BLASTX nr result

ID: Bupleurum21_contig00030483 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030483
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37462.3| unnamed protein product [Vitis vinifera]              194   5e-48
ref|XP_002263624.1| PREDICTED: pentatricopeptide repeat-containi...   194   5e-48
emb|CAN70810.1| hypothetical protein VITISV_034914 [Vitis vinifera]   194   6e-48
ref|XP_003534115.1| PREDICTED: pentatricopeptide repeat-containi...   186   1e-45
ref|XP_002521864.1| pentatricopeptide repeat-containing protein,...   184   8e-45

>emb|CBI37462.3| unnamed protein product [Vitis vinifera]
          Length = 673

 Score =  194 bits (494), Expect = 5e-48
 Identities = 89/120 (74%), Positives = 102/120 (85%)
 Frame = -1

Query: 361 LKLYKKMSEVRCTPSIQTFNMLIAMYFEMGDPDGAFECWNEMEKRGYIADTDSYCVMIEG 182
           L LY +M E  C PS+ TFNMLI+M+FE+G+PDGAFE W+EM+KRG   DTD+YCVMIEG
Sbjct: 536 LGLYGRMIEAGCVPSVHTFNMLISMFFEIGEPDGAFETWHEMDKRGCARDTDTYCVMIEG 595

Query: 181 LFGCNKTNDACVLLEEVVNKGLKLPYRKFDSFLIQLSSIGDLQGIHKLSDHMRKFYNPAM 2
           LF CNK  DAC LL+EVVNKG+KLPYRKFD FL+QLS IGDLQ IHKLS+HMRKFYNPAM
Sbjct: 596 LFNCNKMEDACFLLDEVVNKGIKLPYRKFDCFLMQLSMIGDLQAIHKLSEHMRKFYNPAM 655


>ref|XP_002263624.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
           mitochondrial-like [Vitis vinifera]
          Length = 709

 Score =  194 bits (494), Expect = 5e-48
 Identities = 89/120 (74%), Positives = 102/120 (85%)
 Frame = -1

Query: 361 LKLYKKMSEVRCTPSIQTFNMLIAMYFEMGDPDGAFECWNEMEKRGYIADTDSYCVMIEG 182
           L LY +M E  C PS+ TFNMLI+M+FE+G+PDGAFE W+EM+KRG   DTD+YCVMIEG
Sbjct: 572 LGLYGRMIEAGCVPSVHTFNMLISMFFEIGEPDGAFETWHEMDKRGCARDTDTYCVMIEG 631

Query: 181 LFGCNKTNDACVLLEEVVNKGLKLPYRKFDSFLIQLSSIGDLQGIHKLSDHMRKFYNPAM 2
           LF CNK  DAC LL+EVVNKG+KLPYRKFD FL+QLS IGDLQ IHKLS+HMRKFYNPAM
Sbjct: 632 LFNCNKMEDACFLLDEVVNKGIKLPYRKFDCFLMQLSMIGDLQAIHKLSEHMRKFYNPAM 691


>emb|CAN70810.1| hypothetical protein VITISV_034914 [Vitis vinifera]
          Length = 708

 Score =  194 bits (493), Expect = 6e-48
 Identities = 88/120 (73%), Positives = 102/120 (85%)
 Frame = -1

Query: 361 LKLYKKMSEVRCTPSIQTFNMLIAMYFEMGDPDGAFECWNEMEKRGYIADTDSYCVMIEG 182
           L LY +M E  C PS+ TFNMLI+M+FE+G+PDGAFE W+EM+KRG   DTD+YCVMIEG
Sbjct: 545 LGLYGRMIEAGCVPSVHTFNMLISMFFEIGEPDGAFETWHEMDKRGCARDTDTYCVMIEG 604

Query: 181 LFGCNKTNDACVLLEEVVNKGLKLPYRKFDSFLIQLSSIGDLQGIHKLSDHMRKFYNPAM 2
           LF CNK  DAC LL+EV+NKG+KLPYRKFD FL+QLS IGDLQ IHKLS+HMRKFYNPAM
Sbjct: 605 LFNCNKMEDACFLLDEVINKGIKLPYRKFDCFLMQLSMIGDLQAIHKLSEHMRKFYNPAM 664


>ref|XP_003534115.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
           mitochondrial-like [Glycine max]
          Length = 466

 Score =  186 bits (473), Expect = 1e-45
 Identities = 84/120 (70%), Positives = 101/120 (84%)
 Frame = -1

Query: 361 LKLYKKMSEVRCTPSIQTFNMLIAMYFEMGDPDGAFECWNEMEKRGYIADTDSYCVMIEG 182
           LKLY +M E+ C PS+QT+NMLI+M+FEM DPDGAFE W E++ RG   DTD+YCVMIEG
Sbjct: 329 LKLYGRMIELNCIPSVQTYNMLISMFFEMDDPDGAFETWQEIDNRGCRPDTDTYCVMIEG 388

Query: 181 LFGCNKTNDACVLLEEVVNKGLKLPYRKFDSFLIQLSSIGDLQGIHKLSDHMRKFYNPAM 2
           LF CNK  DAC LLEEV+N+G+KLPY+KFDSFL+QLS IGDLQ IH+LS+HM+KFYN  M
Sbjct: 389 LFNCNKMEDACFLLEEVINEGVKLPYKKFDSFLMQLSVIGDLQAIHRLSEHMKKFYNHGM 448


>ref|XP_002521864.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538902|gb|EEF40500.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 428

 Score =  184 bits (466), Expect = 8e-45
 Identities = 82/120 (68%), Positives = 102/120 (85%)
 Frame = -1

Query: 361 LKLYKKMSEVRCTPSIQTFNMLIAMYFEMGDPDGAFECWNEMEKRGYIADTDSYCVMIEG 182
           L+LY +M EV C PS+QT+NMLI+MYFEMGDPDGAF+ W+EM  RG   D D+Y VMI+G
Sbjct: 288 LRLYGRMIEVDCLPSVQTYNMLISMYFEMGDPDGAFDTWDEMHNRGCAKDIDTYSVMIDG 347

Query: 181 LFGCNKTNDACVLLEEVVNKGLKLPYRKFDSFLIQLSSIGDLQGIHKLSDHMRKFYNPAM 2
           LFGCNK  DAC+L+E+V+ KG+KLPY+KFDSFL++LS IGDLQ IHKLS+HMRK+YN +M
Sbjct: 348 LFGCNKVQDACLLIEDVMTKGMKLPYQKFDSFLMKLSEIGDLQTIHKLSEHMRKYYNSSM 407


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