BLASTX nr result

ID: Bupleurum21_contig00030505 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030505
         (693 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303315.1| predicted protein [Populus trichocarpa] gi|2...    73   5e-11
ref|XP_002298246.1| predicted protein [Populus trichocarpa] gi|2...    57   5e-06

>ref|XP_002303315.1| predicted protein [Populus trichocarpa] gi|222840747|gb|EEE78294.1|
           predicted protein [Populus trichocarpa]
          Length = 338

 Score = 73.2 bits (178), Expect = 5e-11
 Identities = 61/199 (30%), Positives = 86/199 (43%), Gaps = 3/199 (1%)
 Frame = -2

Query: 590 EGFSRREDVHPHLLQLYHNHKH---VNTTTPTISEVKKLELRLAPPGDDHQEDTYTHCNN 420
           EG S+  +  P LL L    +          + SE +KLELRL PPG+D    + ++   
Sbjct: 2   EGCSKNVEACPQLLDLIPKEREWLGKGEDERSSSEDRKLELRLGPPGEDWSLKSTSN--- 58

Query: 419 IPKTKFQEKHHDPSLLSLGNSSFTNTNHTTCAGSKRGLDNYCWLDESQAHKFXXXXXXXX 240
               + + + H   LLS G   FTN N  T        +++ W ++ Q  K         
Sbjct: 59  ----RERRERHKSQLLSFGY--FTNGNQQTHKFPSSAENSHVWFNKKQQGKVPPSYLNFP 112

Query: 239 XXXXXXXSQYYHDHHQEDLLSVTGNELSPKCCSKGMVAELKNTQKQDAFLPDACAVNKTD 60
                  +        +  L V   E S  CC+K +V EL    ++ AF   A A   T 
Sbjct: 113 SSSTPPTATA-----TQQSLPVMDKESSQPCCTK-VVVELPQCAEKKAFSTPAPA--NTA 164

Query: 59  APNTSQKRTSPAPVVGWPP 3
            PN+SQKR +P PVVGWPP
Sbjct: 165 VPNSSQKRIAPGPVVGWPP 183


>ref|XP_002298246.1| predicted protein [Populus trichocarpa] gi|222845504|gb|EEE83051.1|
           predicted protein [Populus trichocarpa]
          Length = 171

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 55/190 (28%), Positives = 80/190 (42%), Gaps = 3/190 (1%)
 Frame = -2

Query: 590 EGFSRREDVHPHLLQLYHNHKH---VNTTTPTISEVKKLELRLAPPGDDHQEDTYTHCNN 420
           EG S+  +  P LL L    +          + SE KKLELRL PPG+D          +
Sbjct: 2   EGCSKNVEACPRLLDLIPKEREWLGKREDERSSSEEKKLELRLGPPGEDW---------S 52

Query: 419 IPKTKFQEKHHDPSLLSLGNSSFTNTNHTTCAGSKRGLDNYCWLDESQAHKFXXXXXXXX 240
           +  T  +E+ H+  L S G   FTN N  T        +++ W ++ Q  +         
Sbjct: 53  LKNTSNRER-HESQLNSFG--YFTNGNQQTHKFPSSAENSHVWFNQQQQGQVAPPFLKFP 109

Query: 239 XXXXXXXSQYYHDHHQEDLLSVTGNELSPKCCSKGMVAELKNTQKQDAFLPDACAVNKTD 60
                  +        +  L +   E S  CC+K +V EL+   ++ AF P A A   T 
Sbjct: 110 SSSTPPAAT-----ASQQSLPIMAKESSQPCCTKAVV-ELQQCAEKKAFSPPAPA--NTA 161

Query: 59  APNTSQKRTS 30
            PN+SQKR S
Sbjct: 162 VPNSSQKRYS 171


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