BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030509
         (431 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN63320.1| hypothetical protein VITISV_026425 [Vitis vinifera]   115   4e-24
ref|XP_003631786.1| PREDICTED: pentatricopeptide repeat-containi...   112   2e-23
gb|ACU25633.1| pentatricopeptide repeat-containing protein [Pitr...    60   2e-07
gb|ACU25634.1| pentatricopeptide repeat-containing protein [Priv...    58   7e-07
gb|ACU25621.1| pentatricopeptide repeat-containing protein [June...    58   9e-07

>emb|CAN63320.1| hypothetical protein VITISV_026425 [Vitis vinifera]
          Length = 722

 Score =  115 bits (288), Expect = 4e-24
 Identities = 62/144 (43%), Positives = 85/144 (59%), Gaps = 1/144 (0%)
 Frame = +3

Query: 3   FNNLKRFGYSLDSTTHITLIHAYRDERNHLAVSQFFIDMLKQKIKPDAATCESFFAGFDG 182
           F   +  GY  ++T++  LIHA   E N   V Q   DM   ++KPDA T  SF  G   
Sbjct: 561 FREFRNTGYFPNTTSYNILIHASIREGNDSLVEQLLRDMYSWRLKPDAVTYGSFIKGLCK 620

Query: 183 EDKILVTLQVQDQMREVGVTPNIYIWNAILEALLEGGKLWEIVWLLKEIT-DQCEANRIY 359
           E KI V +Q++DQM E G+TP + I+N IL A+ + GK W+IV LLK++T D CE N + 
Sbjct: 621 EGKISVAIQLRDQMLESGLTPTVTIYNTILAAMFQRGKFWDIVSLLKDMTMDGCEPNAVS 680

Query: 360 LGILNEAMPEGWTKGFPRAVKHME 431
           + IL +AM + W K FP   K +E
Sbjct: 681 IEILKQAMSKCWMKRFPEVSKQLE 704


>ref|XP_003631786.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Vitis vinifera]
          Length = 629

 Score =  112 bits (281), Expect = 2e-23
 Identities = 61/141 (43%), Positives = 84/141 (59%), Gaps = 1/141 (0%)
 Frame = +3

Query: 3   FNNLKRFGYSLDSTTHITLIHAYRDERNHLAVSQFFIDMLKQKIKPDAATCESFFAGFDG 182
           F   +  GY  ++T++  LIHA   E N   V Q   DM   ++KPDA T  SF  G   
Sbjct: 453 FREFRNTGYFPNTTSYNILIHASIREGNDSLVEQLLRDMYSWRLKPDAVTYGSFIKGLCK 512

Query: 183 EDKILVTLQVQDQMREVGVTPNIYIWNAILEALLEGGKLWEIVWLLKEIT-DQCEANRIY 359
           E KI V +Q++DQM E G+TP I I+N IL A+ + GK W+IV LLK++T D CE N + 
Sbjct: 513 EGKISVAIQLRDQMLESGLTPTITIYNTILAAMFQRGKFWDIVSLLKDMTMDGCEPNAVS 572

Query: 360 LGILNEAMPEGWTKGFPRAVK 422
           + IL +AM + W K FP  ++
Sbjct: 573 IEILKQAMSKCWMKRFPEFIE 593


>gb|ACU25633.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
          Length = 481

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 34/133 (25%), Positives = 69/133 (51%), Gaps = 3/133 (2%)
 Frame = +3

Query: 3   FNNLKRFGYSLDSTTHITLIHAYRDERNHLAVSQFFIDMLKQKIKPDAATCESFFAGFDG 182
           F +LK    + D  T+ T+I+ Y   +      ++F++M ++KI P   T  +   G+  
Sbjct: 173 FEDLKSREITPDVVTYNTMINGYTRVKKMEEAEKYFLEMKEKKIDPTVVTYTTLIKGYAS 232

Query: 183 EDKILVTLQVQDQMREVGVTPNIYIWNAILEALLEGGKLWEIVWLLKEITDQCEA---NR 353
            D++   L++ ++M+ +G+ PN   ++ +L  L +  K+ E   LLKE+ D+  A   N 
Sbjct: 233 IDRVDDALRLVEEMKGLGIKPNAITYSTLLPGLCDAEKMSEARSLLKEMVDKYIAPKDNS 292

Query: 354 IYLGILNEAMPEG 392
           I++ +++     G
Sbjct: 293 IFIRLISSQCKAG 305


>gb|ACU25634.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
          Length = 484

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 32/133 (24%), Positives = 68/133 (51%), Gaps = 3/133 (2%)
 Frame = +3

Query: 3   FNNLKRFGYSLDSTTHITLIHAYRDERNHLAVSQFFIDMLKQKIKPDAATCESFFAGFDG 182
           F ++K    + D  T+ T+I+ Y   +      ++F++M ++KI P   T  +   G+  
Sbjct: 173 FEDMKSREITPDVITYNTMINGYNRVKKMEEAEKYFLEMKERKIDPTVVTYTTLIKGYAS 232

Query: 183 EDKILVTLQVQDQMREVGVTPNIYIWNAILEALLEGGKLWEIVWLLKEITDQCEA---NR 353
            D++   L++ ++M+ +G+ PN   ++ +L  L    K+ E   +LKE+ D+  A   N 
Sbjct: 233 VDRVDDALRLVEEMKGLGIKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYVAPTDNS 292

Query: 354 IYLGILNEAMPEG 392
           I++ +++     G
Sbjct: 293 IFMRLISSQCKAG 305


>gb|ACU25621.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
          Length = 484

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 33/133 (24%), Positives = 67/133 (50%), Gaps = 3/133 (2%)
 Frame = +3

Query: 3   FNNLKRFGYSLDSTTHITLIHAYRDERNHLAVSQFFIDMLKQKIKPDAATCESFFAGFDG 182
           F ++K    S D  T+ T+I+ Y   +      ++F++M  + I+P   T  +   G+  
Sbjct: 173 FEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVS 232

Query: 183 EDKILVTLQVQDQMREVGVTPNIYIWNAILEALLEGGKLWEIVWLLKEITDQCEA---NR 353
            D++   L++ ++M+  G+ PN   ++ +L  L   GK+ E   +LKE+ D+  A   N 
Sbjct: 233 VDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAGKMIEARSILKEMMDKYLAPTDNS 292

Query: 354 IYLGILNEAMPEG 392
           I++ +++     G
Sbjct: 293 IFMRLISSQCNSG 305