE+ Q+ L E++   +K+ E+ KQ EG + + K+   + ER++EE  ++
Sbjct: 1117 TSKVEEHQRMLREQEDAFNKLMEEYKQSEGLFHEFKNNLQVTERRLEEMEEE 1168



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 33/109 (30%), Positives = 57/109 (52%)
 Frame = -1

Query: 338 EASRNAMSKEMISLTSQVKSLQEELKSLQVEKNELCVQIEKSQRDSKNLMTLKNQNSKLT 159
           E   N    ++++LT+++ +LQ EL SLQ  K +L                 +NQN++L 
Sbjct: 253 EGGENDAYAQIMALTAEINTLQVELNSLQTSKTQL-----------------ENQNNELQ 295

Query: 158 AKVEDQQKTLLERQAIMDKINEDQKQCEGKYVDTKSIALIFERKIEEAA 12
             + +QQ+TL E+   ++++N+  KQ +G    T+      ERK+EE A
Sbjct: 296 TMIAEQQRTLQEQDDTINEMNQQCKQVKGLRRQTEMNLQATERKVEEIA 344


>emb|CBI34456.3| unnamed protein product [Vitis vinifera]
          Length = 868

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 39/112 (34%), Positives = 76/112 (67%), Gaps = 1/112 (0%)
 Frame = -1

Query: 338 EASRNAMSKEMISLTSQVKSLQEELKSLQVEKNELCVQIEKSQRDSKNLMT-LKNQNSKL 162
           E   +  + ++++LT+Q+ +LQ+EL SLQ EK++L ++I++ + +S   +T L+NQ  +L
Sbjct: 577 EDGASEATAQILALTTQLSALQQELHSLQNEKSQLELEIQRHKEESSESLTELENQRMEL 636

Query: 161 TAKVEDQQKTLLERQAIMDKINEDQKQCEGKYVDTKSIALIFERKIEEAAQD 6
           T+KVE+ Q+ L E++   +K+ E+ KQ EG + + K+   + ER++EE  ++
Sbjct: 637 TSKVEEHQRMLREQEDAFNKLMEEYKQSEGLFHEFKNNLQVTERRLEEMEEE 688


>ref|XP_002299490.1| predicted protein [Populus trichocarpa] gi|222846748|gb|EEE84295.1|
            predicted protein [Populus trichocarpa]
          Length = 1074

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 41/108 (37%), Positives = 69/108 (63%), Gaps = 1/108 (0%)
 Frame = -1

Query: 326  NAMSKEMISLTSQVKSLQEELKSLQVEKNELCVQIEKSQRD-SKNLMTLKNQNSKLTAKV 150
            N  S ++++LT QV +LQ+ L SL+ EKN+   Q EK + + S+ L  L+NQ S+  +++
Sbjct: 697  NEASAQIMALTEQVSNLQQGLDSLRTEKNQTQSQFEKEREEFSEKLTELENQKSEFMSQI 756

Query: 149  EDQQKTLLERQAIMDKINEDQKQCEGKYVDTKSIALIFERKIEEAAQD 6
             +QQ+ L E++    K+NE+ KQ EG + + K    + ERKIE+ A++
Sbjct: 757  AEQQRMLDEQEEARKKLNEEHKQVEGWFQECKVSLEVAERKIEDMAEE 804


>ref|XP_002509929.1| Centromeric protein E, putative [Ricinus communis]
            gi|223549828|gb|EEF51316.1| Centromeric protein E,
            putative [Ricinus communis]
          Length = 1718

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 40/101 (39%), Positives = 68/101 (67%), Gaps = 1/101 (0%)
 Frame = -1

Query: 317  SKEMISLTSQVKSLQEELKSLQVEKNELCVQIEKSQRDSKNLMT-LKNQNSKLTAKVEDQ 141
            S ++++LT+Q  SLQ EL SLQ EKNEL +Q+EK ++D+  ++  ++N+ ++L +++ DQ
Sbjct: 1348 SAKIMTLTAQANSLQLELDSLQAEKNELQLQLEKEKQDNLGILAQMENEKTELMSRITDQ 1407

Query: 140  QKTLLERQAIMDKINEDQKQCEGKYVDTKSIALIFERKIEE 18
            QK L E++  + K +E+ KQ E  + + K      ERK+EE
Sbjct: 1408 QKVLEEKEDTVRKFSEEFKQVEHWFEECKGNLEASERKVEE 1448


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