BLASTX nr result

ID: Bupleurum21_contig00030522 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030522
         (543 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274927.1| PREDICTED: uncharacterized protein LOC100254...   141   6e-32
ref|XP_002328952.1| predicted protein [Populus trichocarpa] gi|2...   124   9e-27
ref|XP_004137270.1| PREDICTED: uncharacterized protein LOC101221...   122   5e-26
ref|XP_002520007.1| conserved hypothetical protein [Ricinus comm...   117   9e-25
ref|XP_002325377.1| predicted protein [Populus trichocarpa] gi|2...   108   4e-22

>ref|XP_002274927.1| PREDICTED: uncharacterized protein LOC100254467 [Vitis vinifera]
          Length = 838

 Score =  141 bits (356), Expect = 6e-32
 Identities = 87/190 (45%), Positives = 112/190 (58%), Gaps = 10/190 (5%)
 Frame = +3

Query: 3    MISLMSKFNGQAIKGHPVQIEAIDNGSXXXXXXXXXXX----FNKDHDTAPPPVWSTARR 170
            +ISLMS+ N ++I GHP+QIEA+++GS               F+ D + A PPVW TARR
Sbjct: 619  IISLMSRLNDKSIVGHPIQIEALEDGSSEMLLSSNEDFGNDVFDNDRNRAIPPVWRTARR 678

Query: 171  TVKCRVPRPCSPSTIDEDKG-EQLQHVHQDRKAPLNNLNGRILKHKMSFVRKNSSH---- 335
            T   RVPRP   S +D D+  E L  + Q RK+     N     HK S +RK+  H    
Sbjct: 679  TANFRVPRPHPSSALDGDEAVEDLPFLDQGRKSTYKKSNAGNSGHKGSIMRKSLPHIPRP 738

Query: 336  SSHRKYLKKPIKKTSAACNQKTRTLSSIATQQKHNNHLKHGFDSNHVNGLIKTESV-PPA 512
             + RK+ +K  K  S + +QKTRTLSSIA +QKH N  KH   S  ++GLIK ES  P A
Sbjct: 739  PTDRKFPRKMPKMVSLSSSQKTRTLSSIAIEQKHGNRPKHDSHSYKMDGLIKQESSGPTA 798

Query: 513  VACIPIKLVY 542
            VACIPIKLV+
Sbjct: 799  VACIPIKLVF 808


>ref|XP_002328952.1| predicted protein [Populus trichocarpa] gi|222839186|gb|EEE77537.1|
            predicted protein [Populus trichocarpa]
          Length = 775

 Score =  124 bits (311), Expect = 9e-27
 Identities = 79/190 (41%), Positives = 108/190 (56%), Gaps = 10/190 (5%)
 Frame = +3

Query: 3    MISLMSKFNGQAIKGHPVQIEAIDNGSXXXXXXXXXXXFNK--DHD--TAPPPVWSTARR 170
            ++SL+SKF+G+AI GHP+ IEA+++GS            N+  DHD  T+ PP W TARR
Sbjct: 557  IVSLISKFDGKAIIGHPILIEAVEDGSSETYFPLNDYYSNEAVDHDESTSLPPAWRTARR 616

Query: 171  TVKCRVPRPCSPSTIDEDKG-EQLQHVHQDRKAPLNNLNGRILKHKMSFVRKNSSH---- 335
            T   RVPRP   S +  D G E +  + Q+R  P    +     +K + VRK+  H    
Sbjct: 617  T-NSRVPRPHLSSVLGVDAGAEDIPFMDQERTVPFRKSSAGSFSYKANLVRKSLPHISRS 675

Query: 336  SSHRKYLKKPIKKTSAACNQKTRTLSSIATQQKHNNHLKHGFDSNHVNGLIKTE-SVPPA 512
            S+ +K  +K  KK S   NQKTRTLSSI  +Q   +   H   +  ++GLIK E S P  
Sbjct: 676  SADKKLPRKLPKKVSLPSNQKTRTLSSIGIKQNSVSKPMHDTSNGQMDGLIKPETSAPTT 735

Query: 513  VACIPIKLVY 542
            VACIP+KLV+
Sbjct: 736  VACIPVKLVF 745


>ref|XP_004137270.1| PREDICTED: uncharacterized protein LOC101221045 [Cucumis sativus]
          Length = 735

 Score =  122 bits (305), Expect = 5e-26
 Identities = 76/183 (41%), Positives = 99/183 (54%), Gaps = 3/183 (1%)
 Frame = +3

Query: 3    MISLMSKFNGQAIKGHPVQIEAIDNGSXXXXXXXXXXXFNKDHD--TAPPPVWSTARRTV 176
            ++SLMSK NGQAI GHP+QIE +++G               ++D  TA  P W TARRT 
Sbjct: 527  IVSLMSKLNGQAIIGHPIQIETLEDGFSETILSDSLGNAPSENDGSTALQPAWRTARRTA 586

Query: 177  KCRVPRPCSPSTIDEDKGEQLQHVHQDRKAPLNNLNGRILKHKMSFVRKNSSHSSHRKYL 356
              R+PRP  P+      GE+  +  Q+RK+ L  +   +   K          S+ R+  
Sbjct: 587  NVRIPRPHLPTV---PVGEEAGYDSQERKSRLKKVKTGVYLSKAGQPHIPRGPSNDRRLP 643

Query: 357  KKPIKKTSAACNQKTRTLSSIATQQKHNNHLKHGFDSNHVNGLIKTESV-PPAVACIPIK 533
            KK  KK S + NQKTRTLSSI  +Q   N   H   S  +NG IK ES  PP VACIP+K
Sbjct: 644  KKMAKKVSLSSNQKTRTLSSIDVEQNFGNMPIHDSVSCQINGSIKPESSGPPTVACIPVK 703

Query: 534  LVY 542
            LV+
Sbjct: 704  LVF 706


>ref|XP_002520007.1| conserved hypothetical protein [Ricinus communis]
            gi|223540771|gb|EEF42331.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 757

 Score =  117 bits (294), Expect = 9e-25
 Identities = 79/189 (41%), Positives = 105/189 (55%), Gaps = 9/189 (4%)
 Frame = +3

Query: 3    MISLMSKFNGQAIKGHPVQIEAIDNGSXXXXXXXXXXXFNK----DHDTAPPPVWSTARR 170
            ++SLMSK NG+AI GHP+QIEA+++GS            N+    D + + PP W TARR
Sbjct: 548  IVSLMSKLNGKAIIGHPIQIEALEDGSSEAVISTNDYCSNEAVDYDGNASLPPAWRTARR 607

Query: 171  TVKCRVPRPCSPSTIDEDKGEQLQHVHQDRKAPLNNLNGRILKHKMSFVRKNSSHSS--- 341
            T   RVPRP   S +  D+   + H   D++       GR+   K S  RK+  H S   
Sbjct: 608  T-NFRVPRPHLSSVLG-DEDVAVDHAFVDQE-------GRLPFKKSSVSRKSVPHISWPP 658

Query: 342  -HRKYLKKPIKKTSAACNQKTRTLSSIATQQKHNNHLKHGFDSNHVNGLIKTESV-PPAV 515
              RK+ +K  KK S + NQKTRTLSSIA QQ       H    + ++GLIK E+  P  V
Sbjct: 659  MDRKFPRKLSKKASLSSNQKTRTLSSIAVQQSFGAKTLHYTSGSQMDGLIKPETAGPTTV 718

Query: 516  ACIPIKLVY 542
            ACIP+KLV+
Sbjct: 719  ACIPVKLVF 727


>ref|XP_002325377.1| predicted protein [Populus trichocarpa] gi|222862252|gb|EEE99758.1|
           predicted protein [Populus trichocarpa]
          Length = 391

 Score =  108 bits (271), Expect = 4e-22
 Identities = 72/196 (36%), Positives = 104/196 (53%), Gaps = 16/196 (8%)
 Frame = +3

Query: 3   MISLMSKFNGQAIKGHPVQIEAIDNGS----------XXXXXXXXXXXFNKDHDTAPPPV 152
           ++SL+SKF+G+AI GHP+ IEA+++GS                      ++D  T+  P 
Sbjct: 167 IVSLISKFDGKAIIGHPIPIEAVEDGSSETQFPLNDQFPLNDYYSNEAVDQDESTSLQPA 226

Query: 153 WSTARRTVKCRVPRPCSPSTIDED-KGEQLQHVHQDRKAPLNNLNGRILKHKMSFVRKNS 329
           W TARRT   RVPRP   S    D   E +Q + Q+++ P    +G    +K +  RK+ 
Sbjct: 227 WRTARRT-NSRVPRPHLLSLSGFDAAAEDIQFMDQEKRVPFRKSSGGSFSYKANLARKSL 285

Query: 330 SH----SSHRKYLKKPIKKTSAACNQKTRTLSSIATQQKHNNHLKHGFDSNHVNGLIKTE 497
            H    S+ +K+ +K  KK S   NQKTRTLSSI  +Q    +      +  ++GLIK E
Sbjct: 286 PHVPQPSAQKKFPRKMPKKVSLPSNQKTRTLSSIGIKQIFVRNPVQDTGNGKMDGLIKPE 345

Query: 498 -SVPPAVACIPIKLVY 542
            S P  VACIP+KL +
Sbjct: 346 TSGPTTVACIPVKLAF 361


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