BLASTX nr result

ID: Bupleurum21_contig00030452 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030452
         (920 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303120.1| predicted protein [Populus trichocarpa] gi|2...   236   4e-60
ref|XP_002526570.1| brca1 associated ring domain, putative [Rici...   235   1e-59
ref|XP_004163582.1| PREDICTED: protein BREAST CANCER SUSCEPTIBIL...   216   5e-54
ref|XP_004151994.1| PREDICTED: protein BREAST CANCER SUSCEPTIBIL...   213   4e-53
ref|XP_003520608.1| PREDICTED: protein BREAST CANCER SUSCEPTIBIL...   203   5e-50

>ref|XP_002303120.1| predicted protein [Populus trichocarpa] gi|222844846|gb|EEE82393.1|
           predicted protein [Populus trichocarpa]
          Length = 380

 Score =  236 bits (603), Expect = 4e-60
 Identities = 120/238 (50%), Positives = 158/238 (66%), Gaps = 3/238 (1%)
 Frame = -2

Query: 910 SELSPKQSEFWSTLSHGAKTWVFCGSALSSMDLCYMVKFASNCGATVAKFWRPDVTHVIT 731
           + ++P+QS FW    +GAK WVFCGSALSS + C +VKF S  G  V KFW  +VTHVI 
Sbjct: 143 TSVAPQQSNFWVGSCNGAKKWVFCGSALSSEEKCLLVKFGSMIGVPVNKFWASNVTHVIA 202

Query: 730 TTNANGACTRTMKVLMAILHGRWIVSMDWIKSCAAANRPLDEKHYEIALDNHGARDGPKT 551
            T+++GACTRT+K LMAIL+G+W++++DWIK+C  +  P+DE++YEI LD HG+RDGPK 
Sbjct: 203 ATDSDGACTRTLKYLMAILNGKWVLTIDWIKACMESMHPVDEENYEIILDCHGSRDGPKN 262

Query: 550 GRYLALNNGPKLFGNLVFYFSGDXXXXXXXXXXXXXXXAGGTSVEKKELLVPQSCDIDGT 371
           GR  ALNN PKLF  L F F GD               AGGT ++ +E LV Q  +    
Sbjct: 263 GRLSALNNAPKLFSGLSFCFVGDFVAGYKEGLQSLVIAAGGTLLKSEEELVEQRHEPLSP 322

Query: 370 SRTLIVYKADQ---CTSGDKDCYVLEIPKEAQDLALRIGSRVIQHTWILESIAACKLQ 206
           S TLIVY  D    C  G++   + +   EAQDLA ++GS+VI HTW+LESI++ KLQ
Sbjct: 323 STTLIVYNLDPPQGCKLGEEVSIIWQRTNEAQDLAAKVGSQVIGHTWLLESISSYKLQ 380


>ref|XP_002526570.1| brca1 associated ring domain, putative [Ricinus communis]
            gi|223534131|gb|EEF35848.1| brca1 associated ring domain,
            putative [Ricinus communis]
          Length = 744

 Score =  235 bits (599), Expect = 1e-59
 Identities = 115/239 (48%), Positives = 158/239 (66%), Gaps = 3/239 (1%)
 Frame = -2

Query: 910  SELSPKQSEFWSTLSHGAKTWVFCGSALSSMDLCYMVKFASNCGATVAKFWRPDVTHVIT 731
            +++ P+Q  FW+  + GAK WVFCGSALSS +   +++F    G  V KFW+P+VTHVI 
Sbjct: 491  TQVPPQQPNFWAESATGAKEWVFCGSALSSEEKSLLIEFGRMIGVPVTKFWQPNVTHVIA 550

Query: 730  TTNANGACTRTMKVLMAILHGRWIVSMDWIKSCAAANRPLDEKHYEIALDNHGARDGPKT 551
             T+  GACTRT+KVLMAIL+GRW++++DW+K+C  +   +DE+ YE++LDNHG   GP+T
Sbjct: 551  ATDTKGACTRTLKVLMAILNGRWVLTIDWVKACMRSMHYVDEEPYEVSLDNHGCHSGPRT 610

Query: 550  GRYLALNNGPKLFGNLVFYFSGDXXXXXXXXXXXXXXXAGGTSVEKKELLVPQSCDIDGT 371
            GR   L+N PKLF  L FYF+GD               AGGT ++ KE +V QS +    
Sbjct: 611  GRLSVLDNAPKLFSGLNFYFAGDFVSGYKEDLQNLVLAAGGTILDSKEKVVEQSHNEATP 670

Query: 370  SRTLIVYKADQ---CTSGDKDCYVLEIPKEAQDLALRIGSRVIQHTWILESIAACKLQP 203
            SRTL+VY  D    C  G++   + +   EA+DLA +IGS+VI HTW+LESIA+ K QP
Sbjct: 671  SRTLVVYNFDPPLGCKLGEEVTILWQRLSEAEDLAAKIGSQVIAHTWLLESIASYKFQP 729


>ref|XP_004163582.1| PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 1 homolog [Cucumis
            sativus]
          Length = 679

 Score =  216 bits (551), Expect = 5e-54
 Identities = 114/243 (46%), Positives = 150/243 (61%), Gaps = 4/243 (1%)
 Frame = -2

Query: 910  SELSPKQSEFWSTLSHGAKTWVFCGSALSSMDLCYMVKFASNCGATVAKFWRPDVTHVIT 731
            S  + K    W++ S G   W FCGSALS+ +   +VKFA   GATV+K W+PDVTHVI 
Sbjct: 438  SSRNQKDLSNWASASDGVNKWTFCGSALSAEERNILVKFAKLTGATVSKLWKPDVTHVIA 497

Query: 730  TTNANGACTRTMKVLMAILHGRWIVSMDWIKSCAAANRPLDEKHYEIALDNHGARDGPKT 551
            +T+ NGACTRT KVLM IL+G WI++MDW+K C     PL+E+ YEIALDN+G  DGPKT
Sbjct: 498  STDENGACTRTYKVLMGILNGIWILNMDWVKDCMKEKCPLNEEAYEIALDNYGCTDGPKT 557

Query: 550  GRYLALNNGPKLFGNLVFYFSGDXXXXXXXXXXXXXXXAGGTSVEKKELLVPQSCDIDGT 371
            GR   LN  PKLF  L FYF+GD               AGGT +E +EL    S D    
Sbjct: 558  GRLRVLNKEPKLFIGLSFYFTGDFPPAYEEDLQDLVITAGGTVLEDEELAATSSND-QAA 616

Query: 370  SRTLIVYKADQ---CTSGDKDCYVLEIPKEAQDLALRIGSRVIQHTWILESIAACKLQP- 203
             + ++VY  D    C  G++   + +   EA+ +A ++G++VI HTW++ESIA   LQP 
Sbjct: 617  PKVVVVYNLDSPGGCKVGEEVSILWQRMNEAEGIAAKVGAQVIGHTWLVESIAMGSLQPF 676

Query: 202  LSC 194
            +SC
Sbjct: 677  VSC 679


>ref|XP_004151994.1| PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 1 homolog [Cucumis
            sativus]
          Length = 679

 Score =  213 bits (543), Expect = 4e-53
 Identities = 113/243 (46%), Positives = 149/243 (61%), Gaps = 4/243 (1%)
 Frame = -2

Query: 910  SELSPKQSEFWSTLSHGAKTWVFCGSALSSMDLCYMVKFASNCGATVAKFWRPDVTHVIT 731
            S  + K    W++ S G   W FCGSALS+ +   +VKFA   GATV+K W+PDVTHVI 
Sbjct: 438  SSRNQKDLSNWASASDGVNKWTFCGSALSAEERNILVKFAKLTGATVSKLWKPDVTHVIA 497

Query: 730  TTNANGACTRTMKVLMAILHGRWIVSMDWIKSCAAANRPLDEKHYEIALDNHGARDGPKT 551
            +T+ NGACTRT KVLM IL+G WI++MDW+K C     PL+E+ YEIALDN+G  DGPKT
Sbjct: 498  STDENGACTRTYKVLMGILNGIWILNMDWVKDCMKEKCPLNEEAYEIALDNYGCTDGPKT 557

Query: 550  GRYLALNNGPKLFGNLVFYFSGDXXXXXXXXXXXXXXXAGGTSVEKKELLVPQSCDIDGT 371
            GR   LN   KLF  L FYF+GD               AGGT +E +EL    S D    
Sbjct: 558  GRLRVLNKESKLFIGLSFYFTGDFPPAYEEDLQDLVITAGGTVLEDEELAATSSND-QAA 616

Query: 370  SRTLIVYKADQ---CTSGDKDCYVLEIPKEAQDLALRIGSRVIQHTWILESIAACKLQP- 203
             + ++VY  D    C  G++   + +   EA+ +A ++G++VI HTW++ESIA   LQP 
Sbjct: 617  PKVVVVYNLDSPGGCKVGEEVSILWQRMNEAEGIAAKVGAQVIGHTWLVESIAMGSLQPF 676

Query: 202  LSC 194
            +SC
Sbjct: 677  VSC 679


>ref|XP_003520608.1| PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 1 homolog [Glycine
            max]
          Length = 678

 Score =  203 bits (516), Expect = 5e-50
 Identities = 110/219 (50%), Positives = 139/219 (63%), Gaps = 4/219 (1%)
 Frame = -2

Query: 847  VFCGSALSSMDLCYMVKFASNCGATVAKFWRPDVTHVITTTNANGACTRTMKVLMAILHG 668
            VFCGSALS+ +   ++ +AS  GATV KFW  +VTHVI  T+A+GAC+RT+KVLMAIL+G
Sbjct: 458  VFCGSALSNEEKVLLINYASKVGATVTKFWTSNVTHVIAATDAHGACSRTLKVLMAILNG 517

Query: 667  RWIVSMDWIKSCAAANRPLDEKHYEIALDNHGARDGPKTGRYLALNNGPKLFGNLVFYFS 488
            RW++ MDWIK+C     P++E+ YEI LDN G + GPK GR  AL N PKLF  L FYFS
Sbjct: 518  RWVLKMDWIKACMEEVNPVEEEPYEINLDNQGCQGGPKAGRLRALANEPKLFNGLKFYFS 577

Query: 487  GDXXXXXXXXXXXXXXXAGGTSVEKKELLVPQSCDIDG-TSRTLIVYKADQ---CTSGDK 320
            GD                GGT +  KE L  Q  +  G +S+ LIVY  D    C  G++
Sbjct: 578  GDYVSTYKEDLEELIEVGGGTVLRSKEELESQRHECKGDSSQLLIVYNLDPPQGCKLGEE 637

Query: 319  DCYVLEIPKEAQDLALRIGSRVIQHTWILESIAACKLQP 203
               + +   +A+DLA     +VI HTWILESIAACKLQP
Sbjct: 638  VSILWQRLNDAEDLAANT-LQVIGHTWILESIAACKLQP 675


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