BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00030437
         (498 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...   155   3e-36
emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]   153   2e-35
gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptas...   135   4e-30
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...   134   8e-30
ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [S...   133   2e-29

>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
           At1g65750-like [Vitis vinifera]
          Length = 820

 Score =  155 bits (392), Expect = 3e-36
 Identities = 75/164 (45%), Positives = 108/164 (65%)
 Frame = +3

Query: 6   SEAAVMKRILNRYADISGQVINFNKSTITFSPNTKEEERRVICDQLEVSEVHNPGKYLGL 185
           SE+  +K+IL RY ++SGQ IN NKS +TFS NT +  +R IC  L+V E  +PG YLG+
Sbjct: 162 SESRSLKQILLRYQNLSGQEINLNKSALTFSRNTDDVVKRGICSILQVEEXADPGIYLGM 221

Query: 186 PMKIGRGKVSELGFLVDRIELKLQTWSKHHISKAGKLTLLKTAAQSIPNFWMNLLLLPLD 365
           P  +G+ K     F+  ++  ++Q W+   +S+AGK   LKT AQSIP + M LLLLP D
Sbjct: 222 PAVVGKNKRQLFEFVRRKVWNRIQNWNGRRLSRAGKEICLKTVAQSIPTYVMQLLLLPKD 281

Query: 366 ICDTIEKKMNSFWWLNGGRSTGIKWLAWEKLCEIKEAGGLGFKK 497
           +C  IE  MN F+W +  +   I+W++W K+C+ K+ GGLGF+K
Sbjct: 282 LCRDIESMMNGFFWDSNPQCRSIRWMSWGKMCKQKKDGGLGFRK 325


>emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]
          Length = 1793

 Score =  153 bits (386), Expect = 2e-35
 Identities = 74/164 (45%), Positives = 107/164 (65%)
 Frame = +3

Query: 6    SEAAVMKRILNRYADISGQVINFNKSTITFSPNTKEEERRVICDQLEVSEVHNPGKYLGL 185
            SE+  +K+IL RY ++SGQ IN NK  +TFS NT +  +R IC  L+V E  +PG YLG+
Sbjct: 1249 SESRSLKQILLRYQNLSGQEINLNKXALTFSRNTDDVVKRGICSILQVEEQADPGIYLGM 1308

Query: 186  PMKIGRGKVSELGFLVDRIELKLQTWSKHHISKAGKLTLLKTAAQSIPNFWMNLLLLPLD 365
            P  +G+ K     F+  ++  ++Q W+   +S+AGK   LKT AQSIP + M LLLLP D
Sbjct: 1309 PAVVGKNKRQLFEFVRRKVWNRIQNWNGRRLSRAGKEICLKTVAQSIPTYVMQLLLLPKD 1368

Query: 366  ICDTIEKKMNSFWWLNGGRSTGIKWLAWEKLCEIKEAGGLGFKK 497
            +C  IE  MN F+W +  +   I+W++W K+C+ K+ GGLGF+K
Sbjct: 1369 LCRDIESMMNXFFWDSNPQXRSIRWMSWXKMCKQKKDGGLGFRK 1412


>gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 653

 Score =  135 bits (339), Expect = 4e-30
 Identities = 74/165 (44%), Positives = 103/165 (62%), Gaps = 2/165 (1%)
 Frame = +3

Query: 6   SEAAVMKRILNRYADISGQVINFNKSTITFSPNTKEEERRVICDQLEVSEVHNPGKYLGL 185
           +E   +K IL+ YA+ S Q+IN  KS I FS N    ++  + + L VSE     KYLGL
Sbjct: 286 NETRALKDILDTYANASDQLINMQKSEIYFSRNVPVTKKNTLSNMLWVSEGIGIRKYLGL 345

Query: 186 PMKIGRGKVSELGFLVDRIELKLQTWSKHHISKAGKLTLLKTAAQSIPNFWMNLLLLPLD 365
           P  IGR K S   ++ DRI  ++   S   +S+AGK  L+K+ AQ+IP++ M++ LLP  
Sbjct: 346 PSMIGRSKKSIFNYIKDRIWNRISGLSSKMLSQAGKEVLIKSVAQAIPSYCMSVFLLPHS 405

Query: 366 ICDTIEKKMNSFWW--LNGGRSTGIKWLAWEKLCEIKEAGGLGFK 494
           I D IEK +NSFWW   N GR  GI+W++WE+L   KE GG+GF+
Sbjct: 406 IADDIEKMLNSFWWGMKNEGRG-GIRWMSWERLTMRKEWGGMGFR 449


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score =  134 bits (337), Expect = 8e-30
 Identities = 66/164 (40%), Positives = 94/164 (57%)
 Frame = +3

Query: 3    GSEAAVMKRILNRYADISGQVINFNKSTITFSPNTKEEERRVICDQLEVSEVHNPGKYLG 182
            G EA  ++ IL  Y + SGQVIN +KS + FSPNT   E+R +   L +       +YLG
Sbjct: 949  GGEAQQLQTILQIYEECSGQVINKDKSAVMFSPNTSSLEKRAVMAALNMQRETTNERYLG 1008

Query: 183  LPMKIGRGKVSELGFLVDRIELKLQTWSKHHISKAGKLTLLKTAAQSIPNFWMNLLLLPL 362
            LP+ +GR +     +L +RI  ++Q W +  +S+AGK  L+K  AQ+IP F M    L  
Sbjct: 1009 LPVFVGRSRTKIFSYLKERIWQRIQGWKEKLLSRAGKEILIKAVAQAIPTFAMGCFELTK 1068

Query: 363  DICDTIEKKMNSFWWLNGGRSTGIKWLAWEKLCEIKEAGGLGFK 494
            D+CD I K +  +WW N  +   + WL+W KL   K  GGLGF+
Sbjct: 1069 DLCDQISKMIAKYWWSNQEKDNKMHWLSWNKLTLPKNMGGLGFR 1112


>ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [Sorghum bicolor]
           gi|241926916|gb|EES00061.1| hypothetical protein
           SORBIDRAFT_03g001780 [Sorghum bicolor]
          Length = 631

 Score =  133 bits (334), Expect = 2e-29
 Identities = 63/163 (38%), Positives = 100/163 (61%)
 Frame = +3

Query: 6   SEAAVMKRILNRYADISGQVINFNKSTITFSPNTKEEERRVICDQLEVSEVHNPGKYLGL 185
           S+A  ++RIL+ Y   SGQVIN  KS++ FSPNT + +R ++   L +++  +  KYLGL
Sbjct: 275 SDALELRRILDVYEKASGQVINKEKSSMMFSPNTGQHDRSLMRSNLSITDEASTEKYLGL 334

Query: 186 PMKIGRGKVSELGFLVDRIELKLQTWSKHHISKAGKLTLLKTAAQSIPNFWMNLLLLPLD 365
           P+ IG+ +     ++  +I  ++Q W +  +SKAGK  L+K  AQSIP + M+   L   
Sbjct: 335 PVNIGKSRKKPFEYIKKKIWSRIQGWQEKLLSKAGKEILIKAVAQSIPTYAMSCFDLTKG 394

Query: 366 ICDTIEKKMNSFWWLNGGRSTGIKWLAWEKLCEIKEAGGLGFK 494
           +CD +   +  +WW    ++  I W++WEKL + KE GGLGF+
Sbjct: 395 LCDELSSIIGRYWWSQQDKANKIHWISWEKLTQSKEKGGLGFR 437