BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030478
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004164344.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...    64   2e-08
ref|XP_004147701.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...    64   2e-08
ref|XP_002876296.1| RNA recognition motif-containing protein [Ar...    54   1e-05

>ref|XP_004164344.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Cucumis
           sativus]
          Length = 432

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 28/32 (87%), Positives = 29/32 (90%)
 Frame = -1

Query: 250 GKIRRRTCYECGEKGHLSSLCPNKQPADSIKS 155
           GKIRRRTCYECGEKGHLSS CPNKQ ADS+ S
Sbjct: 401 GKIRRRTCYECGEKGHLSSNCPNKQLADSVTS 432


>ref|XP_004147701.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Cucumis
           sativus]
          Length = 432

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 28/32 (87%), Positives = 29/32 (90%)
 Frame = -1

Query: 250 GKIRRRTCYECGEKGHLSSLCPNKQPADSIKS 155
           GKIRRRTCYECGEKGHLSS CPNKQ ADS+ S
Sbjct: 401 GKIRRRTCYECGEKGHLSSNCPNKQLADSVTS 432


>ref|XP_002876296.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
           lyrata] gi|297322134|gb|EFH52555.1| RNA recognition
           motif-containing protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 599

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 21/103 (20%)
 Frame = -1

Query: 250 GKIRRRTCYECGEKGHLSSLCPNKQPADSIKSVPASKNAYTVEA-----TTYEIPVRRLN 86
           GK++RR CYECGEKGHLS+ CP K    +     +     TVEA     T+Y +  +  +
Sbjct: 476 GKVKRRNCYECGEKGHLSTACPKK--LQNTAHTNSQLEHQTVEAGPVQVTSYSLQTKTRD 533

Query: 85  AEANIVSF----------------EANNVTVDTSTVSGKIRRR 5
            E N  SF                 AN+ ++ ++  +GKI++R
Sbjct: 534 TENNGGSFMDETYATVPISVDVTNGANDASLTSAVSTGKIKKR 576